Pumb024660.1
Basic Information
- Insect
- Pyrrhia umbra
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963891755.1
- Location
- OY982940.1:2715057-2733651[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-14 8.2e-11 42.3 0.0 1 36 104 140 104 146 0.93 2 2 9e-19 1.2e-15 57.8 0.0 1 43 314 357 314 359 0.95
Sequence Information
- Coding Sequence
- ATGTCTCGAAGAAATGTGGACAATAACATCACAACAGCTTTGTGGCTGGCCGAGACGACGCTATGCTGTGAACGAGAATATTACGATACTAAACATGGTACCACAATGGTAGTGACTAGGCTGCCGGAGGTTGGTGAGAAGGCGCCGGCGTCTTCATCCCCCAACCTAACGGAACAGCCGCTCGACCTGAGCGCCAAGTCTACCTCCAGCACCAGCGGAACTCCACCTCCTGACGCCAAGCTCTTGGATAACAGATTGAAGCGTGCGGTCCTCGAGGGCGCCAGCAACAGTTCCGGGCGCCGCACGTACACGGAGGACGAGCTGCAGTCGGCCGTGCGCGACATCCAGTCGGGCCGGCTGGGCACCCGGCGCGCCGCCCTCATCTACGGCATCCCGCGCTCCACGCTGCGCAACAAACTCAACAAGTTCGGCAGCGCCGTCGACCACGCTGACTCAGACAATGACAGCGATGCCGACCGCGCCGACTCGCCCCCTTCCGTCATCCTTAAAATACCAACATTCCCCCCGCCTGACGACAAAAGCCCCTCCCCTGCTGGACAAATCCAAGCCCCCATCGCGCCGATAACACCATTGATTCCTACGGCACAATCCTCACTCAAGGCGCCCTCACAGCTGCTGCTGCCGCCCTCCGTGTTTGCCGACCCTCCCGCAACGCAACACCTCTTCACGTCCCTTAGTGACGTCATCGCTAAAAGCATCAGCCAGAAGTTCCAGCAACCCCTAGATAGGCCACACCACCAGCCCAGTGAACTTATGTATGCGCGAGGCCCTGATCGACACGTCTCTGTCATCAAAACTCCGCCTGATAATCAACGCTACCCCGCGCCCGGCAACTCTAAGGCCACTCCGAACAACAACGGTCAGCCGGCCACCGGCGGCAAGGGCACTCGGCCCAAGCGAGGCAAGTACCGCAACTACGACCGTGACAGTCTCGTGGAGGCGGTGAAGGCCGTGCAGCGCGGCGAGATGTCGGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTCAAGGAGCGCCACCTCATGCGGCCGCGGAAGCGCGAGCCCAAGCCGCCGCAGGACGCCAAACCGCAGCCACCAAAGCCGCCGCCTCCTAAACCGCCGACGAAACCGTTCTCTAACGGACTCAACGGGCCGGAGGGACCGGGCTATCCTCCCGGCTATCCCTTCTGGCCGGGCAGTGGATTCCCACCGCCGCCCGCTCCCGACTTGTACGCCTCGCACATGATGCGACGATTGCGCGAAGAAGCGCCTCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCCGGTCCAGCCTGGAGCGACCTGCGCTGATGCAGCGACTAGCGGCACCCCCGGGCGGCGAGCCGGTGCGCCGGCCGCCGACGTCGGACGGCGACGAGCCGCCCGCGCGCCGGCCGCGCCTCGACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCcgacgccgccgcccgcgccgccggccgagccgccgccgccgccggccgcgccgccggACCGCGCCTAG
- Protein Sequence
- MSRRNVDNNITTALWLAETTLCCEREYYDTKHGTTMVVTRLPEVGEKAPASSSPNLTEQPLDLSAKSTSSTSGTPPPDAKLLDNRLKRAVLEGASNSSGRRTYTEDELQSAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGSAVDHADSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQIQAPIAPITPLIPTAQSSLKAPSQLLLPPSVFADPPATQHLFTSLSDVIAKSISQKFQQPLDRPHHQPSELMYARGPDRHVSVIKTPPDNQRYPAPGNSKATPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDAKPQPPKPPPPKPPTKPFSNGLNGPEGPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALMQRLAAPPGGEPVRRPPTSDGDEPPARRPRLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_01342136;
- 80% Identity
- -