Basic Information

Gene Symbol
ct
Assembly
None
Location
scaffold133:441829-469375[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.5e-27 3.1e-23 82.0 0.0 3 72 404 474 402 479 0.95
2 3 2.9e-31 3.7e-27 94.6 0.1 3 77 787 862 785 864 0.96
3 3 1.9e-31 2.4e-27 95.2 0.1 3 76 1032 1106 1030 1109 0.96

Sequence Information

Coding Sequence
ATGGACGTCCAGGCTATGCAGTCTATGGATTGGCTCTTCAAAAAAGAACGCATCTACTTATTGGCTCAGTTTTGGCAACAGAGAGCTACTTTGGCGGAAAAAGAAGTGACTGCCTTGAAGGAAAAGTTGACCAACAACAAAGCACAAGACACAAACGACATGACCATGGCCACGCCTTTGAGCAATCATGTCGAGTCCACCGAGGATCAGAATAAAACGCCCGTCGAACTTGAACTTTCTGCCAAAGAGAAAGAAATTTCACAATTAGTCGAAGACGTGCGTAAACTTCAGTCGAGCATCGGGAAACTGCAAGAAAACACTGCCAAAGAAATTGCCAGGTTGGAAGAAGAGTTACACGACAAAAGGCAGCACATTTTGAGACTGGAAGCACGGTTAGACGCACAAAGAGATTACGAAGAAGTCAAACGACAGTTATGTGTGCTGAAGGCCGTCGAATGTTCAGATGACCCTAACGACAAGTCACCGAACAACGATAAATCTGAGACGACCATGCGAGGTTCATCGCCTCAGCCTCAGCGGTTATCTTGCAGTCCTACACTCGACATGCACAATGATTTTTCAGTTCCGGTGATCCCACCCCCTCTCGGGCTCCAAAACGTTGAACAGTTTGGCCCGATACTCGGCCAAGAGATCGTGGCTAACTGGCGAAGAGCTCTCGAACGCAATCATTCTGAAAACAAGAAAGTCTATACTTCTCCGAGCCGACAAGAAAACTGCTCCGTGAAAGAAAAATCACCTTGTTTGGATTCTGCTAAATCACCAGCACCCAGTACTTCTCCATCGCCAATTTCACCATCCAGTAACGCTCATCAAGCGAGATCAACTAGTAGATCATCATGCAAATCTCCAACAAGTGAATCAAACAGTTCACCGAGACTTAATAGTAGCTCACCACACAACAATAATAATAACCCTTCGCAAATGAACAACAATAATAACATACCAGCGGGTCTTATAAATGGACTTTGCGGCCTCAACGTAGGGCTCAACAACAACATTCTAGGACCAGCTGGGGCATTAGGATTTGATTTGATTAAGTCTCCATTTGATCATAGATCTCCGTATCGTTTTTCTGATAATGATTGTACTATGGTCGGAAGATTTGGTGAGTCACTTATACCTAAAGGAGATCCTATGGAAGCTAGACTTCAAGAAATGCTCAGATATAATATGGACAAATACTCCACACAAAATTTAGACACATTGCATATAGCTCGTCGTGTGCGAGAACTACTGTCAATTCACAATGTTGGACAGAGACTGTTTGCCAAGTATATACTTGGACTGTCACAAGGGACCGTAAGTGAGCTATTGTCTAAACCAAAGCCATGGGACAAATTAACCGAAAAAGGACGCGATAGCTACAGGAAAATGCATGCATGGGCTTGCGATGAGAACGCGGTTATGCTGCTCAAGTCTTTAATACCGAAAAAAGGTAAAGACTCTGGCATACCGACAGTTATGTGTAAATCAGACAATGATGTAACTGATGAACGTATTGTACACATACTGAACGAGGCTAGTCAAATGATGAAGCCCAGTCAACAACAAGATGATACCCAGAGCAATGATAGTACATCACCTAATCAATTAAATAATACCTCACCATCTAGATCAAAATTCAAGGAAGATTTGCCTCAAGAACAAGTTGCTAGACTTTACCAAGAAGAACTTTCAAAACTCATGGGTAAACGATTGGAAGAATCCATGAGAAGTGGAGAACAACCATTTGCCGGTTGGCTATTTCCACAATTTTTCGGAAATCATACTGGTAATCACGAAGATATCAGAACAGCATTGGATGCCTACCATCGCGAATTGTCAAAATTACAAAATTGCCCACAAAGTCAACTATCCGGATTATTAGCCCTCCAGCAACAAGCAGCTGTAGCGGCAATGGCTAACAATAACAATACTATTCAAGGGAATGGTATGGCTCAAGATTTGTCTATACCTAAAGATAGGAAAGACATGTTTGCGTTTGTACAACGAAAAGATTTTGGTATGAAAGTTAATGGAACTGATATTTCAGACAAAGAAGCAGAGAGTGTGGCTGAAGCAATGAAACACGCTGGTAGTGCTTTTTCTCTCGTTAAACCAAAAACTGAGCCAAGTGGAACATCTTCTGTTGGTAGCTCAGCCAGTTCACCTTTGGGTAACTCGATTTTACCACCTGAAGATTTTAATCAATCTGCTGCAGTTAGTCCGCTGCAACGAATGGCTTCAATAACTAACGCTTTAATTTCTCAACCCTCTACACCACATCATCATTCACCCTCACAACGGCCTTTAAAGGCAGTGTTACCACCTATTACTCAACAACAATTTGATCAATTTAATAATTTAAATACTGAAGAAATCGTACGAAAAGTCAAAGAACAATTAAGTCAATTTTCCATTAGTCAGCGATTATTTGGCGAATCTGTGTTGGGTCTTTCTCAAGGAAGTGTGTCCGATCTCTTAGCTAGACCAAAACCTTGGCACATGTTGACTCAAAAGGGACGTGAACCTTTTATACGAATGAAAATGTTCTTGGAAGATGACAAAGCCGTGCATAAACTAGTTGCTTCTCAGTATAAAATTGCCCCAGAAAAATTAATGAGAACTGGTGGTTATGGTGGTGCAAGTCCTATGAATCAGTCCTTAGCAAAATCGTCCCATCCATTTGGTGGCAAAATGACTCCTTCACCTTTAGATCTCTTAAAAGTCAATGCCGAAAATGACCGACAAACCCCTCATCACCAAATGCTTAATTCTATTTGTAATACATCTACAGTATCGGAAGACTCAGATGTAGCATCGTCATTACAATCACCTAACAATCACCATTTGCAGCTTCAGTCTCCTGGAGGTCATTCTCATGTATCGGCTTCTACTGCCTCATCGTTGATCACTTCTGGAAGTCAATTAGCAACAATAATGGCTGGTGAAAACAAACTAAAATCTTCGATTTCAAATAATGGTTTCCCTCAAAACATTATGTTACAACACGTAGCAGCAGCGTTTCAAAACCCAGGATCACGCCATCCACCTCCTGTTGTACCTTCCGTTTATGAAATGGCAGCCTTAACCCAAGATCTCGATACCCAAACTATCACTACAAAAATCAAAGAAGCCTTATTAGCCAACAATATTGGACAAAAAATATTCGGAGAAGCCGTATTAGGACTATCTCAAGGATCAGTCAGTGAATTATTATCCAAGCCAAAACCATGGCATATGTTAAGTATTAAAGGCCGTGAACCATTCATTCGAATGCAACTTTGGCTTTCAGATCAACATAATGTTGAAAGATTACAGGCTATAAAAAGTGAAAGAAGAGAAATGAATAAAAGGCGAAGAGGTTCTGGTCAGCAAGACAATGGAAGTGATACGTCATCCAATGACAATTCTGATTTCTATCACAGTGGTACCAGTAGTCCTCCATCTGCTGCTAAAAAACAGAGAGTGTTATTTTCGGATGAACAAAAAGAAGCTCTTAAGCTGGCATTTGCTTTAGATCAATATCCTAGTGTGGGTACTATTGAGTTCCTAGCTTCCGAATTGAATTTGGCTACTAGGACTATTACCAATTGGTTCCATAATCATAGAATGAGAATCAAGCAACAATCACCTCACTCTGACTCTCAGCAACAGCAATCGCAAAATGGACCTGGTTTCGATCCTATTCAATTTAGAATATTATTGAGCCACCGACTTGGATTTGGAGGTTTACCCTTACCATTTAATGCCGGAAATCCATACTTGCAACATGCCGCCGTTGCTGCTGCAGCTGCTGGTGGTGACCTCTCATCCTTTATGCCTATGTTAACAACTTCATCATCCTCAGCAGCCACAGTTGATGAACAAATGTCTGGCTTGGATCTTAGTGTTAAACACGAAATGGACACAGACTTCTATGATGATGACGACGAAAGCCGATCCGATGAGTCTGAAGTTCGAGAAGAAGCACCTGCAGTTCCAGTGGTGGGCAGTTCACGGCGAAAGCCAGCCGCACCACAGTGGGTCAACCCAGACTGGTTGCATAGCGAACAAAAGCAACAACAACAGCAATCACAATCTGAGGTGATTATAAATGGAGTTTGTGTTATGCAAGCGGCTGATGGTTGCAACGAGAGAAGAAGGTCGGAAACCGTTCGAGTGGAACCTACAGACATCAATGATGGAACTAAATCTGGTCGGTCCACCCCTTCAGAGACAAGCTCAGTTAAGCATGGATCAGACGGCGAACGTGATCAGGAACCAATCAGTGTAAAGGAGGAGAAAACGTGGAACAACGAATTTTAA
Protein Sequence
MDVQAMQSMDWLFKKERIYLLAQFWQQRATLAEKEVTALKEKLTNNKAQDTNDMTMATPLSNHVESTEDQNKTPVELELSAKEKEISQLVEDVRKLQSSIGKLQENTAKEIARLEEELHDKRQHILRLEARLDAQRDYEEVKRQLCVLKAVECSDDPNDKSPNNDKSETTMRGSSPQPQRLSCSPTLDMHNDFSVPVIPPPLGLQNVEQFGPILGQEIVANWRRALERNHSENKKVYTSPSRQENCSVKEKSPCLDSAKSPAPSTSPSPISPSSNAHQARSTSRSSCKSPTSESNSSPRLNSSSPHNNNNNPSQMNNNNNIPAGLINGLCGLNVGLNNNILGPAGALGFDLIKSPFDHRSPYRFSDNDCTMVGRFGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARRVRELLSIHNVGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVMLLKSLIPKKGKDSGIPTVMCKSDNDVTDERIVHILNEASQMMKPSQQQDDTQSNDSTSPNQLNNTSPSRSKFKEDLPQEQVARLYQEELSKLMGKRLEESMRSGEQPFAGWLFPQFFGNHTGNHEDIRTALDAYHRELSKLQNCPQSQLSGLLALQQQAAVAAMANNNNTIQGNGMAQDLSIPKDRKDMFAFVQRKDFGMKVNGTDISDKEAESVAEAMKHAGSAFSLVKPKTEPSGTSSVGSSASSPLGNSILPPEDFNQSAAVSPLQRMASITNALISQPSTPHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDKAVHKLVASQYKIAPEKLMRTGGYGGASPMNQSLAKSSHPFGGKMTPSPLDLLKVNAENDRQTPHHQMLNSICNTSTVSEDSDVASSLQSPNNHHLQLQSPGGHSHVSASTASSLITSGSQLATIMAGENKLKSSISNNGFPQNIMLQHVAAAFQNPGSRHPPPVVPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDQHNVERLQAIKSERREMNKRRRGSGQQDNGSDTSSNDNSDFYHSGTSSPPSAAKKQRVLFSDEQKEALKLAFALDQYPSVGTIEFLASELNLATRTITNWFHNHRMRIKQQSPHSDSQQQQSQNGPGFDPIQFRILLSHRLGFGGLPLPFNAGNPYLQHAAVAAAAAGGDLSSFMPMLTTSSSSAATVDEQMSGLDLSVKHEMDTDFYDDDDESRSDESEVREEAPAVPVVGSSRRKPAAPQWVNPDWLHSEQKQQQQQSQSEVIINGVCVMQAADGCNERRRSETVRVEPTDINDGTKSGRSTPSETSSVKHGSDGERDQEPISVKEEKTWNNEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01346874;
90% Identity
iTF_00418184;
80% Identity
iTF_00418184;