Spyr013146.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaeva pyrastri
Gene Symbol
sip1
Assembly
GCA_905146935.1
Location
LR989927.1:38801183-38803899[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.84 1.4e+04 -3.8 0.0 65 88 335 358 301 383 0.60
2 3 2.8e-92 4.6e-88 296.2 14.1 2 275 395 661 394 661 0.97
3 3 0.26 4.3e+03 -2.1 0.0 160 190 676 705 668 715 0.54

Sequence Information

Coding Sequence
ATGTCTGGAAATGAATATGAAGCATTTGAAATCACCGACTATGACTTGGCAAACGAATTCAATCCAAATCGACCGCGAAGGAAGCTGACGAAAAATCAACAAATTTATGGAATATGGGCCGATAGCGATAGTGATGCTGACAGCGAGGTTGAAATGACCGGACGTCGTCGGCGTGGTGCTAGTAAAGGTCGTAATTTAGGACCAGTTAACTTTGTCACAGGCGGGATCCAGCAATCGGGAAGTTTTAAGAAAGCTGACCAGGAAGACGATAATCAAATAACCGATGAAGAGGATGAGGATTCATCACATCGCCGAGCAGTCCAGAGCAAAGATCAGGCAGACAGCGCTTCAAATTCTTCGTCCGAGGAGGAGGCAGCTAACCCGACACGCATGGGCTTTGGGATGAAGCAACGCCAGCCTGCCGCGAGCAATAAGCCTGTGGGAGCATGGGAACAACACACCAAAGGAATCGGAGCCAAATTGTTGCTTCAGATGGGTTACAAGCCTGGCATGGGCTTGGGCAAAGATCTGCAAGGTATCGCACAACCAGTGCAAGCTACTTTACGGAAAGGACGTGGAGCAATTGGCGCCTATGGACCGGAAACACCACAAACTGTCGGGGACCCTGGCCAGAGCAAGCAAATCGATGACGAAGACCCCAAAGAATACAGCAAAGGCAAATTGAATAGATGGAGGAAAGGTGACAACAAGAAGGACTTAAAGAAAAACCGCTACAATTATCGCTCAGTCGAGGAGGTCATCGAGAATAGCAAGAAGCATCCGATTGGTATCTTGCCGGACAAGTTGAGTAAGAGACTGGGAAATGTGCCTGTGATCGACATGACTGGGCCGGAGAAACGCGTCCTGAGTGGGTACCACGCCCTCGGACAGACAAAGGTCGTTGACGAGGAACTCTATGATCATCAGCCAGTAAAGAAGACAAACGGATTCGCACTGCCAGAGTTGACGCACAACTTGAATTTAATTGTCAACCAATGCGAGCAGGAAATCATTTCACTGGACACTTCAAGTCGTGAGGCCAAAGAGAAATACGAAACTCTCGAGCACGAGAAGAAAAATCTTGAAAAGATAGTTCGATTGGAGGAAGACCACATAAAGACTTTGGAGAAGGCCCTGGCTCTGGTAGAGGAGCTCACTACGGACTCGGAAAATCTAACTCTGGCCAGAGCAGAAAAAATCTTTATTGAGCTGCAACGGGACTACGCTGCAGAATACAAGGAGTTCGAATTGGGGGATCTGGCAGCTGGTGTGATTGCGCCTTTGGTCAATATAGAACTGAAGTCCTGGAATCCTCTAGAGGATCCGCTTCGATTCATAGAAACAATCAAGAAATGGCGAACCATCCTGGACATGCATCCCTCAGGACAGCGAAACAACGTTTTCGATCCCTATTCTTCGTTAGTCTGGGCCGGGGTTATTCCCAGCTTCAGAGCGTCGGTAGCCAACTGGAACCCCAAAGTTCACCAGAAGATGGCAGCCCTGCTGGACTGTTGGGCACCACTGTTTCCTACTTGGGTTCTAGACAATGTCCTCGAGCAATTGATTCTGCCACAATTGGTTGCAGCAGTGAACGAATGGGACCCACTAACAGACACCATCCCTATCCACATTTGGATTCTTCCCTGGAATACGATTTTGGGGCACAAGATGGAGGAGCACATCTTCCCAACAATACGAAAGAAATTGGGATTTGCTCTACAAGCATGGACGCCGCAAGACCGATCGGCGCGGGCCATGATCACTCCTTGGAAAGGTGCATTCGAAGAAAGAGAAATGCAGGCCTTCGTGCAGAAGCACATCATTCCCAAGCTGCAGATGGCTCTGAATGATTTGATTATAAATCCACTGCAACAGGACTTGGAATTATGGAATCAGGTGTGGGAATGGAATGAAATTATTCCCCCTCTGATTATGGGCCAAATTCTCGATAAATTCTTTTTCCCCAAATGGATGCAAGTTTTAGTGCTTTGGCTAAATCAGGCGCCAGATTTTGACCAAATCTCACGATGGTACACGGGATGGAAATCTGTTTTTGGTGAGGAGATACTAAAATTGCCAATGATCAAGGAACATCTACGACGTGCGTTGGAAATGATGCACCGAGCCACAGAAACAATCGCTACACCTCAACCAGTGCCCACACCAGTAGCACCACCTCAGGCGACATCGTCATCAGCTGCTAATCTAAACCCTCCGGCCTTGATGGATCTTCAAATATCACCTCCGGTGCAGTTAGAGTTCAAGGAATTAGTTTCGCAAAAATGTGCAGAACGTGGTATTATTTTTGCACCAATGCCAGGTCGCAGAGAATTCGGCAAGCAGGTGTATCGAGTGGGGAAGCTGTTCTGCTACATCGATCGAAATGTTGTGATGTTAAGTGACGGAAATTTGAAAAATTGGACACCAACTTCATTGGGTCTTACCATAGAAAGAGCTGTATCTGGATGA
Protein Sequence
MSGNEYEAFEITDYDLANEFNPNRPRRKLTKNQQIYGIWADSDSDADSEVEMTGRRRRGASKGRNLGPVNFVTGGIQQSGSFKKADQEDDNQITDEEDEDSSHRRAVQSKDQADSASNSSSEEEAANPTRMGFGMKQRQPAASNKPVGAWEQHTKGIGAKLLLQMGYKPGMGLGKDLQGIAQPVQATLRKGRGAIGAYGPETPQTVGDPGQSKQIDDEDPKEYSKGKLNRWRKGDNKKDLKKNRYNYRSVEEVIENSKKHPIGILPDKLSKRLGNVPVIDMTGPEKRVLSGYHALGQTKVVDEELYDHQPVKKTNGFALPELTHNLNLIVNQCEQEIISLDTSSREAKEKYETLEHEKKNLEKIVRLEEDHIKTLEKALALVEELTTDSENLTLARAEKIFIELQRDYAAEYKEFELGDLAAGVIAPLVNIELKSWNPLEDPLRFIETIKKWRTILDMHPSGQRNNVFDPYSSLVWAGVIPSFRASVANWNPKVHQKMAALLDCWAPLFPTWVLDNVLEQLILPQLVAAVNEWDPLTDTIPIHIWILPWNTILGHKMEEHIFPTIRKKLGFALQAWTPQDRSARAMITPWKGAFEEREMQAFVQKHIIPKLQMALNDLIINPLQQDLELWNQVWEWNEIIPPLIMGQILDKFFFPKWMQVLVLWLNQAPDFDQISRWYTGWKSVFGEEILKLPMIKEHLRRALEMMHRATETIATPQPVPTPVAPPQATSSSAANLNPPALMDLQISPPVQLEFKELVSQKCAERGIIFAPMPGRREFGKQVYRVGKLFCYIDRNVVMLSDGNLKNWTPTSLGLTIERAVSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01356876;
90% Identity
-
80% Identity
-