Ppal017309.1
Basic Information
- Insect
- Pseudomyrmex pallidus
- Gene Symbol
- Kdm5a
- Assembly
- GCA_014825455.1
- Location
- QVNV01008426.1:5726-19578[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7e-25 8.4e-22 77.7 0.0 2 89 84 167 83 167 0.94 2 3 7 2.2e+04 -3.9 0.1 49 78 796 823 794 828 0.57 3 3 0.8 2.5e+03 -0.8 0.0 9 41 930 961 926 993 0.73
Sequence Information
- Coding Sequence
- ATGGAACGCGCGGAGAACGACTTTGACTTCACGGTGCCGCCAGAGGCACCGGTGTTCGAGCCCACTAACGAGGAGTTTCTCGATCCTCTGGCTTACATCGCGAAGATACGCCCGATCGCCGAGCAGTCCGGCATCTGCAAGATCAAACCACCGCCTAACTGGCAACCGCCTTTCGCTGTGGACGTGGACAAATTCAAATTCGTTCCCCGAATACAACGGCTAAACGAATTAGAAGCTAAAACGAGGATTAAGCTTAATTTTTTAGATCAAATTGCAAAATTTTGGGAACTGCAAGGTTCATCCTTGAAGATTCCTCTTGTGGAACGGAAGGCTCTGGATTTGTATTCGTTGCATAAAATAGTTACCGAGGAAGGCGGTATAGATACGGTAACGAAGGAAAGAAGATGGGCAAAAATCGCCAACAAATTGGGTTACCCGTCCGGACGAAGCGTGGGCAGCATATTGAAAGGACACTACGAGAGAATTTTATATCCTTTTGACGTCTTCAGACAAGGAAAAGCATTGTCAGATATTAAAATTGAACCAGAATCCGAAGAAAAAAATGAGAAAAAAGATCGCGATTACAAACCTCACGGTATAATATCACGACAACAGATCAAACCTCCAAACGAGAAATTCTCACGACGATCCAAGCGATTTTCCGGACAGGAAGAGAAGCAGGATATGTCGATTAAAGACGAGTGCAAGGAGGAATGTGATTCGGACAACGAGTGCAAGGAGAAGATAAAAATTAAGCATTTTAATGACACGGATAAGAGTAAGGAGCTCAAGAAGTTACAGTTTTATGGACCAGGTCCCAAAATGGCCGGATTTAATACCAAAGAGGCAAAGAAATCCAACAAAACGCGTGGTTTAAAGCTTGTTTACGAATTCGATCCATTGGCGAAATATATTTGTCACAACTGTAGTAGAGGCGACAATGAGGAGAACATGTTACTCTGCGACGGTTGCGACGACAGTTATCACACTTTTTGTCTTATGCCACCACTGACGGAAATACCGAAGGGCGACTGGCGGTGTCCTAAGTGCGTCGCAGAAGAGGTCTCGAAGCCAATGGAGGCGTTCGGCTTCGAACAAGCGCAGAGAGAGTATACATTGCAGCAATTCGGAGAAATGGCTGATCAATTCAAAAGCGATTATTTCAATATGCCAGTACATATGGTTCCGACGTCTTTGGTGGAAAAAGAATTTTGGCGAATAGTATCGTCCATCGACGAAGACGTGACTGTCGAATATGGCGCCGATTTGCATACAATGGATCACGGTTCTGGATTTCCGACAAAAACCAGCGTTAATTTATTTACCTGCGATCAAGAGTACGCCGAATCGTCGTGGAATCTGAATAATTTGCCGATATTGCGCGGCAGCGTTCTAGGTCACATTAACGCCGATATCAGCGGCATGAAAGTTCCCTGGATGTACGTCGGTATGTGCTTTGCAACGTTCTGCTGGCACAACGAAGATCACTGGAGCTATTCCATCAATTATCTGCACTGGGGCGAGCCGAAGACGTGGTACGGAGTCCCGGGCTCTCAGGCGGAACGTTTCGAACACTCCATGAAATCCGCCGCGCCAGAACTATTTCACAGTCAGCCTGATTTGTTGCATCAACTTGTTACTATCATGAATCCTAATATATTAACGAATGAAGGCGTACCAGTGTTCAGAACTGACCAGCACGCAGGCGAGTTTGTTGTAACATTTCCGAGAGCGTATCACGCAGGTTTCAATCAGGGTTATAATTTTGCGGAAGCTGTCAATTTCGCACCTGCGGATTGGTTAAAAATCGGACGAGAGTGCATCACGCATTATTCAAATTTGAGAAGATTCTGTGTGTTTTCTCATGATGAGCTAGTTTGTAAAATGTCTTTGGATCCAAACCTATTAGACATTGGAGTAGCAACAGCTACTTATTATGACATGCTACAGATGGTAGAGGATGAGAAAAAACTAAGGAAAAATCTGCTGGATTGGGGTGTGACAAAGGCGGTACGCGAGTACTTCGAGCTTCTACCGGACGATGAGAGACAGTGCGAAGCGTGTAAGACCACCTGTTTCCTCAGTGCGGTTACATGTTCGTGTCACAACTCACAATTGGTTTGTCTAAGACACTTTTCTGACTTGTGCGACTGTCCACCGGAAAAGCATACTCTACGATACCGATATACGTTGGATGAATTGCCCACCATGCTACAAAAGTTGAAACTCAAGTCTGAGTCGTTTGAGTCGTGGGTGACTAAAGTGAAGGAAGCGATGGACCCTAAAAGTGATAAAATTGAATTGAGCGAATTGAAAGAATTGCTAAATGAGGCAGAAAACAAAAAGTTTCCTGACAGTGAATTGCTCACAGCTCTGACTACTGCTGTGCAGGATGCTGAAAAGTGTGCCAGTGTTGCGCAACAGCTCTTGAATAACAAGCAACGTACCAGGACTAGGCATACAGTTGATACCAAGTACAAACTGACAGTTGAAGAGTTAACGCTTTTCTACAAGGAAATAACCAATCTATGCTGTGAGCTCAAGGAATCGGACGGGGTAAAGTTTATACTCGATCAAGTATTACAGTTCCAAAAGGATGCGGAAGAATTGGATTCCAAGGAAGAAAACTGTGACATTGAGAAACTTGAAAAATGTATCGACTTTGGCGATTCTATTTGCATTGAACTTCCTGAACTAGTACGATTGAAACAGAGATTAACGCAGATACAGTGGCTAGAAGAAGTGAAGTCTCTTCAGGAGGATCCTAAATCCGTGAGTCGGGAAGAATTAGCGAAATTAATCGAAAAAAGCATAGCAATACCACCTCATTTTAGTATCGAGAACACTCGGTTGAAATTACACGCTTTAACAAAGGAGATTGATGAATGGGAAGAAAAGACTACGGCGTTCTTACAAAGCAAGTCTAAACACACTATCGCGGAAGCGGAGGAGTTTATTAAAGAGGCAAATAAAGTTCAGGCGTATCTACCGAGTCTGGACAATCTCGAGGATGTGTTGGGCAAAGCGAAAAACTGGACAAATATGGTGGAAGAAGCAACAAAAGAAAACAATTTACCTTTTTACGATACTTTGGATGATATGATAAGAAAGGGAAAGAACATCCCGTTGCAGTTGGACGCCCTCGCACAACTGGAAACAACTCTGTCGCAGGCAAAAGCGTGGAAAGAGAAAACGGCAAAGACATTCCTTAGAAAAAACTCGCGATACACGTTGCTGGAAGTGCTGTCGCCGCGAATCGGCGTTGGCGTGCAAGCGATGAAGACCAAAAAGAACAACAAAGGCGATGAGAGCGTGGGAGCCGTTTATGTCTGTGATACGAAGTTGGACGAGTCCAGTGATCAGGCAGACGTGGTGGCTGCCTTTAGAGTGGCGCAGCAGCGCGAGATGGATGCGATGAGAAGTCTGAGAGAGAGAAACCTGTTGAAAATGAAAGCGGAGGAAGATTCGAAATACTGTCATTGTAAGCAACCGAGATACGGCATTATGTTTCAATGCGAGCTCTGCAAAGACTGGTTCCACACAAACTGTGTGCCCTTGTCTAAAATGTTCAACAAAGGTAAGTCACCAGCGCCGAAGGACATGAGATTTCTTTGTCAGAATTGTCTGCGTTCGCGTCGACCTCGCCTGGAAACTATACTAGCCCTCTTACTGAATCTCCATGAAATCCCGATCCGATTGCCGGAAGGCATAGCATTGCAATGCTTAACAGAACGAGCGATGAATTGGCAGGCTCGAGTGAAGACATTATTTGAAACCCAAGAGGTAGACACGATAAACAAGAAACTCAACATGATGTCGCAAAAATTGGTAGAAGCGGCGGCAAGGGAAAAGACGGAAAAAATCATCAGCAGTGAGTTGAAGAAAGTAGCGAATAATTCCGAATTGCAACAGCGAGTGCAAAACATCGCGTCCGCCAGCGGAGCGCATTCGGATGATAGCGCGCTCAGTGCTGCCGATGAAGACGAAGATATCATTGATGCTGAACCGTCATGTAGTACTTTCAACAGTAACGAGCATGCATATTCGTACATCTCGAAGGTTCGGCGGAAAACTCAGTCGAGTGACGGCGAACCGTTGAGTATGTTATCGCAAAGCGCGAGATCGCGTTTAGAGGAATTGATGATGGAGGGCGATCTACTAGAGATCGAACTGGAAGAGACGCAAAAGATCTGGCGTATCTTGAGTTACATGAACAACAATCAGAATACCATGCGGAAATACAAATCGCTGGAAGAAATTCAGACGAATGCCACTCAAGAAGTGAAGGACGTCAAGAAACGAGGTAGGAAGAGAAGGTCGGAGGAGGTGGAGTTGTTGAAGAAACCTGTGAAGAAGATCGAAGAAAAGAACACTGTGATGAAGCGCAGCAAGAGCAATCCGGCCGCCAAGGAGAAGAGGCAGAGCAATTCGCCTATTCCTGTTAAACGCGGACCTCGAAAGATAAAACGTAGGAGCGAGGGTGAGGAAACACCTAAGAAACGAGGTGGTAATCGCACGAAGAAGACCAAGCAAGAGAGCTCGGATGAAGAAGACGACTGCGCGGCGGAAAACTGCTTACGGCCTAGTGGTAAAGAAGTTGATTGGGTTCAGTGCGACGGTGGCTGCGAAGGTTGGTTCCATATGCACTGTGTCGGATTGGATCGCACTGATATCGCGGAAGAAGACGATTATATATGTAGCAACTGTAAAGACGCCGATCAAAGTGCATCGCCTCAGGGAAACCACGGCGGCACCAGCGACACGGAAGCGGACGTCTAG
- Protein Sequence
- MERAENDFDFTVPPEAPVFEPTNEEFLDPLAYIAKIRPIAEQSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTEEGGIDTVTKERRWAKIANKLGYPSGRSVGSILKGHYERILYPFDVFRQGKALSDIKIEPESEEKNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFSGQEEKQDMSIKDECKEECDSDNECKEKIKIKHFNDTDKSKELKKLQFYGPGPKMAGFNTKEAKKSNKTRGLKLVYEFDPLAKYICHNCSRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPILRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYSNLRRFCVFSHDELVCKMSLDPNLLDIGVATATYYDMLQMVEDEKKLRKNLLDWGVTKAVREYFELLPDDERQCEACKTTCFLSAVTCSCHNSQLVCLRHFSDLCDCPPEKHTLRYRYTLDELPTMLQKLKLKSESFESWVTKVKEAMDPKSDKIELSELKELLNEAENKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRHTVDTKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKDAEELDSKEENCDIEKLEKCIDFGDSICIELPELVRLKQRLTQIQWLEEVKSLQEDPKSVSREELAKLIEKSIAIPPHFSIENTRLKLHALTKEIDEWEEKTTAFLQSKSKHTIAEAEEFIKEANKVQAYLPSLDNLEDVLGKAKNWTNMVEEATKENNLPFYDTLDDMIRKGKNIPLQLDALAQLETTLSQAKAWKEKTAKTFLRKNSRYTLLEVLSPRIGVGVQAMKTKKNNKGDESVGAVYVCDTKLDESSDQADVVAAFRVAQQREMDAMRSLRERNLLKMKAEEDSKYCHCKQPRYGIMFQCELCKDWFHTNCVPLSKMFNKGKSPAPKDMRFLCQNCLRSRRPRLETILALLLNLHEIPIRLPEGIALQCLTERAMNWQARVKTLFETQEVDTINKKLNMMSQKLVEAAAREKTEKIISSELKKVANNSELQQRVQNIASASGAHSDDSALSAADEDEDIIDAEPSCSTFNSNEHAYSYISKVRRKTQSSDGEPLSMLSQSARSRLEELMMEGDLLEIELEETQKIWRILSYMNNNQNTMRKYKSLEEIQTNATQEVKDVKKRGRKRRSEEVELLKKPVKKIEEKNTVMKRSKSNPAAKEKRQSNSPIPVKRGPRKIKRRSEGEETPKKRGGNRTKKTKQESSDEEDDCAAENCLRPSGKEVDWVQCDGGCEGWFHMHCVGLDRTDIAEEDDYICSNCKDADQSASPQGNHGGTSDTEADV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01269582; iTF_01270293; iTF_01268055; iTF_01268800; iTF_01267331; iTF_01406285; iTF_01407011; iTF_01408840; iTF_01407948; iTF_01405471; iTF_01423425; iTF_01422018; iTF_00884838; iTF_00765322; iTF_01421342; iTF_00385060; iTF_00129509; iTF_00128746; iTF_00126484; iTF_00127230; iTF_00127967; iTF_01015594; iTF_00109612; iTF_01245005; iTF_01520014; iTF_01228176; iTF_01228802; iTF_01228803; iTF_01098981; iTF_00729849; iTF_00730521; iTF_01523152; iTF_01422705; iTF_00898547; iTF_00014516; iTF_00016481; iTF_00417346; iTF_01475972; iTF_00015176; iTF_01476717; iTF_01477360; iTF_00181106; iTF_01261656; iTF_00182429; iTF_00181760; iTF_01254582; iTF_00452375; iTF_01355096; iTF_01087001; iTF_00125691; iTF_00264795; iTF_00729076; iTF_00264056; iTF_00015840;
- 90% Identity
- iTF_01269582; iTF_01270293; iTF_01268055; iTF_01268800;
- 80% Identity
- -