Acoo000370.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- KDM5A
- Assembly
- GCA_001594045.1
- Location
- NW:506637-522528[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-25 2e-22 78.6 0.0 2 89 108 191 107 191 0.94 2 2 4.3 6e+03 -3.1 0.1 49 81 821 851 818 854 0.61
Sequence Information
- Coding Sequence
- ATGGGCTCGAGAAATCTCGAAAATCGTCCCTGTGGGAATGGGAATCAACCACGTTGCGCCCAAGATATGGCTTGCGATCGCACCGAGACCGACTTTGAGTTCACGGTACCGCCGGAAGCACCGGTGTTTGAGCCGACCAACGAGGAGTTCCACGACCCCCTCGCCTACATCGCCAAGATACGACCGATCGCCGAGAGGTCCGGCATCTGCAAGATTAAACCGCCACCCAACTGGCAGCCACCATTTGCCGTGGACGTAGACAAGTTCAAATTTGTTCCAAGAATACAAAGGTTAAATGAATTAGAAGCCAAAACCAGGATAaagcttaattttttagatcaaattGCAAAGTTTTGGGAGCTTCAAGGTTCCTCCTTGAAAATTCCGCTTGTAGAACGTAAGGCTCTGGACTTGTATTCCTTACACAAAATAGTCACGGACGAAgGCGGTATAGAAACTGTGACTAAGGAAAGAAGATGGGCAAAAATTGCCAATAAATTGGGTTATCCATCTGGACGAAGTGTAGGCAGCATATTGAAGAATCACTATGAGAGAATTTTATATCCGTTTGACGTTTTTAAGCAAGGAAAGACATTGTCAGATATTAAAATTGAACCGGACTCAGACGTTAATGAGAAGAAAGATCGTGATTATAAGCCACATGGCATAATATCTCGGCAGCAAATTAAACCACCGAATGAAAAATTCTCGCGACGATCTAAGCGATTTTCTGGACAAGAAGAAAAGCAAGATGTATCGATTAAACAGGAAGATTGCAAGGAGGAATGCGACTCAGACAATGAGTGCAAGGACAAGATTAAGAGCAGATATTTCAGTTGCGATTTAGATAAAAGTAAAGAActtaaaaagttacaattttaCGGACCAGGCCCGAAAATGGCCGGCTTTAATACCAAAGAgggaaaaaaatctaataaaacgCGTGGCTTGAAACTCGTTTACGACTTTGATCCTttggcaaaatatatttgtcataATTGCGGAAGAGGCgacaatgaagaaaatatgttaCTATGTGACGGATGTGATGACAGTTATCACACGTTTTGCCTTATGCCACCATTGACGGAAATACCAAAGGGAGATTGGCGATGTCCCAAGTGCGTTGCCGAAGAGGTCTCGAAGCCAATGGAGGCATTTGGTTTCGAACAAGCGCAGAGAGAATACACACTGCAGCAATTCGGAGAAATGGCCGATCAATTCAAGAGCGACTACTTTAATATGCCTGTGCATatggTTCCAACATCACTAGTGGAAAAGGAGTTTTGGCGAATAGTCTCGTCTATTGATGAAGACGTGACTGTAGAGTACGGTGCCGATTTGCATACGATGGATCATGGATCCGGATTTCCAACCAAAACCAGCGTTAATTTATTCACTTGTGATCAAGAGTATGCTGAATCTTCGtggaatttgaataatttgccAGTTCTACATGGAAGTGTTTTGGGTCACATCAATGCTGACATTAGTGGCATGAAAGTTCCTTGGATGTATGTCGGCATGTGCTTCGCAACATTCTGTTGGCACAATGAAGATCATTGGAgctattctattaattatctaCATTGGGGCGAACCAAAGACATGGTATGGAGTACCAGGTTCTCAGGCGGAACGCTTCGAACAATCCATGAAGTCCGCCGCTCCAGAGCTGTTTCATAGCCAACCCGATTTGTTGCATCAACTTGTTACTATCATGAATCCAAACATATTGACAAGTGAAGGAGTACCAGTATTTAGAACAGATCAACATGCAGGTGAATTTGTTGTGACATTTCCGAGAGCATACCACGCAGGCTTTAATCAGGGTTACAACTTTGCAGAAGCTGTCAATTTTGCACCTGCAGATTggcTTAAGATTGGACGAGATTGCATCAcgcattattcaaatttaagaaGATTCTGTGTGTTTTCCCATGATGAGCTAGTTTGTAAAATGTCATTGGATCCAGATTCATTAGATATCGGAGTCGCAACCGCCACGTATCACGACATGTTGCAAATGGTGGAGGATGAGAAAAAATTACGGAAAAATTTGCTAGAATGGGGTGTGACTGAGGCAGAACGCGAGGCTTTCGAGCTTCTACCAGATGACGAGAGACAGTGCGAAGCATGCAAGACTACTTGTTTTTTGAGTGCGGTTACATGTTCGTGCCACAGCTCGCAGTTAGTTTGTCTGAGACACTTTGCTGATTTATGTACGTGTCCACCAGAGAAGCATACGCTGCGTTATCGATATACGTTAGACGAATTACCTATCatgttgcaaaaattaaaattgaaagctGAGTCATTTGACTCGTGGGTAGCCAAAGTGAGAGAAGCGATGGATCctaagaatgataaaattgaattaaacgaGTTGAAAGAACTTCTGAATGAAGCTGAGAACAAAAAATTCCCCGAAAGTGAGTTATTGACAGCTTTAACAACCGCTGTGCAAGATGCTGAGAAATGTGCGAGCGTTGCACAACAGctattaaacaataaacaacGCACAAGaaCTAGGCAGACAGTTGATACCAAGTATAAACTCACTGTAGAAGAATTAACACTTTTCTATAAGGAAATAACCAACCTATGCTGTGAACTTAAGGAATCAGATggtgtaaaatttatactcGATCAAGtattacaatttcaaaaagatGCAGCAGAATTGGAATCCAAAGAAGATTGCGACATTGAGAAATTAGAGAAATGCATTGATTTTGGTGATTCTATCTGTATTGAATTACCTCAACTAGTACGATTGAAACAAaaattgaCACAAATACAGTGGCTAGATGAAGTAAAATCTCTCCAAGATGATCCAAAATCTGTTAGTCGTGAAGAGGTGATTAAGTTAATCGAAAAAGGCATGACAATACCACCTCATGTCAGTATTGAAAATACATTGTCAGAATTGCACGCGTTAACAAAGGCAATCGATAAGTGGGAAGAAAAAGCCAAAGTGTTTCTTAACACCAAAAATAGACGAACCATTGCAGCTGTAGAGGAGTTTATTCACGAAGCAGATGAAGTTGAAGCGTATTTACCGAGTTTGGATACTCTTCAAGATGTACTGAACAAAGCAAAGAATTGGACGAAATTGTTTGATGATACACGAGCAAGAGAAAACTTTCCTTATTACGATACATTGGATGACTTGTTAAGAAAGGGAAGAAATATCCCTTTGCATCTAAATGATCTTCCAACGTTGGAATCTATTCTCTTGGAGGCGAAAACATGGAAAGAAAGGACCGCGAGAACTTTTTTGAGGAAAAATTCGCACTATACGCTGATGGAAGCTCTGTCGCCGCGAATCGGCGTCGGCGTACAGGCGATGAAAACTAAGAAGAACAAGGGCGACGAATCCGTAGGCGCTGTTTGTGTTTGTGATACAAAATTGGACGATTCCAGTGACTCGGCGAATGTGGTAGCTGCCTTTAAGCTTGCAGAACAACGCGAAATGGAAGCAATGAGAAGcttaagagagagaaatttaatGAAGATGAAAGCGGAAGCCGAAGATTCCAAGTATTGTGTTTGTCGGCGGCCGAGATTCGGCATTATGCTTCAGTGCGAGCTTTGCAAAGATTGGTTCCACAcAAACTGTGTACCTTTGTCTAAGACACTGTACAAAGGTAAATCGCCAGGGCCGAAggatatgaaatttttgtgtCCATGTTGTCTACGTTCTCGACGACCTCGTCTGGAAACTATATTGGCTCTCTTAGTGAGTCTCCAAAAAATTCCGATCCGATTGCCGGAGGGAGAAGCGTTGCAGTGCTTAACTGAACGTGCGATGAATTGGCAGGATCGAGCGAGGAAAGCATTGTCTACCGACGAAGTTTCATCGATACTAGCAAAACTTTCTGTAATGTCGCAAAAATTAGTAGAAGCTGCGGCAAGGGAGAAAACGGAAAAAATTATCAGTAGCGAGTTGAAAAAGGCAGCGAATAATCCTGAACTGCATCAAAGAGTGCAAGCTATCGCGCCCCTCAGCGGAGTACATTCGGACGATAGCACGCCTAGTACTGCTgacgacgatgacgatgtTATTGCTCTGGATGATGAACCAACATGTAGTACTTTCAATAGTAACGAACACGCATATTCGTATATCTCGAAAATTCGGCGGAAAACTCAATCGAGTGACAATGAGTCATTCGGCACATTATCTTCAAGCACGAGATTGCGTTTGGAAGAACTTATGATGGAAGGTGACTTATTAGAAGTTGCTTTAGACGAAACACAACACATTTGGCGTATACTGAGTTATATGAATAGCCACAACACTATGCGAAAATACAAATCGCTTGAAGAAGTTCAAGCAAATCAGGAGGTGAAAGATGTGAAGAAACGGGGTAGAAAGAGGAAATCGGAGGAGTTTGAATTACTTAAGAAAGTTGGACGTCAAAAAGttgaagagaaaaatgtaattaaacgtAGCAAAAGCAGCGGCCCTATCACTAAGGAGAAGAGGCAGAGCAGTTCACCGGTTCCTATGAAACGTGGACCTCGAAAGATGAAACGCAAAAGCGAAAGTGAGGAAAGCCCTAGAAAACGAGGTGGTAATCGCACAAAGAAGACTAAGCAAGAAAGTTCGGATGAGGAGGATGATTGCGCGGCGGTTAATTGCTTACGGCCTAGTGgTAAGGAAGTTGATTGGGTTCAGTGTGATGGTGGCTGCGAAGGTTGGTTCCATATGCATTGTGTCGGATTGGATCGTACAGAAATTGCGGAGGAAGATGATTATATTTGTAGCAACTGTAAAGAAGCCGATCAAAGTGCATCGGTAAGGAAAAAAGTGTTCGGAAAAACATAA
- Protein Sequence
- MGSRNLENRPCGNGNQPRCAQDMACDRTETDFEFTVPPEAPVFEPTNEEFHDPLAYIAKIRPIAERSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLSDIKIEPDSDVNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFSGQEEKQDVSIKQEDCKEECDSDNECKDKIKSRYFSCDLDKSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGLKLVYDFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLHGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEQSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRDCITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGVATATYHDMLQMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFADLCTCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVAKVREAMDPKNDKIELNELKELLNEAENKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQTVDTKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKDAAELESKEDCDIEKLEKCIDFGDSICIELPQLVRLKQKLTQIQWLDEVKSLQDDPKSVSREEVIKLIEKGMTIPPHVSIENTLSELHALTKAIDKWEEKAKVFLNTKNRRTIAAVEEFIHEADEVEAYLPSLDTLQDVLNKAKNWTKLFDDTRARENFPYYDTLDDLLRKGRNIPLHLNDLPTLESILLEAKTWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKKNKGDESVGAVCVCDTKLDDSSDSANVVAAFKLAEQREMEAMRSLRERNLMKMKAEAEDSKYCVCRRPRFGIMLQCELCKDWFHTNCVPLSKTLYKGKSPGPKDMKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARKALSTDEVSSILAKLSVMSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSTPSTADDDDDVIALDDEPTCSTFNSNEHAYSYISKIRRKTQSSDNESFGTLSSSTRLRLEELMMEGDLLEVALDETQHIWRILSYMNSHNTMRKYKSLEEVQANQEVKDVKKRGRKRKSEEFELLKKVGRQKVEEKNVIKRSKSSGPITKEKRQSSSPVPMKRGPRKMKRKSESEESPRKRGGNRTKKTKQESSDEEDDCAAVNCLRPSGKEVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEADQSASVRKKVFGKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01270981;
- 90% Identity
- iTF_01015594;
- 80% Identity
- -