Nrib003029.1
Basic Information
- Insect
- Nasonovia ribisnigri
- Gene Symbol
- ct
- Assembly
- GCA_027563275.1
- Location
- JANEHQ010000014.1:42897-69616[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-27 4.2e-23 82.0 0.0 3 72 421 491 419 496 0.95 2 3 1.5e-31 5e-27 94.6 0.1 3 77 810 885 808 887 0.96 3 3 1e-31 3.3e-27 95.1 0.1 3 76 1092 1166 1090 1169 0.96
Sequence Information
- Coding Sequence
- ATGAGTCATTCTTGTTGTCCATTTTGTCTTCAATCCGCTGATAACGATCTGATCGATACCAGTAACAGCAGCACCAGTGCACCACCACCGCACTACAACGCCGTCGGCGCTGCAGAATGCAGAGCTACTTTGGCTGAAAAAGAAGTGACTGCCCTTAAGGAACAGTTGACCAACAACAAAGCACAAGACACGAACGTCATGACCATGGCCACGCCTCTGAGCAATCATGTCGAATCCACCGAGGATCAAAATAAAACACCCGCCGAACTTGAACTTTCAGCCAAAGAAAAAGAGATTTCACAATTGGTTGAGGATGTACGCAGACTGCAATCGAGTATCGGTAAACTACAAGATCACACAGCAAAAGAAATTGCCAGACTCGAGGAAGAGTTACATGACAAAAGACAACACATTATGAGACTTGAAGCCAGATTGGACGCTCAGAGAGACTACGAAGAAGTTAAACGACAGCTATGTGTACTGAAGGCCGTCGAATGTTCAGACGACCGTAATAACAAGTCGCCAAACAACAACAAATCTGAAAATACACAAGGCACATCACCTCAACAACAGAGGTCGTCTTGCAGTCCCGTGCCTGAAACTCAAAATGATTTTTCAGTTCCGGTGGCCCCACCCCCTCCCGGGCTACAAAACGTCGAACAGTTTGGCCCGATACTCGGCGAAGAGATCGTGGCCAACTGGCGAAGATCCCTCGAATGCAATAAATATGAACAAAAGAAAGTCTATACTTCTCCAAACCGACATGAAACTACCGACAAGGAAAAGTCACCAGGTCTAGAATCTATCAAAACACCACCACCTAGCACGTCTCCAGCACCAACTTCGCCGTCTATCATGGTTCAACCAGCGCGATCTGCTAGTAGGTCCGGAACACCATGCAAATCGCCCACAAGCGAATCAAACAGTTCACCACGACTTAACAATAGTTCTCCTCATAACAATAACAATAACCCATCTCAGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNTATTCCCGCAGGTCTCATTAATGGTCTCTGTGGTCTTAATGTTGGTCTCAACAATAACATTTTAGGACCTGCTGGTGCTTTAGGGTTTGACTTGATAAAGTCGCCTTTTGATCACAGGTCTCCTTATCGATTTGGAGATGGTGATTGTACCATGGTTGGGCGTTTTGGTGAATCGCTTATACCAAAAGGTGATCCTATGGAAGCTAGACTTCAAGAAATGCTTAGATATAATATGGACAAATATTCTACCCAAAACTTGGATACATTGCACATAGCTCGTCGTGTACGTGAATTACTGTCCATTCATAACGTGGGCCAAAGGTTGTTCGCCAAGTATATTCTAGGACTTTCCCAGGGGACTGTCAGTGAATTGTTGTCAAAACCTAAGCCGTGGGACAAGCTGACCGAAAAGGGACGCGATAGCTATAGGAAAATGCATGCATGGGCATGTGACGAGAACGCGGTTATGCTACTCAAGTCGTTGATTCCGAAAAAAGGTAAAGATTCTGGCATACCTACGGTAATGGGAAGAACTGAAAACGACGTCACCGATGAAAGAATTGTACATATATTGAACGAAGCAAGTCAAATGATGAAACCAAATCAACAACAAGATGATACTCAAAGCAATGACGAAAGCACTTCACCAAATCAATTAACTAGTACTTCCCCGTCCAGACAAAGACCCAAAGAAGACATACCACAAGAACAAGTAGCCCGATTGTATCAAGAAGAGCTATCAAAAATCATGGGCAAACGTTTGGAAGACTCTATGAGAAGTGGTGAACAGCCGTTTGCTGGTTGGCTTTTCCCTCATTTCTTCGGAAATCATACCGGCAACCACGATGATATTCGAACTGCATTGGATGCTTATCACCGAGAATTATCAAAATTACAAAACTGCCCACAGAGCCAATTGTCAGGATTATTAGCTCTTCAACAACAAGCTGCCGTTGCCGCGATATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAACCGGTATTGCTCAAGACTTGTCTTTACCAAAAGACAGAAAAGATATTTATCCATTTGTACAGCGAAAAGATTTTGCTGTTAAAGTAAATGGGACTGAGGTTTCAGACAAAGAGTCTGAAACTGTAGCAGAAGCAATGAAACAGGCCGGAAGTGCTTTTTCACTTGTACGACCTAAAACTGAACAAAGTGGTACATCTTCTGTAGGAAGCTCAGCTAGCTCACCATTAGGTAATACTATTTTACCTCCCGAAGACTTCGGTCAATCGGCTGCAGTCAGTCCACTTCAAAGAATGGCTTCAATTACAAATGCTTTAATTTCTCAACCAGCTACTCCACATCATCATTCTCCTTCGCAAAGACCTTTGAAAGCTGTATTGCCACCAATCACTCAACAACAATTTGACCAATTCAACAATTTGAATACTGAAGAAATTGTGAGGAAAGTCAAAGAGCAACTTAGTCAATTTTCAATCAGTCAGAGACTATTTGGAGAATCTGTATTGGGTCTTTCTCAGGGAAGTGTGTCCGATCTCTTGGCTAGACCAAAACCATGGCATATGTTGACTCAAAAAGGAAGAGAACCCTTTATAAGAATGAAAATGTTTTTGGAGGATGATAAAGCTGTGCATAAACTAGTTGCTTCCCAGTATAAAATAGCCCCAGAAAAGCTTATGCGAACTGGAGGATATGGTGGATCAAGTCGTAAGTATATATTATTTAGCACTACCGAAAAAGACACTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTATGAACCAGAATTTAGTAAAATCAACTCACACTTTTGGTGGTAAAATGACTCCTTCACCTCTCGATCTCTTAAAAGTTAGTGCAGATGTGGATCGCCAAACACCGCATCATCATATACTTACCTCAATGTGTAACACGTCTACAACAATGTCGGAAGACTCTGATATGGCGTCTTCGCTACAATCACCGAGCAACCATCATATTCAACTCCAGTCTCCAGGTGGACATCACCACGCAACATCATCTACTGCTTCATCACTTATGTCCACTGGTAGTCAACTGGCATCGATGATAGTCACTGAAAATAAACTCAAAGCAAGCCCAATACCAAACAATGGAATTCCGCAAAACCTGATGTTACAACACGTGGCTGCAGCTTTCCAAAATCCTGGAACACGTCACCCACCAGCTGTTGTGCCTTCCGTTTATGAGATGGCTGCTCTAACGCAAGATCTTGACACACAAACTATAACTACTAAAATCAAAGAGGCGCTCCTCGCTAATAATATTGGACAAAAAATTTTCGGTGAAGCTGTACTGGGACTCTCTCAAGGATCAGTCAGTGAATTGCTGTCAAAACCTAAGCCATGGCATATGTTGAGCATTAAAGGCCGTGAACCATTCATTCGGATGCAACTTTGGCTATCTGATCAACATAATGTGGAAAGATTGCAAGCGATCAAAAGTGAACGCAGAGAGATGAACAAAAGAAGACGAGGATCTGGCCAACAAGATAATGGAAGTGACACGTCCTCAAACGACACATCAGATTTTTACCACAGTGGCACTAGTAGTCCTCCATCTGCCGCAAAAAAACAACGAGTTCTATTTTCCGATGAACAAAAAGAAGCATTGAAATTAGCATTTGCCCTGGATCAATACCCGAGTGTTGGTACCATTGAGTTTCTTGCATCTGAGTTAAATTTAGCAACTAGAACAATAACGAACTGGTTCCACAACCATAGAATGAGGATCAAGCAACAATCACCTCATTCTGATTCACAGCAACAACAATCACAAACTGGTCCTGGATTTGACCCAATTCAGTTTAGGATTCTCTTGAGCCATCGACTTGGTTTCGGCGGCCTACCAATTCCGTTTAACGCAGGAAACCCTTATTTACAACACGGCGCCGATCTGTCTTCCTTTATACCAATGTTGACGTCATCCTCTTCGGCCACGGTGGACGAACAAATGTCCGGATTGGATTTGAGTGTAAAACACGAAGTAGACACTGACTTTGACGACGAAGACAGCCGGTCGGAAGAGTCGGAGCCTCGAGAAGAAATCCCGGCAGTACCAGTAGTCGGAAGTTCTCGCAGAAAACCAGCTGCTCCACAATGGGTCAACCCGGATTGGTTGCAATCCGAACAGAAGCAACAGCAATCCGAAGTAATAATCAATGGAGTTTGCGTAATGCAAGCGGCCGATGGCTGCACCGAAAGAAGAAGGTCGGAGACCATTCGAGTAGAACCTTCAGATGTAAATGACGAAGACAAGTCTGGTAGATCTACACCATCGGAAGCCAGTTCCTTAAAACAAGAGTCAGATGGCGAACACGAACAGGAAGCTATCAGTGTTAAAGAAGAGAAATCGTGGAACAACGAATTTTAG
- Protein Sequence
- MSHSCCPFCLQSADNDLIDTSNSSTSAPPPHYNAVGAAECRATLAEKEVTALKEQLTNNKAQDTNVMTMATPLSNHVESTEDQNKTPAELELSAKEKEISQLVEDVRRLQSSIGKLQDHTAKEIARLEEELHDKRQHIMRLEARLDAQRDYEEVKRQLCVLKAVECSDDRNNKSPNNNKSENTQGTSPQQQRSSCSPVPETQNDFSVPVAPPPPGLQNVEQFGPILGEEIVANWRRSLECNKYEQKKVYTSPNRHETTDKEKSPGLESIKTPPPSTSPAPTSPSIMVQPARSASRSGTPCKSPTSESNSSPRLNNSSPHNNNNNPSQLXXXXXXXXXIPAGLINGLCGLNVGLNNNILGPAGALGFDLIKSPFDHRSPYRFGDGDCTMVGRFGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARRVRELLSIHNVGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVMLLKSLIPKKGKDSGIPTVMGRTENDVTDERIVHILNEASQMMKPNQQQDDTQSNDESTSPNQLTSTSPSRQRPKEDIPQEQVARLYQEELSKIMGKRLEDSMRSGEQPFAGWLFPHFFGNHTGNHDDIRTALDAYHRELSKLQNCPQSQLSGLLALQQQAAVAAISXXXXXXXXXXXXGTGIAQDLSLPKDRKDIYPFVQRKDFAVKVNGTEVSDKESETVAEAMKQAGSAFSLVRPKTEQSGTSSVGSSASSPLGNTILPPEDFGQSAAVSPLQRMASITNALISQPATPHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDKAVHKLVASQYKIAPEKLMRTGGYGGSSRKYILFSTTEKDTTXXXXXXXXXXXXXXXXXXXXXAMNQNLVKSTHTFGGKMTPSPLDLLKVSADVDRQTPHHHILTSMCNTSTTMSEDSDMASSLQSPSNHHIQLQSPGGHHHATSSTASSLMSTGSQLASMIVTENKLKASPIPNNGIPQNLMLQHVAAAFQNPGTRHPPAVVPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDQHNVERLQAIKSERREMNKRRRGSGQQDNGSDTSSNDTSDFYHSGTSSPPSAAKKQRVLFSDEQKEALKLAFALDQYPSVGTIEFLASELNLATRTITNWFHNHRMRIKQQSPHSDSQQQQSQTGPGFDPIQFRILLSHRLGFGGLPIPFNAGNPYLQHGADLSSFIPMLTSSSSATVDEQMSGLDLSVKHEVDTDFDDEDSRSEESEPREEIPAVPVVGSSRRKPAAPQWVNPDWLQSEQKQQQSEVIINGVCVMQAADGCTERRRSETIRVEPSDVNDEDKSGRSTPSEASSLKQESDGEHEQEAISVKEEKSWNNEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01346874;
- 90% Identity
- iTF_01346358;
- 80% Identity
- iTF_01037618;