Pros049367.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Platycheirus rosarum
Gene Symbol
sip1
Assembly
GCA_963971375.1
Location
OZ020510.1:96362833-96366227[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.5e-91 1.5e-86 292.0 16.6 2 275 396 662 395 662 0.97
2 2 0.23 6.4e+03 -2.0 0.0 158 189 675 705 667 715 0.62

Sequence Information

Coding Sequence
ATGTCGGGAGATGAGTATGAAAAATTTGAAGTCACCGACTATGACTTAGCAAATGAATTCAATCCGAATAGACCACGGCGAAAGCTAACAAAGAATCAACAAATATATGGAATATGGGCTGACAGCGATAGTGATGCCGACAGCGATGTCGAGATGACTGGTCGACGCGGTAAGGCTCGCAAGTCTGGCCCTGTGAATTTTGTTACTGGCGGCATACAACAGTCGGGCAGTTTCAAACCAGACGAGCCGAACCAAGACGATGACAACCAAATTACAGACGAAGAGGATGATGGCCCATCACATAGTCGTAAACTTCGAGGCAAAGATCCCGATGAAAGTGCTTCGAATTCGTCATCAGAAGAAGAAAACGCAGCTCAACAACCACGAATGGGACTCGGTATGAAACAACGTCAGTCTGCTGCCAGTAATAAGCCAGTAGGAGCATGGGAACAGCACACAAAGGGCATTGGAGCTAAGTTATTGCTTCAAATGGGTTATAAGCCTGGCATGGGCTTGGGCAAGGATCTTCAAGGAATCTCTCAACCAGTGCAAGCAACTCTTCGTAAGGGGCGTGGAGCAATCGGCGCTTACGGGCCAGAAACCCCTCAAACCATAGGCGATCCTGGGCAACCCAACCAAATCGCAGATGAAGAAATCCGCGATTCAAAACAGCACAAAGAGAAACTCAACCATTGGAAGAGAGGCGAAAGTAAAAAAGATTCAAAGAAAACTCGTTACTACTACCGCACAGTCGAAGAAGTCATAGAAAAGGGGAAAAAGCAATCGAGTGGAATCATGCCGAGCAAATTGAGCAAAAAGCTTGGTAATGTTCCTGTGATTGACATGACTGGTCCTGAGAAACGTGTCCTTAGCGGCTATCATGCCCTTGGACAGACAAAAGTAATTGAAGAAGAACTCTATGAAAGTCAGGCAGGCAAGAAGGCAACTGGATTTGCTCTGCCAGAGCTGATGCACAATCTAAATCTAATAGTAAATATGTGCGAGCAGGATATCATAGCTTTAGATACTGCGGAACGTGAGGCTACAGACAAATATCAAGCGCTAGATGACGAGAAGAAGAATCTTGAGAAAATAGTGCGTCTGGAAGAGGATCATATAGAAACATTGCAGAAAGCTATGTCTTTGGTGGAAGAACTCACTTCGGACCCAGAAAACTTGAGTCTTGCCAGGGCGGAGAGTATATTTATTGAGCTCCAACGTGATTTCGCCGCTGAGTACAAAGAGTTCGCGCTGGGCGATCTGGCGGCAGGAGTAATAGCCCCCCTAGTGAATATTGAACTTAGGACATGGAAACCTCTAGAGGAACCATTTAAATGTGTTGAATTAATTAAGAAATGGCGAACTATTCTCGATATGCATCCATCGGAGCAGCGAAACAATGTATTTGATCCATATTCATCGCTTGTCTGGGCTGGAGTAATTCCCAGATTTAGGGCATCAGTGAGCGAATGGAATCCTAAAACGCACCAGAAAATGGCAGCTCTGTTGGATACATGGGCACCCTTATTCCCAACTTGGGTGTTGGACAATGTGCTGGAACAATTGATTTTGCCTCGATTGGTTGCAGAAGTCAATGAATGGGATCCACTTACAGACACTATTCCCATTCATAGCTGGATTCTTCCATGGAATACGATTTTGGGGCACAAAATGGAAGAACATATTTTCCCTACAATAAGAGACAAATTGGGATTTGCTCTTCAAGCGTGGACTCCGCAGGATAGATCGGCCCGAGCAATGCTTACACCATGGAAGGGCGCATTTGATGCTGCAGAAATGCAAGTTTTCCTATTGAAGCACATTATTCCAAAACTGCAGATGTCTTTGAACGAAATGATTATAAATCCATTGCAACAGgatttagaacTCTGGAACCAGGTCTGGGAATGGAACGAACTAATACCATCACTATTAATGGCACAAATGCTCGACAAATTCTTTTTTCCCAAATGGATGCAAGTTCTTGTACTTTGGCTCAACCAATCACCCGATTTCGATCAAATTTCACGATGGTATACTGGATGGAAAACAATCCTCGGCgaagaattattaaaacaacCAATGATTAAAGAACACCTTCGACGAGCATTAGAAATAATGCAAAGAGCAACAGAAACAATGGTGGCACCACAACCTGTTCCCACACCTGTAGCACCTCCTCAAGCTGCACCAACAGGCTCTGAAGGACTAAATCCTCCGGCATTAATGGATCTTCATATATCTCCCCCCGCTCAATTAGAGTTTAAGGAACTTGTTTCGCAAAAGTGCTCAGAACGTGGTGTTATATTTGCACCAATGCCTGGGCGCAGAGAATTTGGAAAGCAGGTTTATCGAGTGGGAAAATTGTTTTGCTATATCGATCGCAATGTTGTCATGTTAAGCGATGGAAGTTTAAAAAATTGGACTCCCACTTCACTCGGACTAACCATTGAACGAGCTTTTTCTggataa
Protein Sequence
MSGDEYEKFEVTDYDLANEFNPNRPRRKLTKNQQIYGIWADSDSDADSDVEMTGRRGKARKSGPVNFVTGGIQQSGSFKPDEPNQDDDNQITDEEDDGPSHSRKLRGKDPDESASNSSSEEENAAQQPRMGLGMKQRQSAASNKPVGAWEQHTKGIGAKLLLQMGYKPGMGLGKDLQGISQPVQATLRKGRGAIGAYGPETPQTIGDPGQPNQIADEEIRDSKQHKEKLNHWKRGESKKDSKKTRYYYRTVEEVIEKGKKQSSGIMPSKLSKKLGNVPVIDMTGPEKRVLSGYHALGQTKVIEEELYESQAGKKATGFALPELMHNLNLIVNMCEQDIIALDTAEREATDKYQALDDEKKNLEKIVRLEEDHIETLQKAMSLVEELTSDPENLSLARAESIFIELQRDFAAEYKEFALGDLAAGVIAPLVNIELRTWKPLEEPFKCVELIKKWRTILDMHPSEQRNNVFDPYSSLVWAGVIPRFRASVSEWNPKTHQKMAALLDTWAPLFPTWVLDNVLEQLILPRLVAEVNEWDPLTDTIPIHSWILPWNTILGHKMEEHIFPTIRDKLGFALQAWTPQDRSARAMLTPWKGAFDAAEMQVFLLKHIIPKLQMSLNEMIINPLQQDLELWNQVWEWNELIPSLLMAQMLDKFFFPKWMQVLVLWLNQSPDFDQISRWYTGWKTILGEELLKQPMIKEHLRRALEIMQRATETMVAPQPVPTPVAPPQAAPTGSEGLNPPALMDLHISPPAQLEFKELVSQKCSERGVIFAPMPGRREFGKQVYRVGKLFCYIDRNVVMLSDGSLKNWTPTSLGLTIERAFSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01356876;
90% Identity
-
80% Identity
-