Atri002196.2
Basic Information
- Insect
- Abrostola triplasia
- Gene Symbol
- Mblk-1
- Assembly
- GCA_946251925.1
- Location
- CAMIUJ010000007.1:2251427-2275222[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-13 1.8e-10 40.5 0.0 1 36 150 186 150 192 0.92 2 2 1.1e-18 7.9e-16 57.6 0.0 1 43 360 403 360 405 0.95
Sequence Information
- Coding Sequence
- ATGAGTCCCGCATCGGAGTCAGACAGCAGTTCGGTGTCGGGAGCCAAGAGCCCGGCGTCAGCGCCGCCGCTGCTGCAGCATCTGCTACAACTGCAAGCACAGAACCCGCAGACGTTAGCACAGGGTTACACGGACATGTGTGTGCAGTTTCAGCAGATGCTGACAGCCCTGGCGGCGCTGGGCAGTGGGTTGGTGCCACCGCCTCCACTCTCGCAGCCCTGGATGATGCAGCGGCTGGTGCATAGGCAGACCGACAGGCTCCCGGAGGTGGGTGAGAAGGCGCCGGCGTCATCGTCTCCCAACCTGGCCGAGCAGCCTCTGGACCTCAGCGCCAAGTCCACCTCCAGCACCAGCGGGACTCCACCTCCTGATGCCAAGCTCTTGGATAACAGATTGAAGCGTGCGGTCCTTGAGAGCGCCAGCAACAGTTCAGGCCGGCGCGCCTACACAGACGACGAGCTGCATTCGGCCGTGCGCGACATCCAGTCCGGCCGGCTGGGCACCCGGCGCGCTGCCATGATCTACGGCATCCCGCGCTCCACGCTGCGCAACAAACTTAACAAATTTGGCTCCGCCGTCGACCACGCTGACTCCGAAATCGACAGCGATGCCGAGCGCCCCGACTCGCCCCCTTCAGTCATCCTCAAAATACCCACATTCCCCCCGCCAGACGACAAGAGCCCCTCCCCCGCCGGGCAAATCCAAGCCCCCATTACGCCCATCACCCCGATGCTCCCGACGCCGCAGACCTCCCTGAGCGCACCCTCACAGCTGCTGCTGCCACCCTCCGTGTTCGCCGACCCGCCTTCGACTCAACATCTGTTCACATCTATCAGTGACGTCATCGCTAAAAGCATCAGCCAGAAGTTCCAGCAGCCTCTGGACAGGCCCCACCACCAGCCAAACGAACTGTTATATGCGCGAGGACCGGACCGACACGTGTCCGTCATCAAAACCCCGCCAGATAACCAACGCTATCCCGCACCTGGCAACTCTAAAGCCACTCCCAACAACAACGGCCAGCCGGCCACCGGCGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACAGGAACTACGACCGTGACAGCCTCGTCGAGGCCGTGAAGGCCGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCGTACTACGGCGTGCCGCACTCCACGCTGGAATACAAGGTCAAGGAGCGCCACCTCATGCGGCCGCGGAAACGCGAGCCCAAGCCGCCGCAGGACGCCAAGCCGCAGCCGCCCAAGCCGCCGCCGCCCAAACCACCGACGAAGCCCTTCTCGAACGGACTCAACGGACCGGAGGCTCCGGGCTATCCTCCGGGGTATCCGTTCTGGCCCGGCAGCGGGTTCCCGCCGCCGCCCACCCCCGACCTGTACGCTTCGCACATGATGCGGCGCCTGCGCGAAGAGGCACCGCCGCCTGCCAACGGCTCGTTCCTGGAGGGCATCATCCGGTCCAGCCTGGAGCGGCCCGCGCTGCTGCAGCGGCTGGCGGCGCCCGCGGGCGGCGAGGCGCTGCGCCGACCGCCCGCGGCCGACGGCGACGAGCCCCCCGCGCGCCGCCCGCGCCTCGACAGCTCAGACCAGGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACACCCACGCCGCCGCCCGCGCCGCCGGCCGAGCCGCCGCCGCCGCCCGCCGCGCCGCCCGACCGCGCCTAG
- Protein Sequence
- MSPASESDSSSVSGAKSPASAPPLLQHLLQLQAQNPQTLAQGYTDMCVQFQQMLTALAALGSGLVPPPPLSQPWMMQRLVHRQTDRLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDAKLLDNRLKRAVLESASNSSGRRAYTDDELHSAVRDIQSGRLGTRRAAMIYGIPRSTLRNKLNKFGSAVDHADSEIDSDAERPDSPPSVILKIPTFPPPDDKSPSPAGQIQAPITPITPMLPTPQTSLSAPSQLLLPPSVFADPPSTQHLFTSISDVIAKSISQKFQQPLDRPHHQPNELLYARGPDRHVSVIKTPPDNQRYPAPGNSKATPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDAKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPAGGEALRRPPAADGDEPPARRPRLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_01342136;
- 80% Identity
- -