Basic Information

Gene Symbol
ct
Assembly
GCA_008528875.1
Location
PVMI01060067.1:2866-11976[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.3e-27 4.2e-23 82.1 0.0 3 72 327 397 325 402 0.95
2 3 2.7e-31 5e-27 94.7 0.1 3 77 716 791 714 793 0.96
3 3 1.8e-31 3.3e-27 95.3 0.1 3 76 963 1037 961 1040 0.96

Sequence Information

Coding Sequence
ATGGAAAATAACGACGACatttcacAATTGGTGGAGGATGTACGCAGACTACAATCGAGTATCGGTAAACTACAAGATCACACAGCAAAAGAGATTGCCAGACTCGAGGAAGAGTTACATGACAAAAGACAACACATTATGAGACTAGAAGCCAGATTGGAAGCTCAGAGAGACTACGAAGAAGTTAAGCGACAGCTATGtgtacTGAAGGCCGTCGAATGTTCAGACGACCGTAATAACAAGTCGCCGAACAACAACAAATCTGAAAATACACAAAGCACATCACCTCAACAACAGAGGTCGTCTTGCAGTCCTGTGCCTGAAATTCAAAATGATTTTTCAGTTCCGGTGGCCCCACCCCCTCCCGGGCTACAAAACGTCGAACAGTTTGGCCCGATACTCGGCGAAGAGATCGTGGCCAACTGGCGAAGATCCCTCGAATGcaataaatatgaacaaaagAAAGTCTATACTTCTCCAAACCGACATGAAACTACCGataaggAAAAGTCACCAGGTCTAGAATCTATCAAAACACCACCTCCAAGCACGTCTCCAGCACCAACTTCGCCGTCTGTCATGGTTCAACCAGCGCGATCTGCTAGTAGGTCCGGAACACCATGCAAATCGCCCACAAGTGAATCAAACAGTTCACCACGACTGAACAATAGTTCTCcacataacaataacaataacccATCTCAGttgaacaacaacaacaacaacaatatccCCGCAGGCCTCATAAATGGTCTCTGTGGTCTTAATGTTGGTctcaacaataacattttaggaCCTGCTAGTGCTTTAGGGTTTGACTTGATAAAGTCGCCTTTTGATCACAGGTCTCCTTATCGATTTGGAGATGGTGATTGTACCATGGTTGGGCGATTCGGTGAATCACTTATACCGAAAGGTGATCCCATGGAAGCTAGACTTCAAGAAATGCttagatataatatggacAAATATTCTACTCAAAACTTGGATACATTGCATATAGCTCGTCGTGTACGCGAACTACTGTCCATTCATAACGTGGGCCAAAGGTTGTTTGCCAAGTATATTCTCGGACTTTCCCAGGGGACCGTCAGTGAATTGTTGTCAAAACCTAAGCCGTGGGACAAGCTGACCGAAAAGGGACGCGATAGCTATAGGAAAATGCATGCATGGGCATGTGACGAGAACGCGGTTATGCTACTCAAGTCGTTGATACCGAAAAAAGGTAAAGATTCTGGCATACCTACGGTAATGGGAAGATCTGAAAACGACGTCACCGATGAAAGGATTGTACACATATTGAATGAAGCGAGTCAAATGATGAAACCAAATGCACAACAAGACGACACTCAAAGCAATGACGAAAGCACTTCACCAAatcaattaattaGTACTTCCCCGTCCAGACAAAGACCTAAAGAAGATATACCACAAGAACAAGTTGCCCGATTATATCAAGAAGAGCTATCAAAAATTATGGGCAAGCGTTTGGAAGACTCTATGAGAAGTGGCGAACAGCCGTTTGCAGGttgGCTCTTCCCTCATTTCTTCGGAAATCATACCGGCAACCACGATGATATTCGAACTGCATTGGATGCTTACCACcgagaattatcaaaattacaaaactgcCCACAGAGCCAATTGTCAGGATTGTTAGCTCTTCAACAACAAGCTGCCGTTGCAGCGATGtcaaacaacaacaataataacaataacaataccaTCCAAGGAACCGGTATTGCTCAAGACTTGTCTTTACCAAAAGACAGAAAAGATATTTATCCGTTTGTACAGAGAAAAGATTTTGCTGTTAAAGTAAATGGGACCGAGGTTTCAGACAAAGAATCTGAAACTGTAGCAGAAGCAATGAAACAGGCTGGAAGTGCTTTTTCGCTTGTACGACCTAAAACTGAACAAAgtggTACATCATCTGTAGGAAGCTCGGCTAGCTCACCGTTAGGTAATACTATTTTACCTCCCGAAGACTTCGGTCAATCGGCTGCAGTCAGTCCACTTCAAAGAATGGCTTCAATTACAAATGCTTTAATTTCTCAACCCGCTACTCCACATCATCATTCTCCTTCGCAGAGACCTCTGAAAGCTGTATTGCCACCAATCACTCAACAACAGTTcgatcaatttaataatttgaatactgAAGAAATTGTGAGGAAAGTCAAAGAGCAACTTAGTCAATTTTCAATCAGTCAGAGACTATTTGGAGAATCTGTATTGGGTCTTTCTCAGGGAAGTGTGTCCGATCTCTTGGCTAGACCAAAACCATGGCATATGTTGACTCAAAAAGGAAGAGAACCCTTCATaagaatgaaaatgtttttggaGGATGATAAAGCTGTGCATAAACTAGTTGCTTctcaatataaaatagcaCCAGAAAAGCTTATGCGAACTGGAGGATATGGCGGATCAAGTcctatGAACCAGAATTTGGTAAAATCAACTCACACTTTTGGTGGTAAAATGACCCCATCACCTCTCGATCTCTTAAAAGTTAGTGCAGATGTGGATCGCCAAACACCACATCATCATATACTTACCTCAATGTGTAACACATCTACAACAATGTCAGAGGACTCTGATATGGCGTCTTCACTACAGTCGCCCAGCAACCATCATATTCAACTTCAGTCTCCAGGTGGACATCACCACGCAACTTCGTCTACTGCTTCATCATTAATGTCCACAGGAAGTCAACTGGCGTCGATGATGGTCActgaaaataaacttaaagcAAGCCCAATACCAAACAATGGAATTCCGCAAAACCTGATGTTACAACATGTGGCTGCAGCTTTCCAAAATTCTGGAACACGTCATCCACCAGCTGTTGTACCTTCAGTTTACGAAATGGCTGCTCTAACGCAAGATCTTGACACACAGACTATAACTACTAAAATCAAAGAAGCACTCCTTGCTAATAATATTGgacaaaaaattttcgGTGAAGCTGTACTGGGACTCTCTCAAGGATCAGTCAGTGAATTGCTATCAAAACCTAAGCCATGGCATATGCTGAGCATTAAGGGACGTGAACCATTCATTCGGATGCAACTTTGGCTATCCGATCAACACAATGTGGAAAGATTGCAAGCGATTAAAAGTGAACGTAGAGAGATGAACAAAAGAAGACGAGGATCTGGCCAACAAGATAATGGAAGTGACACATCCTCAAACGACACTTCAGATTTTTATCACAGTGGCACTAGTAGTCCTCCATCTGCCGCAAAAAAACAACGAGTTCTGTTCTCCGATGAACAAAAAGAAGCATTGAAATTAGCATTTGCCCTGGATCAATACCCGAGTGTTGGTACCATAGAGTTTCTTGCATCGGAGTTAAATTTAGCTACTAGGACAATAACGAACTGGTTCCACAACCATAGAATGAGGATCAAGCAACAATCGCCTCATTCTGATTCGCAGCAACAACAATCACAAACTGGTCCTGGATTTGACCCAATTCAGTTCAGGATTCTCTTGAGCCATCGACTTGGTTTCGGTGGCCTACCAATTCCGTTTAACGCAGGAAACCCTTATTTACAACACGGCGCCGATCTGTCTTCCTTCATACCAATGTTGACGTCATCCTCTTCGGCCACAGTGGACGAACAAATGTCCGGATTGGACTTGAGTGTAAAACACGAAGTAGACACTGACTTTGACGACGAAGACAGCCGGTCGGAAGAGTCGGAGCCTCGAGAAGAAATCCCGGCCGTACCCGTAGTCGGAAGTTCTCGCCGAAAACCAGCTGCTCCACAGTGGGTTAATCCAGATTGGTTACAATCAGAACAGAAGCAACAACAGCAGCAATccgaagtaataataaatggcgTTTGCGTAATGCAAGCTGCCGATGGCTGCACCGAAAGAAGAAGGTCGGAGACCATTCGAGTAGAACCGTCGGATGTCCACGACGAAGACAAGTCTGGTAGATCCACACCATCGGAAGCCAGTTCCTTAAAACAAGAATCCGATGGCGAACACGAACAGGAAGCTATCAGTGTTAAGGAAGAGAAATCGTGGAACAACGAATTTTAG
Protein Sequence
MENNDDISQLVEDVRRLQSSIGKLQDHTAKEIARLEEELHDKRQHIMRLEARLEAQRDYEEVKRQLCVLKAVECSDDRNNKSPNNNKSENTQSTSPQQQRSSCSPVPEIQNDFSVPVAPPPPGLQNVEQFGPILGEEIVANWRRSLECNKYEQKKVYTSPNRHETTDKEKSPGLESIKTPPPSTSPAPTSPSVMVQPARSASRSGTPCKSPTSESNSSPRLNNSSPHNNNNNPSQLNNNNNNNIPAGLINGLCGLNVGLNNNILGPASALGFDLIKSPFDHRSPYRFGDGDCTMVGRFGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARRVRELLSIHNVGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVMLLKSLIPKKGKDSGIPTVMGRSENDVTDERIVHILNEASQMMKPNAQQDDTQSNDESTSPNQLISTSPSRQRPKEDIPQEQVARLYQEELSKIMGKRLEDSMRSGEQPFAGWLFPHFFGNHTGNHDDIRTALDAYHRELSKLQNCPQSQLSGLLALQQQAAVAAMSNNNNNNNNNTIQGTGIAQDLSLPKDRKDIYPFVQRKDFAVKVNGTEVSDKESETVAEAMKQAGSAFSLVRPKTEQSGTSSVGSSASSPLGNTILPPEDFGQSAAVSPLQRMASITNALISQPATPHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDKAVHKLVASQYKIAPEKLMRTGGYGGSSPMNQNLVKSTHTFGGKMTPSPLDLLKVSADVDRQTPHHHILTSMCNTSTTMSEDSDMASSLQSPSNHHIQLQSPGGHHHATSSTASSLMSTGSQLASMMVTENKLKASPIPNNGIPQNLMLQHVAAAFQNSGTRHPPAVVPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDQHNVERLQAIKSERREMNKRRRGSGQQDNGSDTSSNDTSDFYHSGTSSPPSAAKKQRVLFSDEQKEALKLAFALDQYPSVGTIEFLASELNLATRTITNWFHNHRMRIKQQSPHSDSQQQQSQTGPGFDPIQFRILLSHRLGFGGLPIPFNAGNPYLQHGADLSSFIPMLTSSSSATVDEQMSGLDLSVKHEVDTDFDDEDSRSEESEPREEIPAVPVVGSSRRKPAAPQWVNPDWLQSEQKQQQQQSEVIINGVCVMQAADGCTERRRSETIRVEPSDVHDEDKSGRSTPSEASSLKQESDGEHEQEAISVKEEKSWNNEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01346874;
90% Identity
iTF_01346358;
80% Identity
iTF_00184475;