Acen049849.1
Basic Information
- Insect
- Atethmia centrago
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905333075.2
- Location
- HG995389.1:22356811-22416777[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-13 2.5e-10 41.7 0.0 1 37 255 292 255 296 0.92 2 2 1.1e-17 3.2e-15 57.3 0.0 1 43 465 508 465 510 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGAAGAAAATGGAAACTATATCAGGACGCATTAATTCCAAAACGGGGGGAGGCAGAATTATCGAGCGACGAGGAATCAGTCCAGACCGACCCTCCACCAGCCCTAAAGATCAAGACTATCGAGCAAATAAACGAGGACGAAGCAAAGGACGAAAGAGTGGAAGAGAAGGTGCCTCGAAGGCCGGAGACGATTCTAGAGTCGCTGATCAAAAGGCCTGCGACCCAACCCAAGCTGGAAGTCGCCGAGGAACCAGCAGATTGGAAGCCGCAGGACAAATGCTACTTCTGTACGGATGGTGAGCCTGGCGGGGGCGAGAACAGGCCGGGCGGTGCAATGAGTCCCGCATCGGAGTCGGACAGCAGTTCGGTGTCGGGGGCGAAGAGCCCAGCGTCAGCGCCGCCGCTGCTACAACACCTGCTTCAACTGCAAGCACAGAACCCGCAGACTATAGCACAGTTTCAGCAGATGCTGACAGCGCTGGCTGCGCTCGGCAGCGGGTTGGTGCCACCGCCGCCGATGTCGCAACCTTGGATGATGCAGCGGCTGGTGCAGAGGCAGACCGATAGGCTACCGGAGGTGGGCGAGAAGGCGCCGGCGTCTTCGTCCCCCAATCTCGCGGAGCAGCCGCTGGACCTCAGTGCCAAGTCTACCTCCAGCACCAGTGGAACTCCACCTCCTGACTCCAAGCATTTGGATAACAGATTGAAGCGTGCCGTTCTAGAGGGCGCCAGCAACAGTTCTGGTCGTCGCGCGTACACTGAAGAGGAGCTACAGTCAGCTGTCCGTGACATCCAGTCGGGTCGGCTGGGCACCCGCCGAGCCGCCCTCATCTACGGCATCCCGCGCTCCACGCTACGCAACAAACTCAACAAGTTCGGCACCGTCGTCGACCACGCCGACTCCGACAATGACAGCGATGCCGACCGCGCCGACTCGCCCCCTTCCGTCATCCTCAAAATACCTACATTCCCCCCGCCAGACGACAAAAGCCCATCTCCCGCTGGGCCACACCAAGCCTCCATTGCGCCAATAACTCCGATGCTCCCCACGGGACAAGCCTCGCTCAAGGGACCCTCACAGCTGCTACTCCCGCCTTCCGTGTTCGCCGACCCACCCTCAACACAACATCTCTTCACGTCCCTCAGTGACGTAATCGCTAAAAGTATCAGCCAGAAGTTCCAGCAACCCTTAGATAGGCCGCACCACCAACCCAGTGAACTTATGTACGCACGAGGCCCTGACCGACACGTGTCTGTCATCAAGACTCCGCCTGATAATCAGCGGTACCCTGCGCCTGGTAACTCTAAGCAAATGCCCAACAACAACGGCCAGCCGGCCGCAGGCGGCAAGGGCACGCGGCCCAAGCGTGGCAAGTACCGGAACTACGACCGCGACAGTCTCGTTGAGGCGGTAAAAGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCTGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTCAAGGAGCGCCACCTCATGCGACCGCGGAAACGCGAGcccaagccgccgcaggacGCCAACAAACCGCAGCCACCAAAGCCGCCGCTACCGAAACCGCCGACGAAGCCGTTCTCCAACGGACTCAACGGGCCGGAAGCGCCGGGGTATCCTCCCGGCTACCCGTTCTGGCCAGGAAGTGGGTTCCCACCGCCGCCCGCTCCCGACTTGTACGCCTCGCACATGATGCGACGACTGCGCGAAGAAGCGCCGCCGCCCGCGAACGGCTCGTTCCTAGAGGGCATCATCAGGTCGAGCCTGGAGCGGCCCGCGCTGCTGCAGCGGCTGGCGGCGCCGGCGGGCGGCgaggcgcggcgcgcggcggcgcccgACGCCGACGAGCCGCcggcgcggcgcgcgcgccTGGGCAGCTCGGACCAGGCGCTGGCGGCCGACATGCGCGAGGCGGTGCAGCGCCTGCGCGCCGACAAGCTGCGGCCGCGCTCGGGCACGCCcacgccgccgcccgcgccgccggccgagccgccgccgccgccggccgCGCCGCCGGACCGCGCCTAG
- Protein Sequence
- MGRRKWKLYQDALIPKRGEAELSSDEESVQTDPPPALKIKTIEQINEDEAKDERVEEKVPRRPETILESLIKRPATQPKLEVAEEPADWKPQDKCYFCTDGEPGGGENRPGGAMSPASESDSSSVSGAKSPASAPPLLQHLLQLQAQNPQTIAQFQQMLTALAALGSGLVPPPPMSQPWMMQRLVQRQTDRLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVLEGASNSSGRRAYTEEELQSAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGTVVDHADSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGPHQASIAPITPMLPTGQASLKGPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQPSELMYARGPDRHVSVIKTPPDNQRYPAPGNSKQMPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDANKPQPPKPPLPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPAGGEARRAAAPDADEPPARRARLGSSDQALAADMREAVQRLRADKLRPRSGTPTPPPAPPAEPPPPPAAPPDRA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_01342136;
- 80% Identity
- -