Elun005421.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupeodes luniger
Gene Symbol
sip1
Assembly
GCA_951509635.1
Location
OX608073.1:80675883-80678640[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-91 1.9e-87 295.0 12.8 2 275 399 665 398 665 0.97
2 2 0.65 8.8e+03 -2.4 0.0 160 190 680 709 671 717 0.55

Sequence Information

Coding Sequence
ATGTCTGACAATGAATATGAAGCATTTGAAATCACTGACTATGATTTGGCAAATGAATTCAATCCCAATCGTCCACGAAGGAAGTTAACGAAGAATCAACAAATTTATGGAATATGGGCTGATAGTGATAGTGACGCTGATAGCGATGTTGAAATGTCCGGACGTCGTCGGCGTCGTGGTGCTAGTAAATCTCGTAGTTCAGGGCCGGTGAATTTTGTAACTGGCGGTATCCAACAGTCGGGTAGTTTAAAGAAAGACAAACTCAGCCAGGATGACGATAATCAAATCACTGATGAAGAAGAGGAAGATTCTTCACATCGTCGAGCAGTACAGGGCAGACAAGATGCGGCAGATAAATCTTCGAATTCCTCGTCTGAAGAGGAAGCTGGTAGTTCGACAAGAATGGGATTTGGGATGAAGCCACGTCAGCCTGCACCGAGCAGTAAGCCTGTTGGAGCGTGGGAACAACACACAAAGGGAATTGGAGCAAAATTATTGCTCCAGATGGGTTACAAGCCTGGAATGGGCTTGGGCAAAGATCTACAAGGTATAGCACAACCAGTGCAGGCAACATTACGGAAAGGACGAGGAGCGATCGGCGCTTATGGACCAGAAACCCCACAAACTATCGGGGATTCTGCTCCGAGCAAACAGATAGATAACGAAAACTCCAAAGAATACAATAAAGACAAATTGAATAAGTGGAAGAAGGGTGATAGCAAGAAAGACACacgcaaaaatcaatacaattaTCGCTCCGTCGAGGAGGTCATTGAGAAGGCCAAGAAGCATCCGTGTGGTATATTGCCGGATAAGTTAAGTAAGAAACTGGGCAATGTACCCGTGATCGATATGACTGGGCCAGAGAAACGCGTCCTGAGTGGATATCACGCCATTGGACAAACCAAGGTCGTTGATGAGGACCTCTATGACCCTCAAGGCACGAAGAAGCCAGCCGGATTCGAACTGCCCGAGTTGACGCACAACTTAAATCTGATTGTCAACCAATGCGAGCAGGAAATCATTTCGTTAGATATCGAAGGCAGAGAGGCAAGGGAAAAATACAAAGCTCTTGAGCACGAAAAGAAAAATCTCGAAAAAGTAGTTCAATTGGAGGAGGATCACATAGAGACTCTGGAGAAGGCTTTGGCTCTGGTTGAGGAGCTTAGTACCGACTCAGGTAATCTGACTTTGGCCAGAgcagaaaagatttttattgAGCTGCAACGAGATTTTCCTGCTGAGTACAAGGAATTCGCGTTGGGCGATCTTGCTGCTGGTGTGATTGCGCCTTTGGTCAATATAGAACTGAAATCCTGGAATCCTCTGGAAGACCCACTTCGATACATAGACACAATCAAGAAATGGAAAACCATTCTCGATATGCATCCATCAGGACAACGAAACAACGTCTTTGATCCGTATTCTTCGCTGGTCTGGGCTGGGGTTATTCCCAGCTTCAGAGCTTCAGTAGCCAACTGGAACCCCAAAATGCACCAGAGGATGGCAGCCCTGCTAGACTCTTGGGCTCCACTCTTTCCAACTTGGGTGCTGGACAATGTTCTCGAGCAATTAATTCTGCCACAATTAGTTGCCGGGGTCAATGAATGGGACCCATTAACAGACACCATTCCCATTCATATTTGGATTATTCCTTGGAATACGATTTTGGGGCACAAAATGGAAGAGCACATATTCCCGACTATACGAGAGAAATTAGGATTCGCTTTGCAGGCGTGGACTCCGCAAGACAGATCGGCTCGAGCAATGATCACTCCATGGAAGGGCGCATTTGACGAAGGAGAAATGCAGGCCTTCATGCTAAAGCACATCATTCCAAAGCTGCAGATGTCTTTAAATGATTTGATAATAAATCCGCTTCAGCAGGATTTGGaactcTGGAATCAAGTATGGGAATGGAAAGAACTCATTCCACCTCTCCTTATGGGTCAAATGCTCGACAAATTCTTTTTTCCCAAATGGATGCAGGTTCTGGTGCTTTGGCTTAATCAGTCGCCGGACTTTGATCAAATCTCAAGATGGTACACCGGATGGAAATCAGTTTTCGGTGAAGAGATAGTAAAATTGCCTATGATCAAGGAACACCTGCGACGTGCTCTGGAAATGATGCACAGAGCCACAGAAACAATCGCCACACCTCAACCAGTACCCACGCCAGTAGGACCACCTCATCATtcaacatcatcatcgtcaGCCTCAACAAGTGCTGCTGCTAATCTAAACCCTCCAGCACTGATGGATCTTCAAATAGCTCCTCCTGTACAGTTGGAATTCAAGGAATTAGTTTCACAGAAATGTGCAGAACGAGGTATTATTTTTGCACCAATGCCAGGTCGAAGGGAATTTGGAAAGCAGGTGTATCGAGTTGGGAAATTATTTTGCTATATTGATCGGAATGTTGTTATGTTGAGCGATGGAAGTTTGAAAAATTGGACCCCAACTTCATTGGGCCTAACCATAGAAAGAGCTGTATCGGGATGA
Protein Sequence
MSDNEYEAFEITDYDLANEFNPNRPRRKLTKNQQIYGIWADSDSDADSDVEMSGRRRRRGASKSRSSGPVNFVTGGIQQSGSLKKDKLSQDDDNQITDEEEEDSSHRRAVQGRQDAADKSSNSSSEEEAGSSTRMGFGMKPRQPAPSSKPVGAWEQHTKGIGAKLLLQMGYKPGMGLGKDLQGIAQPVQATLRKGRGAIGAYGPETPQTIGDSAPSKQIDNENSKEYNKDKLNKWKKGDSKKDTRKNQYNYRSVEEVIEKAKKHPCGILPDKLSKKLGNVPVIDMTGPEKRVLSGYHAIGQTKVVDEDLYDPQGTKKPAGFELPELTHNLNLIVNQCEQEIISLDIEGREAREKYKALEHEKKNLEKVVQLEEDHIETLEKALALVEELSTDSGNLTLARAEKIFIELQRDFPAEYKEFALGDLAAGVIAPLVNIELKSWNPLEDPLRYIDTIKKWKTILDMHPSGQRNNVFDPYSSLVWAGVIPSFRASVANWNPKMHQRMAALLDSWAPLFPTWVLDNVLEQLILPQLVAGVNEWDPLTDTIPIHIWIIPWNTILGHKMEEHIFPTIREKLGFALQAWTPQDRSARAMITPWKGAFDEGEMQAFMLKHIIPKLQMSLNDLIINPLQQDLELWNQVWEWKELIPPLLMGQMLDKFFFPKWMQVLVLWLNQSPDFDQISRWYTGWKSVFGEEIVKLPMIKEHLRRALEMMHRATETIATPQPVPTPVGPPHHSTSSSSASTSAAANLNPPALMDLQIAPPVQLEFKELVSQKCAERGIIFAPMPGRREFGKQVYRVGKLFCYIDRNVVMLSDGSLKNWTPTSLGLTIERAVSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01356876;
90% Identity
iTF_00693836;
80% Identity
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