Basic Information

Insect: Melanaphis sacchari
Gene Symbol: ct
Assembly: GCA_002803265.2
Location: NW:3262656-3298280[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.5e-27 1.4e-23 82.0 0.0 3 72 407 477 405 482 0.95

2 3 2.9e-31 1.7e-27 94.6 0.1 3 77 797 872 795 874 0.96

3 3 1.9e-31 1.1e-27 95.2 0.1 3 76 1044 1118 1042 1121 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.5e-27	1.4e-23	82.0	0.0	3	72	407	477	405	482	0.95
2	3	2.9e-31	1.7e-27	94.6	0.1	3	77	797	872	795	874	0.96
3	3	1.9e-31	1.1e-27	95.2	0.1	3	76	1044	1118	1042	1121	0.96

Sequence Information

Coding Sequence: ATGGATGTCCAGGCTATGCAGTCTATGGATTGGCTCTTTAAAAAGGAACGTATCTATCTACTGGCTCAATTTTGGCAACagAGAGCTACTTTGGCAGAAAAAGAAGTGACTGCCCTGAAGGAAAAGTTGACCAACAACAAAGCACAAGACACGAACGTCATGACCATGGCCACGCCTCTGAGTAATCATGTCGAATCCACCGAGGATCAAAACAAGACACCTGCCGAACTTGAACTTTCGGCCAAAGAAAAAGAgatttcacAATTGGTGGAGGATGTACGCAGACTGCAATCTAGTATCGGTAAACTACAAGATCACACAGCAAAAGAGATTGCTCGACTTGAAGAAGAGTTACATGATAAAAGACAACACATTATGAGACTTGAAGCCAGATTGGACGCTCAGAGAGACTACGAAGAAGTTAAACGACAGCTATGtgtactGAAGGCCGTCGAATGTTCAGACGACCGTAATAACAAGTCACCAAACAACAACAAATCTGAAAATACACAAGGCACATCACCTCAACAACAACAGAGGTCGTCTTGCAGTCCCGTACCTGAAATTCAAAATGATTTTTCAGTTCCGGTGGCCCCACCCCCTCCCGGGCTACAAAACGTCGAACAGTTTGGCCCGATACTCGGCGAAGAGATCGTGGCCAACTGGCGAAGATCCCTCGAATGcaataaatatgaacaaaaGAAAGTCTATACTTCTCCAAACCGACATGAAACTACCGacaagGAAAAATCACCAGGTTTAGAATCTATCAAAACACCACCTCCGAGCTCGTCTCCAGCACCTACTTCACCGTCTATCACGGTTCAACCAGCGCGATCTGCTAGTAGGTCCGGAACACCATGCAAATCGCCTACAAGTGAATCAAACAGTTCACCGCGACTAAACAATAGTTCtcctcataataataacaataacccATCTCAGttgaacaacaacaacaacaacaatattcCCGCAGGCCTCATAAATGGTCTCTGTGGTCTTAATGTTGGTCtcaacaataacattttaggaCCTGCTGGTGCTTTAGGCTTTGACTTGATAAAGTCGCCTTTTGATCACAGGTCTCCTTATCGATTTGGAGATGGTGATTGTACCATGGTTGGACGTTTTGGCGAATCACTTATACCGAAAGGTGATCCTATGGAAGCTAGACTTCAAGAAATGCTCAGgtataatatggaCAAATATTCTACCCAAAACTTGGATACATTACATATAGCTCGTCGCGTACGTGAACTACTATCCATCCATAACGTGGGCCAAAGGTTGTTTGCCAAATATATTCTCGGACTTTCCCAAGGGACCGTCAGTGAATTGTTGTCAAAACCTAAGCCGTGGGACAAGCTGACTGAAAAGGGACGCGATAGCTATAGGAAAATGCATGCATGGGCATGTGACGAGAACGCGGTTATGCTACTCAAGTCGTTGATACCGAAAAAAGGTAAAGACTCTGGCATACCTACGGTAATGGGAAGAACTGATAATGACGTCACCGATGAAAGGATTGTACATATATTGAACGAAGCAAGTCAAATGATGAAACCTAATCAACAGCAAGACGATACTCAAAGCAATGACGAAAGCACTTCACCAAATCAATTAattagGAGTACTTCCCCGTCCAGACAAAGACCCAAAGAAGATATTCCGCAAGAACAAGTAGCCCGGCTGTACCAAGAAGAGCTATCTAAAATCATGGGAAAACGTTTAGAAGACTCTATGAGAAGCGGCGAACAGCCGTTTGCAGGctgGCTTTTCCCTCATTTCTTCGGAAATCATACTGGCAACCACGATGATATTCGAACTGCATTAGATGCTTATCACCgagaattatcaaaattacaaaactgCCCACAGAACCAATTGTCAGGATTATTAGCTCTTCAACAACAAGCTGCCGTTGCAGCAATGtcaaacaacaacaataataacaataacaatactatACAAGGAACTGGTATAGCCCAAGACTTGTCTTTACCAAAAGATAGAAAAGATATATATCCGTTTGTACAACGAAAAGATTTTGCTGTTAAAGTAAATGGAACTGAGGTTTCAGACAAAGAGTCTGAAACTGTAGCAGAAGCAATGAAACAAGCCGGAAGTGCTTTTTCACTTGTGCGACCTAAGACAGAACAAAGTGGTACATCTTCTGTAGGAAGCTCAGCTAGCTCACCATtaggtaacaatattttacctcCCGAGGATTTCGGTCAATCTGCTGCAGTCAGTCCACTTCAAAGAATGGCTTCAATTACAAACGCTTTAATTTCTCAACCCACAACTCCACATCATCATTCTCCTTCGCAGAGACCTCTAAAAGCTGTATTGCCACCAATTACTCAGCAACAATTTgaccaatttaataatttgaatactgAAGAAATTGTAAGGAAAGTCAAAGAGCAACTTAGTCAATTTTCAATCAGTCAAAGACTATTCGGAGAATCTGTATTGGGTCTTTCTCAAGGAAGTGTATCCGATCTCTTGGCTAGACCAAAACCATGGCATATGTTGACTCAAAAAGGAAGAGAACCTTTTATAAggatgaaaatgtttttggaGGATGATAAAGCTGTACATAAACTAGTTGCTTCCCAATATAAAATTGCACCAGAGAAGCTTATGCGAACTGGAGGATATGGTGGATCAAGtcctaTGAATCAGAATTTAGTAAAATCAACACACACTTTTGGTGGTAAAATGACCCCTTCACCTCTCGATCTCTTAAAAGTTAGTGGAGATGCGGATCGCCAAACACCACATCATCATATACTTACCTCAATGTGCAACACGTCTACAACAATGTCAGAAGATTCTGATATGGCGTCTTCACTACAATCGCCAAGCAACCATCATATACAACTTCAGTCTCCAGGTGGACATCACCACGCAACTTCATCTACTGCTTCTTCATTAATATCAACGGGTAGTCAACTTGCATCTATGATGGTCACTGACAATAAACTTAAAGCAAGTCCAATACCAAATAACGGAATTCCGCAAAACCTGATGTTACAACACGTGGCTGCAGCTTTCCAAAATTCGGGAACACGTCATCCACCTGCAGTTGTGCCATCAGTTTACGAGATGGCTGCTCTAACGCAAGATCTAGACACACAGACTATTACTACTAAAATCAAAGAAGCACTCCTCGCTAATAATATTGgacaaaaaattttcggTGAAGCTGTACTGGGACTCTCTCAGGGATCAGTTAGTGAATTGCTATCAAAGCCTAAGCCATGGCATATGCTAAGCATTAAAGGCCGTGAACCATTCATCCGAATGCAACTTTGGCTATCTGATCAACATAATGTGGAAAGATTGCAAGCTATTAAAAGTGAACGGAGAGAGTTGAACAAAAGAAGACGAGGTTCTGGACAACAAGACAATGGAAGTGACACATCTTCGAATGACACTTCGGACTTTTATCACAGTGGTACTAGTAGTCCTCCATCTGCCGCAAAAAAACAACGAgttcTATTTTCCGATGAACAAAAAGAAGCATTGAAATTAGCGTTTGCCCTGGATCAATACCCAAGTGTGGGTACAATTGAGTTTCTTGCATCGGAATTAAATTTAGCGACTAGGACAATAACGAACTGGTTCCACAATCATAGAATGAGAATTAAGCAACAATCTCCTCATTCTGATTCACAGCAACAACAATCACAAACTGGTCCTGGATTCGACCCAATTCAGTTTAGAATTCTCTTAAGTCATCGACTAGGTTTCGGTGGCCTTCCAATACCGTTTAATGCAGGAAACCCTTATTTGCAACATGGCACTGATCTATCTTCTTTCATACCAATGTTGACATCATCCTCTTCTGCCACTGTGGATGAGCAAATGTCCGGATTGGATTTGAGCGTGAAACACGAAGTAGATACTGACTTTGATGACGAAGACAGCCGGTCGGAAGAATCGGAACCTAGAGAAGAAATCCCGGCCGTACCTGTAGTCGGAAGTTCTCGCAGAAAACCAGCTGCTCCACAATGGGTCAACCCAGATTGGTTGCAATCCGAACAGaagcagcaacagcagcaatccgaagtaattataaatggcGTTTGCGTAATGCAAGCGGCTGATGGTTGCGCTGAGAGAAGAAGATCGGAGACCATTCGAGTAGAACCGTCGGATGTCAACGACGAAGATAAGTCTGGTAGATCTACACCATCAGAAGCCAGTTCCTTAAAACAAGAATCAGATGGCGAACACGAACAGGAAGCTATCAGTGTTAAGGAAGAGAAATCGTGGAACAACGAATTTTAG
Protein Sequence: MDVQAMQSMDWLFKKERIYLLAQFWQQRATLAEKEVTALKEKLTNNKAQDTNVMTMATPLSNHVESTEDQNKTPAELELSAKEKEISQLVEDVRRLQSSIGKLQDHTAKEIARLEEELHDKRQHIMRLEARLDAQRDYEEVKRQLCVLKAVECSDDRNNKSPNNNKSENTQGTSPQQQQRSSCSPVPEIQNDFSVPVAPPPPGLQNVEQFGPILGEEIVANWRRSLECNKYEQKKVYTSPNRHETTDKEKSPGLESIKTPPPSSSPAPTSPSITVQPARSASRSGTPCKSPTSESNSSPRLNNSSPHNNNNNPSQLNNNNNNNIPAGLINGLCGLNVGLNNNILGPAGALGFDLIKSPFDHRSPYRFGDGDCTMVGRFGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARRVRELLSIHNVGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVMLLKSLIPKKGKDSGIPTVMGRTDNDVTDERIVHILNEASQMMKPNQQQDDTQSNDESTSPNQLIRSTSPSRQRPKEDIPQEQVARLYQEELSKIMGKRLEDSMRSGEQPFAGWLFPHFFGNHTGNHDDIRTALDAYHRELSKLQNCPQNQLSGLLALQQQAAVAAMSNNNNNNNNNTIQGTGIAQDLSLPKDRKDIYPFVQRKDFAVKVNGTEVSDKESETVAEAMKQAGSAFSLVRPKTEQSGTSSVGSSASSPLGNNILPPEDFGQSAAVSPLQRMASITNALISQPTTPHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDKAVHKLVASQYKIAPEKLMRTGGYGGSSPMNQNLVKSTHTFGGKMTPSPLDLLKVSGDADRQTPHHHILTSMCNTSTTMSEDSDMASSLQSPSNHHIQLQSPGGHHHATSSTASSLISTGSQLASMMVTDNKLKASPIPNNGIPQNLMLQHVAAAFQNSGTRHPPAVVPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDQHNVERLQAIKSERRELNKRRRGSGQQDNGSDTSSNDTSDFYHSGTSSPPSAAKKQRVLFSDEQKEALKLAFALDQYPSVGTIEFLASELNLATRTITNWFHNHRMRIKQQSPHSDSQQQQSQTGPGFDPIQFRILLSHRLGFGGLPIPFNAGNPYLQHGTDLSSFIPMLTSSSSATVDEQMSGLDLSVKHEVDTDFDDEDSRSEESEPREEIPAVPVVGSSRRKPAAPQWVNPDWLQSEQKQQQQQSEVIINGVCVMQAADGCAERRRSETIRVEPSDVNDEDKSGRSTPSEASSLKQESDGEHEQEAISVKEEKSWNNEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01346874;
90% Identity: iTF_01346358;
80% Identity: iTF_00972941;