Maur010354.1
Basic Information
- Insect
- Meliscaeva auricollis
- Gene Symbol
- sip1
- Assembly
- GCA_948107695.1
- Location
- OX403619.1:46975484-46978321[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.14 1.7e+03 -1.3 0.0 40 88 306 359 300 375 0.73 2 3 3.3e-91 3.9e-87 292.7 14.2 2 275 396 662 395 662 0.97 3 3 0.042 4.9e+02 0.5 0.0 157 191 674 707 667 718 0.77
Sequence Information
- Coding Sequence
- ATGTCTGGAAACGAATATGAAGCATTTGAAATCACCGACTTTGATTTGGCAAATGAATTCAATCCAAATCGACCACGAAGGAAGTTAACAAAGAATCAACAAATTTATGGAATATGGGCGGATAGTGATAGTGATGCCGATAGCGATGTTGAAATGAAGGGTCGACGTGCTGGGAAAAGTCGCAGTTCTGGTCCTGTGAACTTTGTCACTGGCGGCATCCAACAGACGAGTAGTTTTAAGAAAAACGAACTCAATGATGACGATAATCAAATCACTGACGAAGACGATGAAGGTCCATCAAATCGCCGAGCAGTGCAAGGCAAAGAACCCGCTGAAAGCGGTTCGAATTCCTCATGCGAAGAAGAGACAGGCAAACCAACACGCATGGGCTTCGGAATGAAATCACAAAAGCCATCTACAAGTTCAAAACCAGTTGGAGCATGGGAACAGCACACCAAGGGTATCGGAGCTAAATTGTTGCTTCAGATGGGCTATAAGCCGGGCATGGGTTTGGGTAAAGATTTGCAGGGTATAGCGCAACCCGTTCAGGCAACTTTGCGCAAAGGTCGTGGAGCCATCGGCGCATATGGACCAGAAACTCCACAAACTATCGGCGATCCTGGACAAAGTAAGCCAATCGAAGGCAGTGATGAGCCCAGAGAATACAAAGAAAAGAACGATAAATGGAAAAGAGGCGGTGGCGAAGGCGGCAAAAAAGATTCCCGCAAGAATCGCTACCAGTACCGTAGTGTCGAGGAAGTCATTGAGAAGGGAAAGAAACAGTCCAGTGGAATCCTTCCGGACAAGTTAAGTAAAAAACTTGGCAATGTCCCTGTAATTGACATGACCGGACCAGAAAAACGTGTCCTCAGTGGCTACCATGCCCTGGGACAGACAAAGATGATCGATGAGGAGCTCTACGACCATCAACCCGCAAAGAAATCATCTGGATTCGCACTGCCGGAGTTGATGCACAATCTGAATTTGATTGTGAATCTCTGCGAACAGGACATCATTAGCCTGGACACAACTGGGCGCGAAGCCACAGACAGATATCAATCTCTCGAGCATGAGAAGAAAAATCTCGAGAAAATAGTTCGATTGGAGGAGGATCACATTGGTACTCTGGAGAGAGCCATGACTCTGGTGGAAGAACTCACCGCCGAGTCGGGAGATTTGTCTCTTGCCCGAGCAGAGAAGATCTTCATCGAACTGCAACGAGATTTCGCTGCCGAATACAAGGAATTCGCATTGGGAGATCTGGCAGCCGGCGTAATTGCACCTTTGGTCAATAATGAATTGAAAAACTGGAATCCTCTAACCGAGCCGCTTAAATTCATTGACACCATCAAGAAATGGCGAACTATTCTCGATATGCATCCATCTGGGCAGCGAAATAACGTCTTTGATCCCTACTCATCGCTGGTTTGGGCGGGGGTTATTCCCAGCTTCAGAGCATCAGTGAACCAATGGAATCCCAAGGAACACCAAAAGATGGCAGCTCTGCTCGACTCCTGGGCACCGCTCTTCCCCACTTGGGTGCTGGACAACGTTCTGGAGCAGTTGATTCTGCCGCAATTGGTTGTCGGAGTCAATGCATGGGATCCCTTGACAGATACCATTCCCATCCACAGTTGGATTCTTCCTTGGAACTCGATTTTGGGCCATAAAATGGAAGAGCATATATTCCCGACGATTCGAGAGAAGTTGGCATTTGCTTTGCAGGCATGGATTCCCCAAGATAGATCAGCTCGAGCCATGATCACTCCGTGGAAGGGTGCCTTTGACGATGGGGAAATGCAGGCGTTCTTGGTGAAGCATATTATTCCAAAGTTACAAATGTCTTTGAATGATTTGGTCATAAATCCACTTCAGCAGGATTTGGAACTTTGGAATCAAGTCTGGGAATGGAATGAACTCATACCAACTCTACTAATGGGACAAATGCTTGATAAATTCTTCTTCCCCAAATGGATGCAAGTTCTTGTACTTTGGCTAAATCAATCACCAGATTTTGATCAAATCTCTCGATGGTACACTGGATGGAAGTCTGTGCTGGGCGAGGAGTTGTTGAAGTTGCCAATGATCAAGGAACATTTGAGGCGTGCTTTGGAAATGATGCATAGAGCCAcagaaacaatgacaacaccacagcccgtgcccacaccagtagcaccaccacaagcaacagcatcgtcatcatcatcatcatcatcggcgacaacaAATTCTGCTTCGAATATCAATCCGCCGGCATTGATGGATCTTCAGATATCACCACCTGTCCAAATGGAATTCAAGGAGCTAGTCTCACAGAAATGCTCAGAACGTGGTGTGATTTTCGCACCAATGCCAGGACGTAGGGAATTTGGCAAACAGGTGTATCGTGTTGGAAAATTATTTTGCTATATCGATCGAAATGTGGTCATGTTGAGTGATGGAAGTTTAAAAAATTGGACTCCAACGTCTCTAGGGCTAACAATAGAAAGAGCTTTATCTGGATAA
- Protein Sequence
- MSGNEYEAFEITDFDLANEFNPNRPRRKLTKNQQIYGIWADSDSDADSDVEMKGRRAGKSRSSGPVNFVTGGIQQTSSFKKNELNDDDNQITDEDDEGPSNRRAVQGKEPAESGSNSSCEEETGKPTRMGFGMKSQKPSTSSKPVGAWEQHTKGIGAKLLLQMGYKPGMGLGKDLQGIAQPVQATLRKGRGAIGAYGPETPQTIGDPGQSKPIEGSDEPREYKEKNDKWKRGGGEGGKKDSRKNRYQYRSVEEVIEKGKKQSSGILPDKLSKKLGNVPVIDMTGPEKRVLSGYHALGQTKMIDEELYDHQPAKKSSGFALPELMHNLNLIVNLCEQDIISLDTTGREATDRYQSLEHEKKNLEKIVRLEEDHIGTLERAMTLVEELTAESGDLSLARAEKIFIELQRDFAAEYKEFALGDLAAGVIAPLVNNELKNWNPLTEPLKFIDTIKKWRTILDMHPSGQRNNVFDPYSSLVWAGVIPSFRASVNQWNPKEHQKMAALLDSWAPLFPTWVLDNVLEQLILPQLVVGVNAWDPLTDTIPIHSWILPWNSILGHKMEEHIFPTIREKLAFALQAWIPQDRSARAMITPWKGAFDDGEMQAFLVKHIIPKLQMSLNDLVINPLQQDLELWNQVWEWNELIPTLLMGQMLDKFFFPKWMQVLVLWLNQSPDFDQISRWYTGWKSVLGEELLKLPMIKEHLRRALEMMHRATETMTTPQPVPTPVAPPQATASSSSSSSSATTNSASNINPPALMDLQISPPVQMEFKELVSQKCSERGVIFAPMPGRREFGKQVYRVGKLFCYIDRNVVMLSDGSLKNWTPTSLGLTIERALSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01356876;
- 90% Identity
- iTF_00665631;
- 80% Identity
- -