Hzea017257.1
Basic Information
- Insect
- Helicoverpa zea
- Gene Symbol
- Mblk-1
- Assembly
- GCA_002150865.1
- Location
- KZ117279.1:38394-73492[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-13 1.3e-10 40.9 0.0 1 38 281 319 281 325 0.91 2 2 1.5e-18 1e-15 57.2 0.0 1 43 490 533 490 535 0.95
Sequence Information
- Coding Sequence
- ATGAGTGTAAAGCCTGACTCACACGGGGTTAGTTGCTGGATAGACTACTCGCAAGGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATATCAGGACGCGTTAATTCCAAAACGGGGGGAGGCAGAGTTATCCAGCGACGAGGAATCGGTCCAGACAGACCCTCCACCGGCCTTGAAGATCAAGACTATAGAGCAGATCAACGAGGACGACGCGAAGGAAGACAGGGTGGAGGAGAAGGCTCCTCGAAGGCCGGAGACGATCCTCGAATCGCTGATCAAGAGGCCGGCCACGCAGCCCAAGCTGGAGGTGTCAGAGGAACCTGCAGACTGGAAGCCACAGGACAAATGCTACTTCTGTACGGATGGTGAGCCTGGAGGGGGGGAGACCAGGCCCGCCGGTGCTATGAGTCCCGCATCGGAGTCGGACAGCAGTTCGGTGTCGGAGGCGAAGAGTCCTGCGTCTGCGCCGCCCCTGCTGCAGCATCTGCTGCAACTGCAGGCGCAGAACCCGCAGACTATAGCACAGTTTCAGCAGATGCTGACGGCTCTGGCGGCGCTGGGCAGCGGTCTggtgccgccgccgccgctctcGCAACCCTGGATGATGCAGCGGCTCGTGCATAGGCAGACCGATAGGCTACCCGAGGTCGGGGAGAAGGCGCCGGCGTCTTCCTCGCCCAACCTTGCGGAGCAGCCCCTCGACCTGAGCGCCAAGTCCACCTCCAGCACCAGTGGTACTCCGCCTCCTGATGCCAAGTTACTGGATAACAGATTGAAGCGAGCTGTACTCGAGGGCGCCGGCAACAGCGGGCGGCGCGCCTACACGGAGGAGGAGCTGCAGGCGGCGGTGCGCGACATCCAGGCTGGCCGGCTCGGCACGCGTCGCGCCGCGCTCGTCTACGGCATCCCGCGCTCCACGCTGCGCAACAAGCTCAACAAGTTCGGCACCCCGCTCGACCACCCCGACTCCGACAACGACAGCGATGCCGACCGCCCCGACTCGCCCCCCTCCGTCATCCTCAAGATACCGACCTTCCCCCCGCCCGACGACAAGAGCCCCTCCCCCGCAGGACAAGTGCAAGCCCCCATCGCGCCGATAACGCCACTGATCCCCACGTCACCGGCCATCAAGGCACCCTCACAGCTGCTGCTCCCGCCCTCCGTGTTCGCCGACCCTCCCTCGACGCAACACCTCTTCACGTCTCTTAGCGACGTCATCGCTAAAAGCATCAGCCAGAAGTTCCAGCAACCCCTAGATAGGCCACACCATCAGCCCAGTGAACTGATGTACGCGCGCGGCCCCGACCGGCACGTGTCCGTCATCAAAACTCCACCCGACAACCAACGCTACCCCGCGCCCGGCAACTCTAAAGCCACTCCGAACAACAACGGGCAGCCGGCCACTGGCGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGCAACTACGACCGCGACAGCCTCGTGGAGGCCGTGAAGGCGGTGCAGCGCGGCGAGATGTCGGTGCACCGCGCCGGCTCGTACTACGGCGTGCCGCACTCTACGCTCGAGTACAAGGTCAAGGAGCGCCACCTCATGCGTCCGCGCAAGCGCGAGCCCAAGCCGCCGCAGGACGCCAAGCCGCAGCCGCCCAAGCCGCCACCTCCCAAACCGCCGACGAAACCGTTCTCCAACGGACTCAACGGGCCGGAGGGTCCGGGCTATCCCCCCGGCTACCCCTTCTGGCCGGGCAGCGGGTTCCCCCCGCCGCCCGCTCCCGACTTGTACGCGTCGCACATGATGCGACGACTGCGTGAAGAGGCGCCTCCGCCCGCCAACGGGTCGTTCCTGGAGGGCATCATCCGtaCATTCCGCCGGGCGGCCCGACGCTCGCCGCTCACGCTAGTGCAATACGGCCCGCTGAGGTTCGTCGTCCGAGACTCGCGTATCCGTGTATACTGTTGTAGTGACAATAACTTAGTCGCAGGCTTCTCGCGCGGGCGCCGTGTCCGACGCTCGACGCTCTTCACCGAGATTCGGATGCCGTCGGTTGTGACTTGCAGTCGCGTTGCATGTGCCTCGAGCTCATCACTAGCCGAGCTATGGGAGAACTGTTCGGTCACGTGGCGAGCAGTCGCAGCTGTTGTCTGTGGGCGATACCACTGCAGGGTAGAACGACACTGCACGTTGCAAGCGGCGCTAGGGTTGTCCAAAATTCACGCAAATCCAGAGAGCCTCAAATTTTGA
- Protein Sequence
- MSVKPDSHGVSCWIDYSQGLERVAEELMGRRKWKLYQDALIPKRGEAELSSDEESVQTDPPPALKIKTIEQINEDDAKEDRVEEKAPRRPETILESLIKRPATQPKLEVSEEPADWKPQDKCYFCTDGEPGGGETRPAGAMSPASESDSSSVSEAKSPASAPPLLQHLLQLQAQNPQTIAQFQQMLTALAALGSGLVPPPPLSQPWMMQRLVHRQTDRLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDAKLLDNRLKRAVLEGAGNSGRRAYTEEELQAAVRDIQAGRLGTRRAALVYGIPRSTLRNKLNKFGTPLDHPDSDNDSDADRPDSPPSVILKIPTFPPPDDKSPSPAGQVQAPIAPITPLIPTSPAIKAPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQPSELMYARGPDRHVSVIKTPPDNQRYPAPGNSKATPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDAKPQPPKPPPPKPPTKPFSNGLNGPEGPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRTFRRAARRSPLTLVQYGPLRFVVRDSRIRVYCCSDNNLVAGFSRGRRVRRSTLFTEIRMPSVVTCSRVACASSSSLAELWENCSVTWRAVAAVVCGRYHCRVERHCTLQAALGLSKIHANPESLKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_01342136;
- 80% Identity
- -