Basic Information

Insect: Solenopsis fugax
Gene Symbol: bab2
Assembly: GCA_003595255.1
Location: QKQZ01052245.1:1968-6764[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.9e-16 9.3e-13 48.5 0.0 2 42 376 417 375 430 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.9e-16	9.3e-13	48.5	0.0	2	42	376	417	375	430	0.95

Sequence Information

Coding Sequence: ATGTCTATGCAACAGTTCTGTTTGCGATGGAACAATCATCAGCCGAATTTCATCTCGGTCTTTTCCAATTTGTTGAATAATGAGACTCTGGTAGATGTCACTCTCGCTGCCGAAGGCAGGCAAATTCAGGCTCACAAAGTTGTGCTGTCAGCATGCAGCACGTACTTTCAGTCGCTGTTCACAGTGAATCCCTGTCAGCACCCTATTGTCATACTCAAGGACATCAAGTTTTCCGACCTCAAGATTATGGtagattttatgtattatggAGAAGTGAACATATCTCAAGACCAATTGCCATCTATCAtaaagACGGCAGAGAGTTTGAAGATAAAGGGACTTGCGGAAATGCATACAGCATCATTAACTAAATGGCCAAGTGGAAGCAGCGAAACGGGCGGAGGGGATCGCGGCGAATCCTGTTCACCAAGTCCATCTCCGTTGTCTCCCTCTTTTCGCAGAAAAAGATTAAGGAAGTCTTCTACTGGCTCAACGTCTGGTTCCGGTGACAAACCAGAGGAACTTAATGAAATCACACTAGTGGCTACTAACATCGTCAAACCTGAACCCCTTATTGTGTCGCAAGAAAGCGGAGAGAATTTAAGGCGACCAGTGAACACCAGCACAGAATCTCAAGGCAGTATTGATGAAGATCAGATATCAATTATGAGTAATATGGAAACTAGTTCTGCTAATACACCAGCCCAAAGTGACGGTTCTATTCAAGATGTAAGTCAACAATCGGCAGGAAATATTGGACAAAGTTCTGTTTCTTCGCAACCACCTGTTCATCAAGGATTACAATGGACTATTATGGAGCACACATATCATCCGACACGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGATCCAAGCGTCGTCGGCGTTTACGACGCCCGAAATAACAGCATCCTCGACCATCAGCGATCAGTACTCTGGTACCAGCACGACTGGTTCCAGTTGCGCCCTGACGAACTATTCGAACTCCTCCCACGGGACGTTGCAGCACGCGTCGTCGGGTGGCCCCTCGCCATCGACGCAGTGCCCCAGTAACTGCCAGAGCCCCTGCGCCAGCCCGCAGACTGCGATTAAGAGGAAGCGCTCGACTAATCCGCAGGCAGATGAGAACTTTATACGCGCGCTTGACGCCGTGCGCTACGGTGGTATAGGGTTTTGCAAAGCTGCCAGAATGTTCGGCGTGAACAACCGAACGCTCTGGCTCGAGTACAAGAAGCGCGGCTACCCGAACAATCGGCCCAGCCTCAAGTCTCGCGTTAAGCAGGAGGTCAATTCCTCGCCGCCGCCGGCACCCCCGGCGCAGCCCATGAATTCGCAGAGTCCGACGCCTATGGGCCCGCCCACAACTCCGCACAGCACACACAACACACATAGCACTCACACCATGCTGACCAGCCACAGTCCCCACACGATGCTGAGTGGTTACATTGACAGGCATACGGACTATACGCTACCGAGCTCCACAATGCCGATCAATCTGCACGGCGTTAATTACAATGCCATGTGA
Protein Sequence: MSMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRQIQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDIKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSETGGGDRGESCSPSPSPLSPSFRRKRLRKSSTGSTSGSGDKPEELNEITLVATNIVKPEPLIVSQESGENLRRPVNTSTESQGSIDEDQISIMSNMETSSANTPAQSDGSIQDVSQQSAGNIGQSSVSSQPPVHQGLQWTIMEHTYHPTRFALSSCQTNLSIQASSAFTTPEITASSTISDQYSGTSTTGSSCALTNYSNSSHGTLQHASSGGPSPSTQCPSNCQSPCASPQTAIKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEVNSSPPPAPPAQPMNSQSPTPMGPPTTPHSTHNTHSTHTMLTSHSPHTMLSGYIDRHTDYTLPSSTMPINLHGVNYNAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00729213;
90% Identity: iTF_01354706; iTF_00884993; iTF_00182696; iTF_00182548; iTF_00765460; iTF_01269891; iTF_01267467; iTF_01268939; iTF_01271115; iTF_01267660; iTF_01269709; iTF_01271318; iTF_01269149; iTF_00125828; iTF_00127363; iTF_00128104; iTF_00129098; iTF_00126828; iTF_00128333; iTF_00128883; iTF_00126619; iTF_00127582; iTF_00126080; iTF_01405608; iTF_00279883; iTF_00868205; iTF_00280048; iTF_00280660; iTF_00280539; iTF_00868031; iTF_00868685; iTF_00867539; iTF_00867312; iTF_00016113; iTF_00014645; iTF_00014813; iTF_00015965; iTF_01245138; iTF_01422835; iTF_01423015; iTF_01408084; iTF_01407158; iTF_01254711; iTF_01408986; iTF_01409299; iTF_00729213;
80% Identity: iTF_01354706;