Cvac017107.1
Basic Information
- Insect
- Conistra vaccinii
- Gene Symbol
- Mblk-1
- Assembly
- GCA_948150665.1
- Location
- OX411337.1:4146292-4205626[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-14 3.2e-11 43.3 0.0 1 37 308 345 308 349 0.92 2 2 1.8e-18 1.4e-15 57.2 0.0 1 43 518 561 518 563 0.95
Sequence Information
- Coding Sequence
- ATGGCTAGAACAATTGAAAGCACATTAGATGAAGACTGGAAGTCTTACAAAGTAGTGCTTGGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATATCAGGACGCATTAATTCCAAAACGGGGGGAGGCAGAACTATCGAGCGACGAGGAATCAGTCCAGGCCGACCCTCCTCCAGCCCTAAAGATCAAGACTATAGAGCAAATAAACGAGGACGAAGCAAAGGACGAAAGACTGGAAGAGAAGGTGCCTCGAAGGCCGGAGACGATCCTAGAGTCGCTGATCAAAAGGCCTGCGACACAACCCAAGCTGGAGGTTGCCGAGGAACCAGCAGATTGGAAGCCGCAGGACAAATGCTACTTCTGTACGGATGGTGAGCCTGGCGGGGGCGAGAACAGGCCGGGCGGTGCTATGAGTCCCGCATCGGAGTCGGACAGCAGTTCGGTGTCGGGGGCGAAGAGCCCGGCGTCGGCGCCGCCGCTGCTGCAGCACCTGCTTCAACTGCAGGCGCAGAACCCGCAGACTATAGCGCAGCTTCTCCCATATTTTCTGTATGTTAATCCTAAGCTATGTTACAAGCAGGGGTACACAGACATGTGTGTGCAGTTTCAGCAGATGCTGACGGCGCTGGCTGCGCTCGGCAGCGGGTTGGTGCCGCCGCCGCCGCTGTCGCAACCCTGGATGATGCAGCGGCTGGTGCAGAGGCAGACCGATAGGCTAGCGGAGGTGGGCGAGAAGGCGCCGGCGTCTTCGTCCCCCAACCTCGCGGAACAGCCGCTGGACCTCAGCGCCAAGTCTACCTCCAGCACCAGTGGAACTCCACCTCCTGACTCCAAGCATTTGGATAATAGATTGAAGCGAGCGGTTCTAGAGAGCGCCAGTAACAGTTCTGGTCGTCGCACATATACTGATGAGGAACTCCAGGCAGCCGTCCGTGACATCCAGTCGGGCCGGCTGGGCACCCGCCGAGCCGCCCTCATCTACGGCATCCCACGCTCCACGCTGCGCAACAAACTCAACAAGTTTGGCACCCTCGCCGACCACGCTGACTCCGACAACGACAGCGATGCCGACCGCGCCGACTCGCCCCCCTCCGTCATCCTAAAAATACCCACATTCCCCCCGCCAGACGACAAAAGCCCATCCCCCGCTGGACAACACCAAGCTCCCATCGCGCCAATAACACCGATGCACCCCTCGGGTCAAGCCTCACTCAAGGGACCCTCACAACTGCTGCTCCCGCCCTCCGTGTTCGCCGACCCTCCCTCAACACAACACCTCTTTACGTCCCTCAGTGACGTTATCGCTAAAAGCATCAGCCAGAAGTTCCAGCAACCCATAGATAGGCCGCACCACCAGCCCAGTGAACTGATGTACGCGCGAGGCCCTGACCGACACGTGTCTGTCATCAAGACTCCGCCTGATAACCAGCGCTACCCCACACCCGGCAACTCTAAGCAGATGCCCAACAACAACGGCCAGCCGGCCGTCGGCGGCAAGGGCACGCGGCCCAAACGTGGCAAGTACCGGAACTACGACCGCGACAGTCTCGTGGAGGCGGTGAAAGCCGTTCAGCGCGGCGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTCAAGGAGCGCCACCTCATGCGGCCGCGGAAGCGGGAGCCCAAGCCACCGCAGGACGCCAACAAACCGCAGCCACCAAAGCCGCCGCCGCCGAAGCCGCCGACGAAGCCGTTCTCCAACGGACTCAACGGGCCAGAAGCCCAGGGCTATCCTCCCGGCTACCCGTTCTGGCCTGGCAGTGGGTTCCCACCGCCGCCCGCTCCCGACTTGTACGCCTCGCACATGATGCGACGACTGCGCGAAGAAGCGCCCCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCAGGTCGAGCCTGGAGCGGCCCGCGCTGCTGCAGCGGCTGGCGGCGCCGCCGGGCGGAGAGGCGCGCCGGCCGCCGCCGCCGGACGGCGACGAGCCGCCGGCGCGCCGCGCGCGGCTGGACAGCTCGGACCAGGCACTGGCGGCGGAGATGCGTGAGGCAGTGCAGCGACTGCGCGCTGACAAACTGCGGCCACGCAACGGCACGCCCACGCCGCCGCCCGCGCCGCCGGCCGAGCCGCCGCCGCCGCCGGCCGCGCCGCCGGACCGCGCCTAG
- Protein Sequence
- MARTIESTLDEDWKSYKVVLGLERVAEELMGRRKWKLYQDALIPKRGEAELSSDEESVQADPPPALKIKTIEQINEDEAKDERLEEKVPRRPETILESLIKRPATQPKLEVAEEPADWKPQDKCYFCTDGEPGGGENRPGGAMSPASESDSSSVSGAKSPASAPPLLQHLLQLQAQNPQTIAQLLPYFLYVNPKLCYKQGYTDMCVQFQQMLTALAALGSGLVPPPPLSQPWMMQRLVQRQTDRLAEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVLESASNSSGRRTYTDEELQAAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGTLADHADSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQHQAPIAPITPMHPSGQASLKGPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPIDRPHHQPSELMYARGPDRHVSVIKTPPDNQRYPTPGNSKQMPNNNGQPAVGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDANKPQPPKPPPPKPPTKPFSNGLNGPEAQGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPPGGEARRPPPPDGDEPPARRARLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01487639;
- 90% Identity
- iTF_01342136;
- 80% Identity
- -