Llat016045.1
Basic Information
- Insect
- Leucozona laternaria
- Gene Symbol
- sip1
- Assembly
- GCA_932273905.1
- Location
- CAKNZR010000362.1:348635-351442[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.38 5.9e+03 -2.1 0.0 59 88 326 358 300 384 0.65 2 3 1.3e-91 2.1e-87 294.6 11.3 2 275 395 661 394 661 0.97 3 3 0.08 1.2e+03 0.1 0.0 157 191 673 706 666 716 0.78
Sequence Information
- Coding Sequence
- ATGTCTGGGAACGAATACGAAGCTTTTGAAATCACCGACTATGATTTGGCAAATGAATTCAATCCAAATAGACCAAGAAGAAAGTTGACAAAAAATCAACAAATTTATGGAATATGGGCTGATAGCGATAGTGATGGCGATAGCGACGTCGAAATGAAAGGTCGCCGTGCTCGTGCTGGCAAAACTCGCAGCTCTGGACCAGTAAGCTTTGTCACGGGTGGCATCCAGCAATCGGGAACTTTGGACAAAAACGAACGCAACCAAGATGATGATAATCAAATCACTGACGAAGAAGATGAAGATTCTTCACATCGTCGGGCAGTGCAGGGCAAAGATCCCGCCGACAGCGCCTCGAACTCCTCGTCCGAGGAGGAAGCAGCTCATCCAACACGCATGGGATTCGGAATGAAGCAGCGCCAGCCTGCTCCGAGCAGTAAGCCCGTCGGAGCATGGGAACAGCACACCAAGGGGATCGGAGCCAAGTTATTGCTTCAGATGGGCTACAAACCTGGCATGGGTTTGGGAAAAGATCTGCAGGGTATCGCACAACCTGTTCAGGCAACCTTGCGCAAAGGACGCGGGGCAATCGGTGCATATGGACCGGAAACCCCACAAACTGTTGGGGATCCTGGCCCAAGCAAACAAATCCAAGAACAGGATACCCAAGAACTCAAAGGCAATCTGAATAAGTGGAAGAGAGGCGAGACCAAGAAGGATCAGCGCAAAAATCGATACAATTACCGCTCCGTTGAGGAAGTCATCGAGAAAGGCAAGAAGCATCCGTGCGGCATCCTACCGGACAAGCTGAGCAAGAAACTCGGCAATGTGCCTGTGATCGACATGACTGGACCGGAGAAACGTGTCCTCAGTGGCTACCATGCCCTCGGACAGACAAAGATCATCGACGAAGATCTTTACGACCATCAGCCAGCAAAGAACTCAGCCGGATTCGCAATGCCCGAGTTGATGCACAATATGAATTTGATTGTGAACCAATGCGAGCAAGAAATAATTTCATTGGACACAACAGGACGTGAGGCTACCGACAAATATGAAGCTCTCGAGCACGAAAAGAAAAATCTCGAAGAGATAGTTCGATTAGAGGAAGATCACATCAACACTCTGGAGAAGGCTTTGACGCTGGTGGAGGAGCTCACCACGGACACGGAGAATCTGACTCTGGCCAGAGCAGAAAAGATCTTTATCGAGCTGCAACGGGACTTCGCCGCCGAATACAAGGAATTCGCGTTGGGCGATCTGGCAGCTGGGGTGATTGCGCCTTTGGTTAATATCGAACTGAAATCCTGGAATCCCCTGGAAGAACCACTTCGATTCATCGAAACCATCAAAAAATGGCGAACCATTCTCGACATGCATCCCTCGGGTCAGCGTAACAATGTGTTTGATCCCTACTCATCGCTGGTCTGGGCCGGAGTTATTCCCAGCTTCAGAGCATCGGTGAGCAACTGGAATCCCAAGGTGCACCAGAAGATGGCAGCACTGCTGGACTGTTGGGCACCGCTGTTTCCCACTTGGGTGCTGGACAATGTGCTCGAGCAGTTAATTCTGCCGCAATTGGTTGCCGGAGTCAATGAATGGGACCCACTAACAGACACCGTCCCGATTCATAGTTGGATTCTTCCCTGGAATACAATTCTGGGGCACAAAATGGAAGAGCAAATCTTCCCGACAATTCGCGAGAAGCTGGGATGTGCTCTACAGGGTTGGATTCCGCAAGACAGATCTGCTCGGGCGATGATCACACCGTGGAAGGGAGCATTCAACGAGGGGGAAATGCAGGCGTTTATGGTGAAGCACATCATTCCGAAGCTGCAAATGGCTTTGAATGATTTGATTATAAATCCACTACAGCAGGATTTGGAACTCTGGAATCAAGTATGGGAATGGAATGAACTCATACCACCTCTGCTAATGGGACAAATGCTGGACAAATACTTCTTCCCCAAATGGATGCAAGTTCTGGTGCTTTGGCTCAATCAAGCACCAGATTTTGATCAAATCTCCCGATGGTACACCGGATGGAAATCAGTTTTGGGAGAGGAGTTGTTGAAATTGCCAATGATCAAGGAACATCTGCGACGAGCTTTGGAAATGATGCACAGAGCCACAGAAACAATAGCCGCACCACAACCAGTACCCACACCACTGGCACCACCTCATCAAGCTTCAACATCATCATCCTCCTCGTCGACAGCAACAAGCTCTTCTACTAATCTTAATCCGCCGGCATTGATGGATCTACAAATAGCGCCTCCTGTGCAGTTGGAATTCAAGGAATTGGTTTCGCAGAAATGTGCAGAACGCGGTGTTATTTTCGCACCAATGCCAGGACGCAGAGAATTCGGCAAGCAGGTTTATCGAGTTGGGAAATTATTTTGCTATATCGATCGCAACGTGGTCATGTTGAGTGATGGAAGTTTGAAAAATTGGACCCCTACTTCACTAGGACTTACAATTGAAAGAGCTCTATCTGGATAA
- Protein Sequence
- MSGNEYEAFEITDYDLANEFNPNRPRRKLTKNQQIYGIWADSDSDGDSDVEMKGRRARAGKTRSSGPVSFVTGGIQQSGTLDKNERNQDDDNQITDEEDEDSSHRRAVQGKDPADSASNSSSEEEAAHPTRMGFGMKQRQPAPSSKPVGAWEQHTKGIGAKLLLQMGYKPGMGLGKDLQGIAQPVQATLRKGRGAIGAYGPETPQTVGDPGPSKQIQEQDTQELKGNLNKWKRGETKKDQRKNRYNYRSVEEVIEKGKKHPCGILPDKLSKKLGNVPVIDMTGPEKRVLSGYHALGQTKIIDEDLYDHQPAKNSAGFAMPELMHNMNLIVNQCEQEIISLDTTGREATDKYEALEHEKKNLEEIVRLEEDHINTLEKALTLVEELTTDTENLTLARAEKIFIELQRDFAAEYKEFALGDLAAGVIAPLVNIELKSWNPLEEPLRFIETIKKWRTILDMHPSGQRNNVFDPYSSLVWAGVIPSFRASVSNWNPKVHQKMAALLDCWAPLFPTWVLDNVLEQLILPQLVAGVNEWDPLTDTVPIHSWILPWNTILGHKMEEQIFPTIREKLGCALQGWIPQDRSARAMITPWKGAFNEGEMQAFMVKHIIPKLQMALNDLIINPLQQDLELWNQVWEWNELIPPLLMGQMLDKYFFPKWMQVLVLWLNQAPDFDQISRWYTGWKSVLGEELLKLPMIKEHLRRALEMMHRATETIAAPQPVPTPLAPPHQASTSSSSSSTATSSSTNLNPPALMDLQIAPPVQLEFKELVSQKCAERGVIFAPMPGRREFGKQVYRVGKLFCYIDRNVVMLSDGSLKNWTPTSLGLTIERALSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01356876;
- 90% Identity
- iTF_00664832;
- 80% Identity
- -