Stae027572.1
Basic Information
- Insect
- Sphaerophoria taeniata
- Gene Symbol
- sip1
- Assembly
- GCA_943591125.1
- Location
- CALSBT010000219.1:1748468-1751176[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-92 5.9e-88 296.2 15.9 2 275 388 654 387 654 0.97 2 2 0.058 1.2e+03 0.0 0.1 157 190 666 698 659 708 0.62
Sequence Information
- Coding Sequence
- ATGTCTGGAAACGAGTACGAAGCTTTTGAAGTTACCGACTACGATTTGGCTAATGAATTCAATATAAACCGTCCACGCAGAAAACTAACAAAAAATCAACAAATTTATGGAATATGGGCTGATAGTGATAGTGACGCCGACAGCGAGGTCGAAATGAAAGGCCGACGGGCTGGCAAAAGTGGTCGGAACACTGGACCTGTGAATTTTGTCACCGGAGGCATTCAACAATCGGGGAATTTAAACAAAGCCGAGACCAACCGTGACGATGATCAAATCACAGACGAAGACGATGAATGTCCATCGAACAGTCGGGAGGTGCAAGGCAAAAACAGTGCCAGTAATTCTTCGTCTGAAGAGGAGTCATCCAAACCGACAAGAATGGGATTCGGAATGAAACAGCAACAGCATGCGCCCAGTAATAAGCCCGTCGGAGCTTGGGAACAACACACCAAAGGCATTGGTGCCAAGTTGCTTCTTCAGATGGGTTATAAGCCAGGCATGGGATTGGGAAAAGATCTTCAAGGTATTGCTCAGCCGGTCCAGGCGACTTTGCGCAAAGGACGCGGAGCTATCGGTGCTTATGGTCCAGAAACTCCGCAAACCATTGGTGATCCTGGACAGAACAAACAAATCGAAAATGACGAGCCCAAGGAATACAAAGAAAAAAATGACAAATGGAAGAAGTCGGACGGGAAAAAAGATTCCCGCAAGAATCGCTACCAGTATCGCAGTGTTGAAGAAGTAATCGAAAAAGGAAAGAAACAATATGGCGGACTTCTGCCGGGCAAGCTGAGCAAGAAACTCGGCAATGTGCCTGTGATTGACATGACCGGCCCGGAAAAGCGTGTCCTTAGTGGCTACCAAGCTCTCGGGCAGACCAAAATCATCGATGACGACCTCTTCGAAGCGTCAAAGAAATCCACTGGATTTGCCTTGCCCGAATTGATGCATAATCTAAACTTAATTGTGAACCAGTGCGAACAAGAAATCATCTCACTTGACACAGCAGGCCGAGAAGCCACAGACAGATATCAAGCACTTGAGTCGGAGAAAAAAAATCTAGAAAAAATTGTTCGTCTAGAGGAAGATCACATTGGGACTCTGGAAAAGGCCTTAGCTTTGGTGGAGGAACTGACTTCGGATGTAGAAAGCTTGTCCCTCTCCCGAGCAGAGAAAATCTTCATCGAGCTGCAGAGAGATTTCGCCGCCGAATACAAGGAATTTGCATTAGGAGACCTTGCAGCCGGTGTGATTGCGCCTCTAGTTAATAATGAATTGAAAAATTGGAATCCTCTGGAAAATCCAGTTAAATTCATTGAAACCATTAAAAAATGGCGAACTATTCTCGACATGCATCCGTCAGGACAGCGTAACAATGTCTTCGATCCCTACTCGTCGCTAGTTTGGGCTGGAGTCATTCCCAGCTTCAGAGCATCGGTCAGCGAATGGAACCCCAAATCGCACCAAAAAATGGCAGCTCTGCTTGACAGTTGGGCGCCGCTCTTCCCCACTTGGATACTGGATAATGTCCTCGAACAGTTGGTTTTGCCGCAATTAGTTGCCGCTGTCAATGAATGGGATCCCCTAACCGACACCATTCCGATTCATAGTTGGATTCTACCATGGAATACAATATTGGGACACAAAATGGAGGAGCACATCTTCCCGACGATTCGCGATAAATTAGGTTTCGCACTGCAGGCTTGGACTCCGCACGACAGATCGGCCCGGGCGATGATCACACCTTGGAAGGGTGCTTTTGATGAGAGTGAAATGCAAGCGTTCTTGGTGAAGCATATAATTCCAAAGCTGCAGATGTCATTGAATGAATTGATCATAAATCCCCTACAGCAGGACTTAGAACTCTGGAATCAAGTGTGGGAATGGAATGAATTGATACCAACACTGCTCATGGCACAGATGCTGGATAAATACTTCTTCCCTAAATGGATGCAGGTTCTTGTTCTCTGGCTCAATCAATCTCCAGACTTCGAGCAAATCTCCCGCTGGTACACCGGTTGGAAATCGGTTCTCGGTGAGGAGATGTTGAAACAGCCAATGATCAAGGAACATCTGCGGCGCGCCTTGGAAATGATGCACAGAGCCACAGAAGCAATAACAGCAACACCGCAGCCAGTGCCGACACCAGTTGCACCACCACACCCATCAATACCGTCCCCATCCTCCACAACAACGGCGTCTGGTTTGAATCCACCTCCAGCACTGATGGATCTCCAAATCGTACCTCCTGTTCAATTAGAATTTAAAGAGCTCGTTTCACAGAAATGCTCCGAACGTGGTATTATTTTTGCTCCGATGCCAGGACGTCGAGAATTTGGCAAACAGGTTTATCGTGTTGGAAAGTTGTTTTGCTACATCGATCGGAATGTAGTAATGTTGAGTGACGGTAGTTTGAAGAACTGGACTCCGACGTCTCTAGGACTTACAATAGAGAGAGCTATATCTGGTTGA
- Protein Sequence
- MSGNEYEAFEVTDYDLANEFNINRPRRKLTKNQQIYGIWADSDSDADSEVEMKGRRAGKSGRNTGPVNFVTGGIQQSGNLNKAETNRDDDQITDEDDECPSNSREVQGKNSASNSSSEEESSKPTRMGFGMKQQQHAPSNKPVGAWEQHTKGIGAKLLLQMGYKPGMGLGKDLQGIAQPVQATLRKGRGAIGAYGPETPQTIGDPGQNKQIENDEPKEYKEKNDKWKKSDGKKDSRKNRYQYRSVEEVIEKGKKQYGGLLPGKLSKKLGNVPVIDMTGPEKRVLSGYQALGQTKIIDDDLFEASKKSTGFALPELMHNLNLIVNQCEQEIISLDTAGREATDRYQALESEKKNLEKIVRLEEDHIGTLEKALALVEELTSDVESLSLSRAEKIFIELQRDFAAEYKEFALGDLAAGVIAPLVNNELKNWNPLENPVKFIETIKKWRTILDMHPSGQRNNVFDPYSSLVWAGVIPSFRASVSEWNPKSHQKMAALLDSWAPLFPTWILDNVLEQLVLPQLVAAVNEWDPLTDTIPIHSWILPWNTILGHKMEEHIFPTIRDKLGFALQAWTPHDRSARAMITPWKGAFDESEMQAFLVKHIIPKLQMSLNELIINPLQQDLELWNQVWEWNELIPTLLMAQMLDKYFFPKWMQVLVLWLNQSPDFEQISRWYTGWKSVLGEEMLKQPMIKEHLRRALEMMHRATEAITATPQPVPTPVAPPHPSIPSPSSTTTASGLNPPPALMDLQIVPPVQLEFKELVSQKCSERGIIFAPMPGRREFGKQVYRVGKLFCYIDRNVVMLSDGSLKNWTPTSLGLTIERAISG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01396514; iTF_01318244; iTF_00664070; iTF_00427149; iTF_00893877; iTF_00335038; iTF_00974662; iTF_01211942; iTF_00693836; iTF_00694632; iTF_00665631; iTF_00426336; iTF_00664832; iTF_00984233; iTF_00188109;
- 90% Identity
- -
- 80% Identity
- -