Sver018690.1
Basic Information
- Insect
- Shargacucullia verbasci
- Gene Symbol
- Mblk-1
- Assembly
- GCA_947562105.1
- Location
- OX387302.1:2700899-2734854[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-13 7.4e-11 41.9 0.0 1 37 255 292 255 296 0.92 2 2 1.7e-18 1.1e-15 57.4 0.0 1 43 464 507 464 509 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGAAGAAAATGGAAACTATATCAGGACGCGTTAATTCCAAAACGGGGGGAGGGAGAACGTTCCAGCGACGAGGAATCGGTCCAGACAGACCCGCCACCAGCTCTGAAAATCAAGACCATCGAGCAGATAAACGAAGACGAGGCAAAGGACGAGAGGGTGGAAGACAAGGCGCCCCGACGGCCAGAGACGATCTTAGAGTCTTTGATCAAGAGGCCAGCCACACAACCCAAACTGGAGGTCCCGGAAGAACCAGCAGATTGGAAACCGCAGGACAAATGCTACTTCTGTACGGATGGTGAGCCGGGAGGGGGCGAGACCAGGCCGGGCGGCGCTACGAGTCCCGCATCGGAGTCGGACAGCAGTTCGGTGTCGGGGGCCAAGAGCCCGGCGTCGGCGCCGCCACTGCTGCAGCATCTGCTTCAACTGCAGGCGCAGAACCCACAGACTATAGCACAGTTTCAGCAGATGCTGACGGCGCTGGCGGCGCTGGGCAGTGGGCTGGTGCCGCCGCCGCCCCTCACGCAGCCCTGGATGATGCAGCGGCTGGTGCATAGGCAGACCGACAGGCTACCAGAAGTGGGTGAAAAGGCGCCGGCGTCATCATCACCCAACCTTGCTGAGCAGCCGCTCGACTTGAGCGCTAAGTCTACCTCCAGCACAAGTGGCACACCACCTCCTGACGCCAAGCTCTTGGATAACAGATTGAAACGAGCAGTTCTAGAGAGCGCTAGCAATAGTTCTGGTCGTCGAGCATACACTGACGATGAGCTGCAGTCTGCCGTGCGTGACATACAGTCAGGCAGGCTGGGCACCAGACGAGCCGCCATGATCTACGGTATACCGCGCTCCACCCTGCGCAACAAACTCAACAAGTTTGGCACCGTCATCGACCACGCTGATTCAGAAAATGACAGCGATGCCGACCGCCCCGACTCGCCCCCTTCGGTCATCCTCAAAATACCAACATTCCCCCCGCCCGACGATAAGAGTCCCTCCCCCGCTGGGCAAGTCCAAACCCCAATCGCGCCTATCACCCCAATGATTCCAACGCAGGCCTCGCTCAAAGCACCTTCACAACTGCTTCTCCCGCCCTCGGTGTTTGCTGACCCCCCCTCAACCCAACACCTCTTTACGTCTCTTAGCGACGTCATCGCCAAGAGCATCAGCCAGAAGTTCCAGCAACCACTAGACAGGCCTCATCACCAACCGGGTGATCTTTTATATGCGCGAGGACCCGACCGGCACGTCTCCGTTATAAAAACGCCACCAGATAATCAACGCTACCCTGCACCTGGCAACTCCAAGGCCGCACCAAACAACAACGGTCAACCAGCCGCCGGCGGCAAGGGTACGCGACCCAAGCGTGGCAAATACAGAAACTATGACCGTGACAGCCTCGTGGAAGCCGTGAAGGCGGTGCAGCGAGGCGAGATGTCGGTGCACCGTGCTGGCTCGTACTACGGCGTGCCACACTCCACGCTTGAGTATAAGGTCAAAGAACGACACCTTATGCGGCCGCGGAAACGAGAGCCCAAGCCTCCCCAGGATGCTAAGCCGCAACCGCCGAAGCCTCAACCACCGAAACCACCAACAAAGCCGTTTTCCAATGGACTGAACGGGCCAGAAGCACCAGGCTATCCTCCCGGCTACCCGTTCTGGCCAGGCAGCGGATTTCCTCCGCCTCCAGCACCGGACTTGTACGCATCGCATATGATGCGACGTCTGCGTGAAGAAGCGCCTCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCCGGTCCAGTCTGGAGCGACCTGCGCTCCTGCAGCGACTAGCGGCGCCCCCGGGCGGTGAGCCAGTGCGCCGGCCTCCCACGTCGGACGGCGACGAGCCTCCGGCGCGCCGGCCGCGCCTCGACAGCTCAGACCAGGCTCTGGCGGCGGAGATGCGCGAGGCGGTACAGCGACTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACACCCACGCCACCGCCTGCGCCACCAGCCGAGCCGCCACCGCCACCGGCCGCGCCGCCGGACCGCGCCTAG
- Protein Sequence
- MGRRKWKLYQDALIPKRGEGERSSDEESVQTDPPPALKIKTIEQINEDEAKDERVEDKAPRRPETILESLIKRPATQPKLEVPEEPADWKPQDKCYFCTDGEPGGGETRPGGATSPASESDSSSVSGAKSPASAPPLLQHLLQLQAQNPQTIAQFQQMLTALAALGSGLVPPPPLTQPWMMQRLVHRQTDRLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDAKLLDNRLKRAVLESASNSSGRRAYTDDELQSAVRDIQSGRLGTRRAAMIYGIPRSTLRNKLNKFGTVIDHADSENDSDADRPDSPPSVILKIPTFPPPDDKSPSPAGQVQTPIAPITPMIPTQASLKAPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQPGDLLYARGPDRHVSVIKTPPDNQRYPAPGNSKAAPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDAKPQPPKPQPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPPGGEPVRRPPTSDGDEPPARRPRLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00785924; iTF_01361508; iTF_00785126; iTF_00177032; iTF_00363944; iTF_00726213; iTF_00172647; iTF_00237384; iTF_01230447; iTF_00973681; iTF_01221416; iTF_00186060; iTF_00185232; iTF_00327007; iTF_00001100; iTF_01363020; iTF_00018096; iTF_00017261; iTF_01285463; iTF_01538655; iTF_00783348; iTF_00784316; iTF_01487639; iTF_00383544; iTF_00171678;
- 80% Identity
- -