Tni004863.1
Basic Information
- Insect
- Trichoplusia ni
- Gene Symbol
- Mblk-1
- Assembly
- GCA_003590095.1
- Location
- NC:3155586-3328411[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-13 1.4e-10 40.5 0.0 1 38 292 330 292 335 0.91 2 2 5.7e-19 7.7e-16 57.3 0.0 1 43 502 545 502 547 0.95
Sequence Information
- Coding Sequence
- ATGGCGGAGTGCTCGTTCGCGCGGTGTCAACAGGAACGTCGCACCATACGCAAGGAGCTGCAACGCTGGACTAAGAACATGGTCTACATACTGGGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATATCAGGACGCATTAATTCCAAAACGGGGGGAGGGCGAAAGGTCGAGCGACGAGGAATCAGTGCAGACGGACCCCCCACCGGCCCTCAAGATAAAGACCATCGAGCAGATCAACGAGGACGAAGGGAAAGAGGAACGGAGAGAGGAGGAGCGGAGGCGGCCGGAGACCATCCTGGAGTCGTTGATCAAGAGGCCGGCGACGCAGCCGAAGGTGGAGGTGCAGGAGGAGCCGGCGGACTGGAAGCCGCAGGACAAGTGCTACTTCTGTACGGATGGGGAGCCGGGCGGAGAGGCTAGGCCGGGAGCTGCTGCTAGTCCTGCTTCGGAGTCGGACAGCAGCTCGGTGTCCGGGGCAAAGAGCCCGGCGTCAGCGCCGCCGCTGCTCCAGCACCTGCTGCAACTGCAAGCTCAGAACCCGCAGACCTTAGCACAGTTTCAGCAGATGCTGAccgcgctggccgcgctggGCAGCGGGCTggtgccgccgccgccgctctcACAACCCTGGATGATGCAGAGGCTCGTGCACCGGCAGACCGACAGACTCCCGGAGGTATGCGAGAAGCCGGCGTCCTCATCCCCGAGCCTCGCCGAACAGCCTCTGGACCTGAGCGCCAAGTCCACCTCCAGCACCAGTGGGACCCCACCGCCAGATGCCAAACTCTTGGATAACAGATTGAAGCGTGGCGCTGTAGACAACGCGAGCAACAGCTCCGGGCGGCGCGCCTACACTGAGGACGAGCTGCAGTCGGCCGTGCGCGACATCCAGGCGGGCCGGCTGggcacgcgccgcgccgccatGATCTACGGCATCCCGCGCTCCACGCTGCGGAACAAGCTCAACAAGTTCGGCACCGCCGTCGACCATGCAGACTCGGAGAACGACAGCGACACCGAGCGCCCCGAGTCGCCCCCATCCGTTATCCTCAAGATACCGACCTTCCCCCCGCCAGACGACAAGAGCCCCTCCCCCGCCGGACAGATCCAAGCGCCGATCACACCCATCACACCGATGCTGCCCACACCGCAGCCATCGCTCTCCGCGCCCTCACAGCTGCTGCTCCCGCCCTCTGTGTTCGCTGACCCACCATCCACACAACATCTCTTCACATCCATCAGTGATGTCATTGCTAAGAGCATCAGCCAGAAGTTCCAGCAACCCTTGGACAGACCTCATCATCAGCCAAATGAACTAATGTATGCCCGAGGCCCCGACAGACATGTGTCCGTGATCAAAACCCCGCCAGACAATCAGCGCTATCCCGCCCCCGGCAATTCTAAAGCCGTTCCGAACAACAATGGGCAGCCAGCCACAGGCGGCAAAGGCACGCGGCCCAAGCGCGGCAAGTACAGGAACTACGACCGTGACAGCCTGGTGGAGGCGGTGAAGGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCTTACTACGGGGTGCCGCACTCCACGCTGGAGTACAAGGTCAAGGAGCGCCATCTCATGCGGCCGCGGAAGCGCGAGCCCAAGCCGCCGCAGGACGCCAAGCCACAGCCACCGAAGCCGCCACCACCCAAGCCACCGACAAAGCCGTTCTCGAACGGCATGAACGGGCCAGAGGCCCCCGGCTATCCCCCGGGGTACCCGTTCTGGCCCGGCAGCGGCTTCCCGCCACCCGCGCCCGACCTGTACGCCTCGCACATGATGCGGCGCCTGCGGGAGGAGGCCCCGCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCCGCTCGTCGCTGGAGCGGCCGGCGCTGCTGCAGCGGCTGGCGGCACCCGCGGGTGAACTGCGGCGCGAGGCCGGGGACGAGCCGCCCGCGCGCCGGCCGCGGCTGGACAGCTCGGACCAGGCGCTGGCGGCCGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGcccacgccgccgcccgcgccgcccgccgagccgccgccgccgcccgccgcgccgcccgaccGCGCCTAG
- Protein Sequence
- MAECSFARCQQERRTIRKELQRWTKNMVYILGLERVAEELMGRRKWKLYQDALIPKRGEGERSSDEESVQTDPPPALKIKTIEQINEDEGKEERREEERRRPETILESLIKRPATQPKVEVQEEPADWKPQDKCYFCTDGEPGGEARPGAAASPASESDSSSVSGAKSPASAPPLLQHLLQLQAQNPQTLAQFQQMLTALAALGSGLVPPPPLSQPWMMQRLVHRQTDRLPEVCEKPASSSPSLAEQPLDLSAKSTSSTSGTPPPDAKLLDNRLKRGAVDNASNSSGRRAYTEDELQSAVRDIQAGRLGTRRAAMIYGIPRSTLRNKLNKFGTAVDHADSENDSDTERPESPPSVILKIPTFPPPDDKSPSPAGQIQAPITPITPMLPTPQPSLSAPSQLLLPPSVFADPPSTQHLFTSISDVIAKSISQKFQQPLDRPHHQPNELMYARGPDRHVSVIKTPPDNQRYPAPGNSKAVPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDAKPQPPKPPPPKPPTKPFSNGMNGPEAPGYPPGYPFWPGSGFPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPAGELRREAGDEPPARRPRLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01361508; iTF_01363020; iTF_00363944; iTF_01093954; iTF_00726213; iTF_01439813; iTF_00237384; iTF_01230447; iTF_01180248;
- 90% Identity
- iTF_01342136;
- 80% Identity
- -