Tfer012511.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tachina fera
Gene Symbol
nfxl1
Assembly
GCA_905220375.1
Location
LR999964.1:40614964-40618259[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 3 4.7e+04 -8.1 6.4 15 19 156 160 155 160 0.82
2 17 0.2 3.1e+03 -0.3 0.4 4 10 191 197 190 197 0.95
3 17 2.7e-08 0.00043 21.6 16.0 1 18 205 221 205 222 0.98
4 17 2.8 4.4e+04 -4.0 2.3 6 10 248 252 247 252 0.88
5 17 6.1e-05 0.96 10.9 13.3 3 19 260 277 258 277 0.90
6 17 5.8e-09 9.2e-05 23.7 12.8 1 19 312 330 312 330 0.99
7 17 1.2 2e+04 -2.9 0.5 1 8 355 361 354 362 0.50
8 17 0.00024 3.7 9.0 13.8 1 18 365 382 365 383 0.95
9 17 8.2e-06 0.13 13.7 16.5 1 18 417 434 417 435 0.97
10 17 2.4e-10 3.7e-06 28.2 14.5 1 19 444 462 444 462 0.98
11 17 0.14 2.2e+03 0.1 10.8 9 19 507 517 498 517 0.88
12 17 0.02 3.1e+02 2.9 5.1 4 11 531 538 529 539 0.89
13 17 0.49 7.7e+03 -1.6 0.9 6 10 598 602 597 602 0.90
14 17 4.9e-06 0.077 14.4 4.5 1 11 608 618 608 619 0.96
15 17 3 4.7e+04 -4.6 2.1 15 19 632 636 632 636 0.86
16 17 0.0082 1.3e+02 4.1 16.5 3 18 648 663 647 664 0.91
17 17 3.3e-07 0.0052 18.1 12.3 1 18 715 734 715 735 0.91

Sequence Information

Coding Sequence
ATGCCGCCacctaaaataaaacaacaaaactgTGCTAAAAATCCAACTGAAAAATTCAATGAGGCTCATGCAAGAAACATAGAAATTGCTAAAAAGATGGTTGAAAATTATGTATCATCTGAAGATGAGGACGAATTAGATGAGACAACGATTTTAGaTTCGCTTTATCAGCATTACAGTGCGCGCAAAGAAGATTCGCATCTTTTAGCGAAGACTTCAGgatttttagaaaatgttttacAAAGTGGAGCAGCTACGTGTCTTATTTGTATTGGCAGCATTAAGCGATCAAATGCAATATGGTCTTGcaaatattgttattgtttatttcatttgaacTGCATTCAAAGATGGTCTAATGACAGTATGGCACAAGCAAAAGCTCAAAGTCAAAATGATCAGGGTTACTACAATCATATGGGAGAATATGTACCACCTCAAAAACCGAAAGCATTACATTGGTGTTGTCCCCAGTGTAGAAAGGAATTTGGAATACATGAGAAACCAACGGAATATGAATGTTTTTGTGGCAAAGAAACTAATCCGCCATCGCAACCCTGGTTAGTTCCGCATTCTTGTGGCGAAATCTGTGGAAAATCTCTAATACCTAATTGCGGCCATAAGTGTACATTGCTATGCCATCCTGGTCCATGTCCACCTTGTGCCCAATATGCTATTACATCTTGTAAGTGTGGGAAATCTGCTCCAAAATCTGTGCGTTGTGTTGATAAGTTCTGGGAGTGTCAGAAGAAATGTGAATTATTATTGTCATGCAAGGAGCATCTGTGTAAGCAACTATGTCACAAAGTCGGGCAATGTCCGCCTTGCCAACAAACAAGCTTACAACCATGTGAATGTGGCAGAGAAACTGCAAAACGCCAATGCTGTGAACAGAAATGGCACTGTAAAAAACGTTGTGAGAAAACTTTTGAGTGCGGCTTGCACAGTTGCGAACAAATTTGTCATTCAGGAGATTGTGGGGATTGTCCTTTAAGTTTGCCACGATTCTGTCCATGTGGTAAAACtAAAAAAGTTGGTCCATGTTTTGAGATGATAGATACTTGCGGCGATACTTGCCAAAAAGTTCTTGCATGTGGCTTACACACTTGCACACAACGTTGCCACAAAGATTGTTGTAATTTGTGTTTACtcacaacaaaaaagaaatgcCGCTGTGGTATGCGCGAAAAGGAGTTACCATGTTCCAaggaatttatttgtgaaacgaaatgtaaacaaataagaGACTGTAGCAAGCATCCCTGCAATCGTAAGTGCTGTGATGGAAATTGTCCACCATGTGACAAAGTGTGCGGCAAGCCATTGTCGTGTGGTAAGCACAAATGCCAATCAATTTGCCACAAAGGACCTTGCTACCCTTGCCAGCAAAAATCTCAAATCAATTGTCGCTGtggaaaatccaaaaaaagtgttCCTTGCGGTCGAGAGCGTACGGCACGTGTGATTTGTTTGGAACCATGTCGtaTTCCTTCAAAATGTCATCATGAGAATAAACATCGCTGTCATAAAAATGAGTGTCCACCTTGTTCGGCAACATGCAATTTGCCAAATGATACCACCAATTGCGACCATAAGTGTATGGCAAAATGTCATGCAGCTGTTAGAGTAGCTAAAAAAGCAAATGTTGATGCTAAAAGCATATGGGAACCTACTAAGCAGTTTGAATTAAAGGCAATGCCTCATCCGCGGTGTGAACAAAAAGTAAGCGTAACTTGTATTGGTGGTCATGAAACGGCTGAGTGGCCCTGTTGGAATTCTAAGCCTACATCATGTCAACGTTTGTGTAACCGCTCTCTGCGTTGTGGAAATCACAAATGTGCTTTAGTCTGTCACGCTGTAGCTATTTTGGAAGACATGACGgaaCAAGCTGGATGTTCTCCATGCCGCGAAGGCTGCATTATTCCTCGCCCCGAAGGATGTACTCATACATGTCCTAGACCTTGCCACCAACCACCTTGTAATAGTTGCAATATTGCTATAAAAACAAAGTGTCATTGTGACTTAATGCCCATTGTTTACAAATGCAGCGATTATTTCGATACAGAAGCGAGTGAAGGTGAAATTTTGGagaaaagagaaaatttaaaaagctgCGGAAATAgatgtttaaaaaattaCCCTTGTGGCCATCGCTGTGCAGCTAAATGTCATTCTGGTCCTTGCCCGTATCCCGAATCATGTCGCAAAAAAGTGCGTATCTACTGTGATTGTAAACGATTCAAGTATGATATTTCTTGCGACAAGCAACGTGCTGgtcttttaaaattgaattgcgatgaaaattgttttgaaacacaaaaaaatttagaacaaGTACGACAGGAAGAAGAGCTCCTTCGAAGAAAACAAGAGGAAGAACGCAATCGCTTAGAGGTGGAGcaatttgaaaagaaatttagCAAACGCAAACCCAAAGAACGTAAAACATTAGAAGTGAAACAAAAAGATCCCATCAATTGGAAACTATTTGGAGTTTATGCTATTATTGCAGCAGCTGTGTTATTAGCGGTTGTTTTAGCTTTTTATGAGGATCGTTAG
Protein Sequence
MPPPKIKQQNCAKNPTEKFNEAHARNIEIAKKMVENYVSSEDEDELDETTILDSLYQHYSARKEDSHLLAKTSGFLENVLQSGAATCLICIGSIKRSNAIWSCKYCYCLFHLNCIQRWSNDSMAQAKAQSQNDQGYYNHMGEYVPPQKPKALHWCCPQCRKEFGIHEKPTEYECFCGKETNPPSQPWLVPHSCGEICGKSLIPNCGHKCTLLCHPGPCPPCAQYAITSCKCGKSAPKSVRCVDKFWECQKKCELLLSCKEHLCKQLCHKVGQCPPCQQTSLQPCECGRETAKRQCCEQKWHCKKRCEKTFECGLHSCEQICHSGDCGDCPLSLPRFCPCGKTKKVGPCFEMIDTCGDTCQKVLACGLHTCTQRCHKDCCNLCLLTTKKKCRCGMREKELPCSKEFICETKCKQIRDCSKHPCNRKCCDGNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKSKKSVPCGRERTARVICLEPCRIPSKCHHENKHRCHKNECPPCSATCNLPNDTTNCDHKCMAKCHAAVRVAKKANVDAKSIWEPTKQFELKAMPHPRCEQKVSVTCIGGHETAEWPCWNSKPTSCQRLCNRSLRCGNHKCALVCHAVAILEDMTEQAGCSPCREGCIIPRPEGCTHTCPRPCHQPPCNSCNIAIKTKCHCDLMPIVYKCSDYFDTEASEGEILEKRENLKSCGNRCLKNYPCGHRCAAKCHSGPCPYPESCRKKVRIYCDCKRFKYDISCDKQRAGLLKLNCDENCFETQKNLEQVRQEEELLRRKQEEERNRLEVEQFEKKFSKRKPKERKTLEVKQKDPINWKLFGVYAIIAAAVLLAVVLAFYEDR*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01399151;
90% Identity
iTF_01075059;
80% Identity
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