Basic Information

Insect: Aphis gossypii
Gene Symbol: ct
Assembly: GCA_004010815.1
Location: NW:2166-24010[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.3e-27 1.5e-23 82.1 0.0 3 72 350 420 348 425 0.95

2 3 2.8e-31 1.7e-27 94.7 0.1 3 77 740 815 738 817 0.96

3 3 1.8e-31 1.2e-27 95.3 0.1 3 76 986 1060 984 1063 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.3e-27	1.5e-23	82.1	0.0	3	72	350	420	348	425	0.95
2	3	2.8e-31	1.7e-27	94.7	0.1	3	77	740	815	738	817	0.96
3	3	1.8e-31	1.2e-27	95.3	0.1	3	76	986	1060	984	1063	0.96

Sequence Information

Coding Sequence: atgtggtgtacttatttatattatacggttttggtttacaattttttttttacgattatcTTTTCACTTTTTCAGAGAGCTACTTTGGCGGAAAAAGAAGTGACTACCCTGAAGGAACAGTTGACCAACAACAAAGCACAAGACACGAACGTCATGACCATGGCCACGCCTCTGAGCAATCATGTCGAATCCACCGAGGATCAAAACAAGACACCTGCCGAACTTGAACTTTCGGCCAAAGAAAAAGagatttcacAATTGGTGGAGGATGTACGCAGACTGCAATCTAGTATCGGTAAACTACAAGATCACACAGCAAAAGAGATCGCCAGACTCGAAGAAGAGTTACATGACAAAAGACAACACATTATGAGACTTGAAGCCAGATTGGACGCTCAGAGAGACTACGAAGAAGTTAAACGACAGCTATGtgtacTGAAGGCCGTCGAATGTTCAGATGACCGTACTAACAAGTCACCAAACAACAACAAATCTGAAAATACACAAGGCACATCGCCTCAACAACAGAGGTCGTCTTGCAGTCCAGTGCCTGAAATTCAAAacaagGAAAAGTCACCAGGCCTAGAATCTATTAAAACACCACCTCCGAGCACGTCTCCAGCACCTACTTCACCGTCTATCATGGTTCAACCAGCGCGATCTGCTAGTAGGTCCGGAACACCATGCAAATCGCCCACAAGTGAATCGAACAGTTCACCACGACTTAACAATAGTTCTCCtcataacaacaacaataacccATCTCAGttgaacaacaacaacaataataacaacaatatccCTGCAGGCCTCATAAATGGTCTCTGTGGTCTTAATGTTGGTCtcaacaataacattttaggaCCTGCTGGTGCTTTAGGCTTTGACTTGATAAAGTCGCCTTTTGATCACAGGTCTCCTTATCGATTTGGAGATGGTGATTGTACCATGGTTGGACGTTTTGGTGAATCACTTATACCGAAAGGTGATCCTATGGAAGCTAGACTCCAAGAAAtgcttaggtataatatggaCAAATATTCTACCCAAAACTTGGATACATTGCATATAGCTCGTCGCGTACGTGAACTACTATCCATCCATAACGTGGGCCAAAGGTTGTTTGCCAAATATATTCTCGGGCTTTCCCAAGGGACCGTCAGTGAATTGTTGTCAAAACCTAAGCCATGGGACAAGCTGACCGAAAAGGGACGCGATAGCTATAGGAAAATGCATGCATGGGCATGTGACGAGAACGCGGTTATGCTACTCAAGTCGTTGATACCGAAAAAAGGTAAAGACTCTGGCATACCTACGGTCATGGGAAGAAATGAAAACGACGTCACCGATGAAAGGATTGTACACATATTGAACGAAGCGAGTCAAATGATGAAACCTAACCAACAACAAGACGATACTCAAAGCAATAATGAAAGCACTTCACCAAatcaattaattagGAGTACTTCTCCGTCCAGACAAAGACCTAAAGAAGATATACCACAAGAACAAGTGGCCCGACTGTATCAAGAAGAGCTATCCAAAATCATGGGCAAACGTTTGGAAGACTCCATGAGAAGCGGTGAACAGCCATTTGCAGGctgGCTCTTCCCTCATTTCTTCGGAAATCATACCGGCAACCACGATGATATTCGAACTGCGTTAGATGCTTATCACCGAGAATTGTCAAAGTTACAAAACTGTCCACAGAGCCAACTGTCAGGATTATTAGCTCTTCAACAACAAGCTGCCGTTGCAGCAATGtcaaacaacaacaataataacaataacaataccaTACAAGGAACCGGTATGGCTCAAGACTTGTCCTTACCAAAAGACAGAAAAGATATTTATCCGTTTGTACAACGAAAAGATTTTGCTGTTAAAGTAAATGGAACTGACGTTTCAGACAAAGAGTCTGAAACTGTAGCAGAAGCAATGAAACAAGCCGGGAGTGCTTTTTCGCTAGTTCGACCTAAAACTGAACAAAGTGGTACATCTTCTGTAGGAAGCTCAGCTAGCTCAccattaggtaataatattttacctccTGAGGACTTCGGTCAATCGGCTGCAGTCAGTCCACTCCAAAGAATGGCTTCAATTACAAATGCTTTAATTTCTCAACCCGCTACTCCACATCATCATTCTCCTTCACAGAGACCTCTGAAAGCTGTATTGCCACCAATAACTCAACAACAATTTGACCAATTTAACAATCTGAATACTGAAGAAATTGTGAGAAAAGTCAAAGAGCAACTTAGTCAATTTTCGATCAGTCAGAGACTATTTGGAGAATCTGTGTTGGGTCTTTCTCAAGGAAGTGTGTCCGATCTCTTGGCTAGACCAAAACCATGGCATATGTTGACTCAAAAAGGAAGAGAACCTTTTATAagaatgaaaatgtttttggaaGATGACAAAGCTGTGCATAAACTAGTTGCttcacaatataaaattgcaCCAGAGAAGCTTATGCGAACTGGAGGATACGGTGGATCAAgtcctATGAATCAGAATTTAGTAAAGTCAACACACACTTTCGGTGGTAAAATGACCCCTTCACCACTTGATCTCTTAAAAGTTAGTGATGTGGATCGCCAAACACCACATCATCATATTCTTACCTCAATGTGCAACACGTCTACAACAATGTCAGAAGATTCTGATATGGCGTCTTCACTGCAATCGCCGAGCAACCATCATATTCAAATTCAGTCTCCAGGTGGGCATCACCACGCAACTTCGTCTACTGCTTCTTCATTGATATCTACGGGTAGTCAACTTGCATCTATGATGGCCActgataataaacttaaagcaAGTCCAGTACCAAACAATGGAATTCCGCAAAACCTGATGTTACAACACGTGGCTGCAGCTTTCCAAAATTCTGGAACACGTCACCCACCAGCAGTTGTACCATCAGTCTATGAGATGGCTGCTCTAACGCAAGATCTTGATACACAGACTATTACTACTAAAATAAAGGAAGCACTACTCGCTAATAATATTGgacaaaaaattttcggTGAAGCTGTACTTGGACTCTCTCAGGGATCAGTTAGTGAATTGCTATCAAAACCTAAGCCATGGCATATGCTGAGCATTAAAGGCCGTGAACCATTCATTCGGATGCAACTTTGGTTATCTGATCAACATAATGTGGAAAGATTACAAGCGATTAAAAGTGAAAGGAGAGAGTTGAACAAAAGAAGACGAGGATCTGGACAACAAGACAATGGAAGTGACACATCTTCAAATGACACTTCAGATTTTTACCACAGTGGCACTAGTAGTCCTCCATCTGCTGCTAAAAAACAACGAgtTCTGTTTTCCGATGAACAAAAAGAAGCATTGAAACTAGCGTTTGCCCTGGATCAATACCCGAGTGTGGGTACAATCGAGTTTCTTGCATCGGAATTGAATTTAGCGACTAGGACAATAACGAACTGGTTCCATAACCATAGAATGAGAATCAAGCAACAATCTCCTCATTCTGATTCACAGCAACAACAATCACAAACTGGTCCTGGATTCGATCCGATTCAGTTTAGAATTCTCTTAAGCCATCGACTAGGTTTTGGTGGCCTCCCGATACCATTTAACGCAGGCAACCCTTATTTACAACATGGCGCCGATCTGTCTTCCTTCATACCAATGTTGACGTCGTCCTCTTCGGCTACCGTGGATGAACAAATGTCCGGATTGGATTTGAGCGTGAAACACGAAGTAGACACTGACTTTGATGACGAAGATAGCCGGTCGGAAGAGTCGGAACCTCGAGAAGAAATCCCGGCCGTACCTGTAGTTGGAAGTTCTCGCAGAAAACCAGCTGCTCCACAATGGGTGAACCCCGATTGGTTGCAATCCGAACAGaagcaacagcaacagcaatCCGAAGTCATTATAAACGGCGTTTGCGTAATGCAAGCGGCCGATGGCTGTGCCGAAAGAAGAAGGTCGGAAACCATTCGAGTAGAACCATCGGATGTTAACGACGAAGACAAGTCTGGTAGATCTACACCATCGGAAACAAGTTCCTTAAAACAAGAATCAGATGGTGAACACGAACAGGAAGCCATCAGTGTTAAGGAAGAGAAATCGTGGAACAACGAATTTTAG
Protein Sequence: MWCTYLYYTVLVYNFFFTIIFSLFQRATLAEKEVTTLKEQLTNNKAQDTNVMTMATPLSNHVESTEDQNKTPAELELSAKEKEISQLVEDVRRLQSSIGKLQDHTAKEIARLEEELHDKRQHIMRLEARLDAQRDYEEVKRQLCVLKAVECSDDRTNKSPNNNKSENTQGTSPQQQRSSCSPVPEIQNKEKSPGLESIKTPPPSTSPAPTSPSIMVQPARSASRSGTPCKSPTSESNSSPRLNNSSPHNNNNNPSQLNNNNNNNNNIPAGLINGLCGLNVGLNNNILGPAGALGFDLIKSPFDHRSPYRFGDGDCTMVGRFGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARRVRELLSIHNVGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVMLLKSLIPKKGKDSGIPTVMGRNENDVTDERIVHILNEASQMMKPNQQQDDTQSNNESTSPNQLIRSTSPSRQRPKEDIPQEQVARLYQEELSKIMGKRLEDSMRSGEQPFAGWLFPHFFGNHTGNHDDIRTALDAYHRELSKLQNCPQSQLSGLLALQQQAAVAAMSNNNNNNNNNTIQGTGMAQDLSLPKDRKDIYPFVQRKDFAVKVNGTDVSDKESETVAEAMKQAGSAFSLVRPKTEQSGTSSVGSSASSPLGNNILPPEDFGQSAAVSPLQRMASITNALISQPATPHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDKAVHKLVASQYKIAPEKLMRTGGYGGSSPMNQNLVKSTHTFGGKMTPSPLDLLKVSDVDRQTPHHHILTSMCNTSTTMSEDSDMASSLQSPSNHHIQIQSPGGHHHATSSTASSLISTGSQLASMMATDNKLKASPVPNNGIPQNLMLQHVAAAFQNSGTRHPPAVVPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDQHNVERLQAIKSERRELNKRRRGSGQQDNGSDTSSNDTSDFYHSGTSSPPSAAKKQRVLFSDEQKEALKLAFALDQYPSVGTIEFLASELNLATRTITNWFHNHRMRIKQQSPHSDSQQQQSQTGPGFDPIQFRILLSHRLGFGGLPIPFNAGNPYLQHGADLSSFIPMLTSSSSATVDEQMSGLDLSVKHEVDTDFDDEDSRSEESEPREEIPAVPVVGSSRRKPAAPQWVNPDWLQSEQKQQQQQSEVIINGVCVMQAADGCAERRRSETIRVEPSDVNDEDKSGRSTPSETSSLKQESDGEHEQEAISVKEEKSWNNEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01346874;
90% Identity: iTF_01346358;
80% Identity: iTF_00136028;