Basic Information

Gene Symbol
ct
Assembly
GCA_013282895.1
Location
scaffold:40546165-40565791[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.4e-27 3.4e-23 82.1 0.0 3 72 385 455 383 460 0.95
2 3 2.9e-31 4e-27 94.6 0.1 3 77 775 850 773 852 0.96
3 3 1.6e-31 2.2e-27 95.5 0.1 3 76 1023 1097 1021 1100 0.96

Sequence Information

Coding Sequence
ATGTTTTTCTTTTCGCAGAGAGCTACTTTGGCGGAGAAAGAAGTTACTACCTTGAAGGAACAATTGACCAACAACAAAGACAAAGCACAAGATTCAAACGTCATGACCATGGCCACGCCTCTGGGTAATCACGTCGAGTCCACTGAGGATCAAAACAAAACTTCGACTGAACTTGAACTATCAACTAAGGAAAAAGAAATTTCACAATTGGTGGATGATGTACGCAAACTACAATCTAGTATTGGGAAACTACAAGAGAACACAGCAAAGGAGATCGCTAGACTGGAAGAAGAGTTACACGACAAAAGACAACACATAATGAGACTCGAAGCCAGATTGGACGCTCAGAGAGACTACGATGAAGTTAAACGACAGTTATGTTGTATGAAGACCGTAGAATGCTCTCTCGACTTTAATAACAAATCACCGAACAATTATAAATCTGAAACCACACAAAGTACTTCACCTCAACAACACAGGTCATCTTGTAGTCCTGTACCTGATGTCCAAAATGATTTTTCAGTTCCGGTGGCCCCACCCCCTCCCGGGCTCCAAAACGTTGAACAGTTCGGCCCGATACTCGGCGAAGAGATCGTGGCCAACTGGCGAAGATCTCTCGAACGAAATAATTCTGAACAAAAGAAAGTCTATACTTCTCCAAACCGTCAAGAAACTACCGGAAATGAAAATTCTCCTGACCTAGATTCTATGAAAACACCACCTTTAAGTACTTCTCCGGCACCGGCTTCTCCTGCTAATACAGTTCAACCAGCACGGCCAGCTAGTAGGTCTGGTACACCATGTAAATCGCCCACAAGCGAATCGAACAGTTCACCTCGACTTAATAGCAGTTCTCCTCATAACAATAACAATAATCCATCTCAATTGAACAACAACAATAATATTCCTGCGGGACTTATAAATGGTCTTTGTGGACTTAATGTTGGACTGAACAATAACATTTTAGGGCCCGCTGGTGCTTTAGGATTCGACTTGATAAAGTCACCATTTGACCATAGATCATCTTATCGATTTGGAGATGGTGATTGTACTATGGTTGGACGATTCGGTGAATCACTAATACCAAAAGGCGATCCCATGGAAGCTAGACTTCAGGAAATGCTTAGATATAATATGGACAAATATTCTACCCAAAACTTGGACACATTGCACATAGCTCGTCGTGTGCGTGAACTATTATCCATTCATAATGTCGGCCAAAGGTTGTTTGCCAAGTATATTCTCGGACTCTCTCAGGGGACTGTCAGTGAGTTGTTGTCAAAACCGAAACCCTGGGACAAGCTAACCGAAAAGGGACGCGATAGCTATAGGAAAATGCACGCATGGGCTTGTGACGAGAACGCGGTTATGCTACTCAAGTCGTTGATACCGAAAAAAGGTAAAGACTCTGGCATACCGGCGGTAATGGGAAGAACAGAAAACGACGTCGCTGACGAAAGAATTGTACATATATTAAATGAAGCGAGTCAAATGATGAAACCAAATCAACAACAAGACGATACTCAAAGCAATGATGATAGCACGTCACCAAACCAATTAAATAGTACTTCACCGTCCAGACAAAGATCCAAAGAAGATATACCACAAGAACAAGTGGCCAGACTATATCAAGAAGAGTTTACAAAAATAATGGGAAAACGTTTAGAAGACTCCATGAGAAGTGGTGAACAACCATTTGCAGGATGGCTCTTCCCTCATTTCTTTGGAAATCATACCGGTAACCATGAAGATATTAGGACTGCATTAGATGCTTATCATCGTGAGTTATCAAAATTACAAAACTGCCCTCAAAGTCAATTATCAGGGTTATTAGCTCTTCAACAACAAGCTGCTGTTGCAGCTATGTCTAACAATAACAATAACAACAATAACAATAATACCATACAAGGTAACGGTATGGCTCAAGATTTATCTTTACCAAAAGATAGAAAAGATATGTATTCATTCGCACAACGAAAAGATTTTGGTGTTAAAATAAATGGAACTGAAGTTTCTGATAAAGACTCCGAAACGGTTGCAGAAGCGATGAAGCAAGCTGGAAGTGCTTTTTCGCTTGTTCGGCCTAAAGTTGAACAAAGTGGTACATCTTCTGTTGGAAGTTCAGCCAGTTCACCTTTAGGTAATACTATTTTACCTCCTGAAGATTTTGGCCAATCAGCTGCAGTTAGTCCACTACAAAGAATGGCTTCAATTACAAATGCGTTAATATCTCAACCTTCTACTCCACATCATCATTCTCCTTCACAAAGACCTTTAAAAGCAGTATTGCCACCAATTACTCAGCAACAATTCGACCAATTCAACAATTTAAATACTGAAGAAATTGTGAGGAAAGTCAAAGAGCAGCTTAGTCAATTCTCAATAAGTCAAAGATTGTTCGGTGAATCGGTATTAGGTTTATCTCAGGGAAGTGTCTCAGACCTTTTAGCCAGACCAAAGCCATGGCATATGTTAACTCAAAAAGGAAGAGAACCTTTTATACGAATGAAAATGTTTTTAGAGGACGATAAAGCTGTACATAAACTAGTTGCTTCCCAGTATAAAATAGCGCCAGAGAAGCTCATGCGAACTGGAGGATATGGGGGAGCTAGTCCTATGAACCAGAATTTAACGAAATCAACACACACATTTGGTGGAAAAATGACCCCATCACCACTCGATCTCTTAAAAGTCAGTGCAGATGTAGATCGTCAAACTCCACATCATCACATTCTTTCTTCTATGTGTAATACCTCTACAACAATGTCAGAGGATTCTGATATAACGTCTTCACTACAATCTCCAAGCACCAATCATCATATTCAACTTCAGTCTCCTGTTGGCTATCACCACGCAACTTCATCTAATGTCTCTTCATTGATGTCCACTGGAAACCAAATGGCATCAATGATTGTCAATGATAATAAAGTTAAAGCGATTCCAATTCCAAACAATGGAATTCCGCAAAACTTGATGTTACAACATGTAGCAGCAGCATTTCAAAACTCTGGAATTCGCCACCCACCACCCGTTGTACCATCAGTCTATGAAATGGCTGCTTTAACGCAAGATCTTGATACACAGACTATAACTACTAAAATCAAAGAAGCTCTATTAGCTAATAATATTGGACAAAAAATTTTTGGAGAAGCCGTATTAGGACTTTCTCAAGGATCAGTGAGTGAATTGCTTTCCAAACCTAAGCCATGGCATATGCTGAGCATCAAAGGCCGGGAACCATTTATTCGCATGCAACTTTGGCTTTCTGATCAACATAACGTAGAAAAATTACAAGCAATTAAAAGCGAACGCAGAGAAATTAACAAGAGAAGACGGGGATCCGGACAACAAGATAATGGAAGTGATACATCATCAAATGACACTTCTGATTTCTATCATAGTGGAACTAGTAGTCCTCCATCTGCTGCGAAAAAACAACGAGTTTTATTTTCTGATGAACAAAAAGAAGCATTGAAATTAGCCTTTGCTTTAGACCAATATCCGAGTGTTGGTACTATTGAATTTCTTGCCTCTGAGTTGAACTTGGCAACTAGAACCATAACAAACTGGTTCCATAACCATAGAATGAGGATTAAACAACAATCACCTCATTCTGATTCTCAACAACAACAGCCACAGGCTGGCTCTGGATTTGATCAAATTCAGTTTAGAATTTTGCTAAGTCATCGACTTGGTTTTGGTGGTCTACCGATTCCATTTAACGCTGGAAATCCTTACTTACAACATGGTACTGATCTCTCCTCCTTCATACCAATGTTGACATCATCGTCTTCAGCTACGGTAGACGAACAAATGTCTGGACTAGACTTGAGCGTAAAACATGAAGTTGATACTGACTTTGATGACGATGATAGTAGATCAGAAGAATCCGAGCCACGAGAAGAAATTCCTGCTTTACCAGTAGTTGGAAGTTCTCGCAGAAAACCAGCAGCACCACAATGGGTTAATCCAGATTGGTTGCAATCTGAACAGAAGCAACAGCAACAATCTGAAGTTATAATTAATGGAGTTTGTGTGATGCAAGCAGCTGACGGTTGTAATGAAAGAAGAAGGTCAGAGACCATTCGGGTGGAACCCTCGGATGTAAACGATGAAGACAAGTCTGGCAGATCTACGCCCTCCGAAACAAGTTCTATGAAACAAGAATCGGATGGTGAACACGAACAAGAAGCAATCAGTGTTAAAGAAGAAAAATCATGGAACAACGAATTTTAG
Protein Sequence
MFFFSQRATLAEKEVTTLKEQLTNNKDKAQDSNVMTMATPLGNHVESTEDQNKTSTELELSTKEKEISQLVDDVRKLQSSIGKLQENTAKEIARLEEELHDKRQHIMRLEARLDAQRDYDEVKRQLCCMKTVECSLDFNNKSPNNYKSETTQSTSPQQHRSSCSPVPDVQNDFSVPVAPPPPGLQNVEQFGPILGEEIVANWRRSLERNNSEQKKVYTSPNRQETTGNENSPDLDSMKTPPLSTSPAPASPANTVQPARPASRSGTPCKSPTSESNSSPRLNSSSPHNNNNNPSQLNNNNNIPAGLINGLCGLNVGLNNNILGPAGALGFDLIKSPFDHRSSYRFGDGDCTMVGRFGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARRVRELLSIHNVGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVMLLKSLIPKKGKDSGIPAVMGRTENDVADERIVHILNEASQMMKPNQQQDDTQSNDDSTSPNQLNSTSPSRQRSKEDIPQEQVARLYQEEFTKIMGKRLEDSMRSGEQPFAGWLFPHFFGNHTGNHEDIRTALDAYHRELSKLQNCPQSQLSGLLALQQQAAVAAMSNNNNNNNNNNTIQGNGMAQDLSLPKDRKDMYSFAQRKDFGVKINGTEVSDKDSETVAEAMKQAGSAFSLVRPKVEQSGTSSVGSSASSPLGNTILPPEDFGQSAAVSPLQRMASITNALISQPSTPHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDKAVHKLVASQYKIAPEKLMRTGGYGGASPMNQNLTKSTHTFGGKMTPSPLDLLKVSADVDRQTPHHHILSSMCNTSTTMSEDSDITSSLQSPSTNHHIQLQSPVGYHHATSSNVSSLMSTGNQMASMIVNDNKVKAIPIPNNGIPQNLMLQHVAAAFQNSGIRHPPPVVPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDQHNVEKLQAIKSERREINKRRRGSGQQDNGSDTSSNDTSDFYHSGTSSPPSAAKKQRVLFSDEQKEALKLAFALDQYPSVGTIEFLASELNLATRTITNWFHNHRMRIKQQSPHSDSQQQQPQAGSGFDQIQFRILLSHRLGFGGLPIPFNAGNPYLQHGTDLSSFIPMLTSSSSATVDEQMSGLDLSVKHEVDTDFDDDDSRSEESEPREEIPALPVVGSSRRKPAAPQWVNPDWLQSEQKQQQQSEVIINGVCVMQAADGCNERRRSETIRVEPSDVNDEDKSGRSTPSETSSMKQESDGEHEQEAISVKEEKSWNNEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01346874;
90% Identity
iTF_01346358;
80% Identity
iTF_00670120;