Smay028966.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- ct
- Assembly
- GCA_034509805.1
- Location
- JASXSY010002066.1:1-17675[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4e-27 4.8e-23 82.2 0.0 3 72 324 394 322 399 0.95 2 3 4.1e-31 5.8e-27 94.7 0.1 3 77 712 787 710 789 0.96 3 3 2.7e-31 3.8e-27 95.3 0.1 3 76 959 1033 957 1036 0.96
Sequence Information
- Coding Sequence
- atttcacAATTGGTGGAGGATGTGCGCAGATTGCAATCGAGCATGGGCAAACTGCAAGAGCACACGGCCAAAGAGATCGCCAGACTCGAAGAAGAGTTACACGACAAAAGACAACACATTATGAGACTCGAAGCCAGACTGGATGCCCAAAGGGACTACGAAGAAGTTAAAAGACAGCTATGtgTACTGAAGGCCCCCGAATGCTCAGACGACCGTAATAACAAGTCGCCGAACAACGACAAATCCGAAAATACACAAAGCACTACATCACCTCTACAACAGAGGTCATCTTGCAGTCCTGTGCCCGACATTCAAAATGATTTTTCAGTTCCGGTGGCCCCACCCCCTCCCGGGCTCCAAAACGTCGAACAGTTCGGCCCGATACTCGGCGAAGAGATCGTGGCGAACTGGCGAAGATCCCTCGAACGACTTAATTCTGAACAAAAGAAAGTCTATACTTCTCCAAACCGACATGAGACTACCGGCGAAGAAAAATCTCCTGGCCTAGAATCGGTTAAAACGCCACCTCCAAGCACTTCTCCGGCACCGAATTCGCCGGCTAACATGGCTCAACCACCGCGATCCGCTAGTAGGTCCGGAACGCCATGCAAATCGCCTGCGAGCGAATCGAATAGCTCACCACGACTGAACAGCAGTTCTCcgcataacaataacaataatccgTCTCAGttgaacaacaataacaacaacaacaataatatccCGGCTGGCCTAATAAACGGTCTTTACGGCCTTAACGTTGGacttaacaataacattttaggACCGGCTGGGGCTTTGGGTTTCGACTCAATAAAGTCACCGTTCGATCACAGGTCTCCTTATCGATTTGGAGATGGTGATTGTACCATGGTTGGCCGATTCGGTGAATCACTCATACCAAAAGGCGACCCAATGGAGGCTAGACTTCAGGAAATGctaagaTATAATATGGATAAATACTCCACACAAAACTTGGATACGTTACACATAGCTCGTCGTGTGCGTGAACTGTTATCGATTCATAACGTTGGCCAGAGGTTGTTTGCCAAGTATATTCTCGGACTCTCTCAGGGGACTGTCAGTGAATTGTTGTCAAAACCGAAGCCGTGGGACAAGCTGACCGAAAAGGGACGTGATAGTTACAGGAAAATGCATGCATGGGCCTGTGACGAGAACGCGGTTATGCTCCTCAAGTCGCTGATACCGAAAAAAGGTAAAGACTCTGGCATACCGGCGGTTATGGGAAGAACTGAAAACGATGTCACCGATGAAAGGATTGTACACATATTAAACGAAGCTAGTCAAATGATGAAACCAAATCAACAAGACGACACCCAGAGCAACGATGACAGTACTTCGCCAAACCAACTAACTAGTACCTCACCGTCCAGACAAAGATCCAAAGAAGACATACCACAAGAACAAGTGGCCAGACTGTACCAAGAAGAGCTTTCAAAAATTATGGGAAAACGTTTGGAAGACTCCATGAGAAGTGGTGAACAGCCATTTGCAGGATGGCTTTTCCCGCATTTTCTTGGAAATCATACTGGCAGCCATGAAGATTACCGGACTGCATTAGATGCTTTTCACCGTGAACAATCGAAATTACAAAACTGCCCACAAAGCCAATTGTCAGGATTGTTAGCTCTTCAACAGCAAGTTGCTGTTGCGGCCATGTcgaataacaacaataataacaacaacaccATACAAGGAAACGGTATGGCTCAAGATTTATCATTACCGAAAGACAGAAAGGACATGTATTCATTTGCTGCACAACGTAAAGATTTCGGTGTTAAAGTCAATGGAACTGAAGTGTCTGACAAAGAGTCTGAAACTGTAACAGAAGCGATGAAGCAAGCCGGAAGTGCTTTTTCACTAGTTCGTCCTAAAACTGAACAAAGTGGTACATCATCTGTTGGAAGTTCAGCTAGCTCACCATTAGGTAATAACATCCTACCTCCCGAAGATTTCGGTCAATCGGCTGCCGTTAGTCCACTGCAAAGAATGGCTTCAATTACAAATGCATTGATATCTCAACCAGCAACTCCACACCATCACTCTCCTTCACAGAGGCCTTTGAAAGCTGTATTGCCACCAATCACACAACAACAATTCGACCAgttcaataatttgaataccGAAGAAATTGTGAGGAAAGTCAAAGAGCAACTAAGTCAATTCTCAATCAGTCAGAGATTGTTTGGCGAATCCGTGTTAGGTCTTTCTCAAGGAAGTGTGTCTGATCTCTTAGCTAGACCAAAACCATGGCACATGTTGACACAGAAAGGAAGAGAACCATTTATAagaatgaaaatgtttttggaAGACGACAAAGCTGTGCACAAATTAGTGGCCTCCCAATACAAGATAGCTCCAGAAAAATTAATGAGAACTGGAGGATACGGTGGAGCAAGTCCTATGAACCAGAATTTAGTAAAATCAACACATACTTTCGGTGGTAAAATGACACCTTCACCGCTCGATCTCTTAAAAGTTAGTGCTGACGTGGATCGTCAAACACCGCATCATCATATACTTACCTCAATGTGCAACACTTCCACGACAATGTCGGAAGACTCTGATATGGCGTCTTCATTACAATCACCAAGCAACCATCATATCCAACTCCAATCTCCAGGTGGTCATCATCACGCAAGTTCGTCTACTGCTTCTTCATTGATGTCATCAGGAAGTCAACTGGCATCTATAATGGCCAacgaaaataaacttaaagCAAGCCCGATCCCAAGCAATGGAATTCCACAAAACTTGATGTTACAACACGTAGCAGCAGCTTTCCAAAACTCCGGAACACGTCACCCACCTCCTGTCGTACCTTCAGTTTATGAAATGGCTGCTCTGACACAGGATCTTGACACACAAACGATCACTACGAAAATCAAGGAGGCTCTACTTGCAAATAATATTGgacaaaaaattttcggTGAAGCCGTTTTGGGGCTCTCTCAAGGATCAGTTAGCGAGTTATTGTCAAAACCAAAACCTTGGCATATGTTGAGTATCAAGGGCCGTGAACCATTCATTCGAATGCAACTTTGGCTTTCCGATCAACACAACGTGGAAAGATTACAAGCGATCAAAAGTGAACGTAGAGAAATGAATAAAAGAAGAAGAGGATCTGGTCAACAAGATAATGGAAGTGATACATCCTCAAATGATACTTCTGACTTCTATCATAGTGGTACAAGCAGTCCTCCTTCTGCTGCAAAAAAACAACGAgtTCTGTTTTCCGATGAACAAAAAGAAGCATTGAAACTAGCGTTTGCACTAGATCAATACCCGAGTGTCGGTACTATCGAGTTCCTTGCATCCGAGTTGAACTTGGCAACTAGGACAATAACTAACTGGTTTCATAATCACAGAATGAGAATTAAGCAACAATCACCTCATTCTGATTCTCAACAACAACCACAAAACGGCCCGGGATTCGATCCAATTCAGTTTAGAATCCTTTTGAGTCATCGACTCGGTTTTGGCGGCCTGCCGATTCCGTTCAACGCAGGTAACCCTTACTTACAACACGGCGCTGATCTCTCTTCCTTCATACCAATGTTGACATCGTCGTCTTCGGCAACCGTGGATGAACAAATGTCCGGATTGGATTTGAGCGTGAAACACGAAGTGGATACTGACTTTGACGACGAAGACAGTCGGTCGGAAGAGTCTGAGCCACGTGAAGAAATCCCGGCTGTACCCGTAGTTGGGAGCTCTCGCCGAAAACCAGCTGCTCCGCAATGGGTTAATCCCGATTGGCTGCAGTCCGAGCAGAAGCAACAGCAGCAATCCGAAGTTATTATAAATGGTGTTTGCGTGATGCAAGCAACCGACGGCTGTAACGAAAGAAGGAGATCGGAAACCGTTCGGGTGGAACCGTCAGATGTTAACGATGAAGACAAATCTGGCAGGTCTACGCCCTCTGAAGCCAGTTCTTTAAAACAAGAATCAGATGGTGAACACGAACAAGAAGCAATCAGTGTTAAGGAAGAGAAATCGTGGAACAACGAATTTTAG
- Protein Sequence
- ISQLVEDVRRLQSSMGKLQEHTAKEIARLEEELHDKRQHIMRLEARLDAQRDYEEVKRQLCVLKAPECSDDRNNKSPNNDKSENTQSTTSPLQQRSSCSPVPDIQNDFSVPVAPPPPGLQNVEQFGPILGEEIVANWRRSLERLNSEQKKVYTSPNRHETTGEEKSPGLESVKTPPPSTSPAPNSPANMAQPPRSASRSGTPCKSPASESNSSPRLNSSSPHNNNNNPSQLNNNNNNNNNIPAGLINGLYGLNVGLNNNILGPAGALGFDSIKSPFDHRSPYRFGDGDCTMVGRFGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARRVRELLSIHNVGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVMLLKSLIPKKGKDSGIPAVMGRTENDVTDERIVHILNEASQMMKPNQQDDTQSNDDSTSPNQLTSTSPSRQRSKEDIPQEQVARLYQEELSKIMGKRLEDSMRSGEQPFAGWLFPHFLGNHTGSHEDYRTALDAFHREQSKLQNCPQSQLSGLLALQQQVAVAAMSNNNNNNNNTIQGNGMAQDLSLPKDRKDMYSFAAQRKDFGVKVNGTEVSDKESETVTEAMKQAGSAFSLVRPKTEQSGTSSVGSSASSPLGNNILPPEDFGQSAAVSPLQRMASITNALISQPATPHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDKAVHKLVASQYKIAPEKLMRTGGYGGASPMNQNLVKSTHTFGGKMTPSPLDLLKVSADVDRQTPHHHILTSMCNTSTTMSEDSDMASSLQSPSNHHIQLQSPGGHHHASSSTASSLMSSGSQLASIMANENKLKASPIPSNGIPQNLMLQHVAAAFQNSGTRHPPPVVPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDQHNVERLQAIKSERREMNKRRRGSGQQDNGSDTSSNDTSDFYHSGTSSPPSAAKKQRVLFSDEQKEALKLAFALDQYPSVGTIEFLASELNLATRTITNWFHNHRMRIKQQSPHSDSQQQPQNGPGFDPIQFRILLSHRLGFGGLPIPFNAGNPYLQHGADLSSFIPMLTSSSSATVDEQMSGLDLSVKHEVDTDFDDEDSRSEESEPREEIPAVPVVGSSRRKPAAPQWVNPDWLQSEQKQQQQSEVIINGVCVMQATDGCNERRRSETVRVEPSDVNDEDKSGRSTPSEASSLKQESDGEHEQEAISVKEEKSWNNEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01346964; iTF_00135208; iTF_00135104; iTF_01303973; iTF_01304646; iTF_01304748; iTF_01304079; iTF_00972840; iTF_00972941; iTF_00418184; iTF_00418072; iTF_00670120; iTF_00670031; iTF_00308625; iTF_00308727; iTF_01330361; iTF_01330445; iTF_00135945; iTF_00136028; iTF_01432907; iTF_01432823; iTF_00811756; iTF_00811843; iTF_00340463; iTF_00340368; iTF_00940260; iTF_00940163; iTF_00463241; iTF_00463145; iTF_00184398; iTF_00184475; iTF_01328401; iTF_01328496; iTF_01346258; iTF_01346358; iTF_01499539; iTF_01499440; iTF_00018804; iTF_00018907; iTF_00468757; iTF_00468835; iTF_01350197; iTF_01350178; iTF_01305334; iTF_01305439; iTF_01032670; iTF_01032773; iTF_01031744; iTF_01031836; iTF_01167392; iTF_01167491; iTF_00134128; iTF_00134031; iTF_01169744; iTF_01169646; iTF_01037535; iTF_01037618;
- 90% Identity
- iTF_01346358;
- 80% Identity
- iTF_01346964;