Apul027417.1
Basic Information
- Insect
- Autographa pulchrina
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_905475315.1
- Location
- FR997784.1:2736887-2743683[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-13 6.5e-11 42.5 0.0 1 38 83 121 83 126 0.91 2 2 2.5e-18 1e-15 57.9 0.0 1 43 293 336 293 338 0.95
Sequence Information
- Coding Sequence
- ATGCTGTGGAAACCATATGATATGGGCTTCAGTTATGATATGTTTTTCCATTTGTGGAGACTTCCGGAGGTGTGTGAGAAGCCGGCGTCCTCGTCCCCGAGCCTGGCGGAACAGCCCCTGGACCTCAGCGCCAAGTCCACCTCCAGCACCAGCGGCACACCACCACCGGACGCCAAACTCTTGGATAACAGATTGAAGCGCGGAGCACTAGACAACGCGAGCAACAGTTCGGGGCGGCGCGCCTACACGGACGAGGAGCTACAGTCGGCCGTGCGCGACATCCAGTCGGGCCGGCTGGGCACGCGCCGTGCCGCTATGATCTACGGCATCCCGCGCTCCACGCTGCGCAACAAGCTCAACAAGTTCGGCACCGCCCTCGACCACGCCGACTCCGACAATGACAGTGACAACGAGCGACCCGACTCGCCCCCCTCCGTCATCCTCAAGATACCCACGTTCCCCCCGCCCGATGACAAGAGCCCCTCGCCCGCTGGACACATCCAGGCGCCCATCACGCCCATCACACCCATGCTGCCCACGCCGCAAGGCTCGCTCGGCGCGCCCTCGCAGCTGCTGCTCCCACCTTCAGTGTTCGCCGACCCACCATCTACTCAACATCTCTTCACATCCATCAGTGATGTCATCGCTAAGAGCATCAGCCAGAAATTCCAGCAGCCTATGGACAGACCCCATCACCAGCCAAACGAACTTCTTTATGCACGAGGCCCCGATAGACACGTGTCAGTAATCAAAACCCCGCCAGACAACCAGCGCTACCCCGCACCCGGCAACTCTAAAGCCGCTCCGAACAACAACGGGCAGCCGGCCACCGGCGGCAAGGGCACGCGGCCAAAGCGCGGCAAGTACAGGAACTACGACCGGGACAGCCTCGTGGAGGCGGTGAAGGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTGGAGTACAAGGTCAAGGAGCGCCACCTCATGCGACCGCGGAAGCGCGAGCCCAAGCCGCCGCAGGACGTCAAGCCGCAGCCACCGAAGCCGCCGCCGCCGAAACCACCGACAAAACCGTTCTCGAACGGTATGAATGGGCCAGAAGCCCCGGGCTACCCTCCTGGGTACCCGTTCTGGCCCGGCTCTGGCTTCCCGCCGCCGCCCGCGCCCGACCTGTACGCCTCGCACATGATGCGGCGTCTGCGCGAGGAGGCCCCGCCGCCCGCCAACGGCTCTTTCCTGGAGGGCATCATCCGCTCGAGCCTAGAGCGGCCGGCGCTGCTGCAGCGGCTGGCGGCGCCTGCGGGCGAGCTGCGGCGCGACGGCGACGAGCCGCCCGCGCGCCGGCCGCGGCTGGACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCCACGCCGCCGCCCGCGCCGCCCGCCGAGCCGCCGCCGCCGCCCGCCGCGCCGCCCGACCGCGCCTAG
- Protein Sequence
- MLWKPYDMGFSYDMFFHLWRLPEVCEKPASSSPSLAEQPLDLSAKSTSSTSGTPPPDAKLLDNRLKRGALDNASNSSGRRAYTDEELQSAVRDIQSGRLGTRRAAMIYGIPRSTLRNKLNKFGTALDHADSDNDSDNERPDSPPSVILKIPTFPPPDDKSPSPAGHIQAPITPITPMLPTPQGSLGAPSQLLLPPSVFADPPSTQHLFTSISDVIAKSISQKFQQPMDRPHHQPNELLYARGPDRHVSVIKTPPDNQRYPAPGNSKAAPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVKPQPPKPPPPKPPTKPFSNGMNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPAGELRRDGDEPPARRPRLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_01342136;
- 80% Identity
- -