Pgra003746.1
Basic Information
- Insect
- Pseudomyrmex gracilis
- Gene Symbol
- KDM5A
- Assembly
- GCA_002006095.1
- Location
- NW:818590-838144[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-25 4.2e-22 77.7 0.0 2 89 84 167 83 167 0.94 2 2 7 1.1e+04 -3.9 0.1 49 78 796 823 794 828 0.57
Sequence Information
- Coding Sequence
- ATGGAACGCGCGGAGAACGACTTCGAGTTCACGGTGCCGCCAGAAGCACCGGTGTTCGAGCCCACTAACGACGAGTTTCTAGACCCTCTGGCTTACATCGCGAAGATACGCCCGATCGCCGAGCAGTCCGGCATCTGCAAGATCAAACCACCGCCTAATTGGCAGCCACCTTTCGCCGTGGACGTGGACAAGTTCAAATTCGTTCCGCGAATACAACGGCTAAACGAATTAGAAGCCAAAACGAGGATTAAACTCAATTTTTTAGaccaaattgcaaaattttggGAACTGCAAGGTTCATCCTTGAAGATTCCGCTTGTGGAACGGAAGGCTCTGGATTTGTATTCGTTGCATAAAATAGTTACCGAGGAAGGCGGTATAGATACGGTAACGAAGGAAAGAAGATGGGCAAAAATCGCCAACAAATTGGGTTACCCGTCCGGACGAAGCGTGGGCAGTATATTGAAAGGACACTACGAGAGAATTTTATATCCTTTTGACGTCTTCAGACAAGGAAAAGCATTGTCAGATATTaaaattgaACCAGAAtccgaagaaaaaaatgagaaaaaagatcGCGATTACAAACCTCACGGTATAATATCGCGGCAACAGATCAAACCTCCGAACGAGAAATTCTCACGACGATCCAAGCGATTTTCTGGACAAGAAGAGAAGCAGGATGTGTCGATTAAAGACGAGTGCAAGGAGGAGTGCGATTCGGACAATGAGTGCAAggagaagataaaaattaagcaTTTTAATGACACGGATAAGAGTAAGGAACTCAAGAAATTACAGTTTTACGGCCCAGGTCCCAAAATGGCCGGTTTTAATACCAAAGAGGCGAAGAAATCTAACAAAACGCGCGGTTTAAAGCTTGTTTACGAATTCGATCCGttagcgaaatatatttgtcacaATTGCGGGAGAGGCGACAATGAGGAGAACATGTTACTCTGCGACGGTTGCGACGACAGTTATCACACTTTTTGCCTTATGCCACCATTGACGGAAATACCGAAGGGCGATTGGCGGTGTCCTAAGTGCGTCGCTGAAGAGGTCTCGAAGCCAATGGAGGCGTTCGGCTTCGAACAAGCGCAGAGAGAATACACATTACAGCAATTCGGAGAAATGGCTGATCAATTCAAAAGCGATTATTTCAATATGCCAGTACATATGGTCCCGACGTCTTTGGTGGAAAAAGAATTTTGGCGAATAGTATCGTCCATCGACGAAGACGTAACTGTCGAATATGGCGCCGATTTGCATACAATGGATCACGGGTCTGGATTCCCGACGAAAACTAGCGTTAACTTATTCACTTGCGATCAAGAATACGCCGAATCGTCGTGGAATCTGAATAATTTGCCGATATTGCGCGGCAGCGTTCTGGGTCACATTAACGCCGATATAAGCGGCATGAAAGTTCCCTGGATGTACGTCGGTATGTGCTTCGCAACATTCTGCTGGCACAACGAAGATCACTGGAGCTATTCCATCAATTATCTGCACTGGGGCGAGCCGAAGACGTGGTACGGAGTCCCAGGCTCTCAGGCGGAACGTTTCGAACAGTCCATGAAATCCGCCGCGCCAGAACTATTTCACAGTCAGCCTGATCTGTTGCATCAACTTGTTACTATCATGAATCCTAATATACTAACGAATGAAGGCGTACCAGTGTTCAGAACTGATCAGCACGCAGGCGAGTTTGTTGTAACATTTCCGAGAGCGTATCACGCAGGTTTCAATCAGGGTTATAATTTTGCGGAAGCTGTCAATTTCGCACCTGCGGATTGGctAAAAATCGGACGAGAGTGCATCACGCATTATTCAAATTTGAGAAGATTCTGTGTGTTTTCCCACGATGAGCTAGTTTGTAAAATGTCTCTGGATCCAAACCTATTAGATATTGGAGTAGCAACAGCTACTTATTACGACATGCTGCAGATGGTAGAGGATGAGAAAAAACTACGGAAAAATCTGCTAGATTGGGGTGTAACAAAAGCAGTACGCGAATACTTCGAGCTTCTACCGGACGATGAGAGACAGTGCGAAGCGTGTAAGACCACCTGTTTCCTCAGTGCGGTTACATGTTCGTGTCACAGCTCACAGTTGGTTTGTCTAAGACATTTTTCTGACCTGTGCGACTGTCCACCAGAAAAGCATACTCTGCGATACAGATATACATTGGATGAATTGCCCACCATGTTGCAAAAGTTGAAACTTAAGGCTGAGTCGTTTGACTCGTGGGTGACCAAAGTGAAGGAAGCAATGGACCCTAAAAGCGATAAAATTGAATTGAGCGAACTGAAGGAATTGCTGAACGAGgcggaaaacaaaaagtttccTGACAGTGAATTGCTCACTGCTCTGACAACTGCTGTGCAGGATGCTGAGAAGTGTGCCAGTGTTGCGCAACAGCTCTTAAATAACAAGCAACGTACCAGGACTAGGCATACAGTTGATACCAAGTACAAACTGACAGTAGAAGAATTGACACTTTTCTACAAGGAAATAACCAATCTCTGCTGTGAGCTTAAAGAATCGGACGGTGTAAAGTTCATACTCGATCAAGTATTACAGTTCCAAAAGGATGCGGAAGAATTGGATTCCAAAGAAGAAAATTGTGACATCGAGAAACTTGAGAAGTGTATCGATTTTGGTGATTCTATCTGCATTGAACTTCCTGAACTAGTACGATTGAAACAGaGATTGACACAAATACAGTGGCTGGAAGAAGTGAAGTCTCTTCAGGACGATCCTAAATCCGTCAGTCGGGAAGAATTAGCGAAATTAATCGATAAAGGCATAACAATACCACCTCATTTTAGTATCGAGGACACTCTGACGAAATTACACGCGTTAACAAAAGAGATCGATGAATGGGAAGAAAAAACTACGGCGTTCTTGCAAAGCAAGTCTAAACGCACAATCGCGGAAGTGGAGGAGTTTATTAAAGAGGCAAATAAAGTTCAGGCGTATCTACCGAGTTTGGACAATCTCGAGGATGTGTTGAGCAAAGCGAAAAACTGGACAAATATGGTGGAAGAAGCAACGAAGGAAAACAATTTACCTTTTTACGATACTTTGGACGATATGATAAGGAAAGGCAAGAACATCCCGTTGCAATTAGACGCCCTCGCGCAACTGGAAACCACTTTGTCGCAGGCAAAAGCGTGGAAAGAGAAGACGGCAAAGACATTCCTTAGAAAGAACTCGCGATACACGTTGATGGAAGTGCTGTCGCCGCGAATTGGCGTTGGCGTGCAAGCGATGAAGACCAAAAAGAACAACAAAGGCGACGAGAGCGTGGGAGCCGTTTATGTCTGTGATACTAAATTGGACGAGTCCAGTGATCAGGCAGACGTGGTAGCTGCTTTTAGAGTGGCGCAGCAACGCGAGATGGATGCGATGAGAagtttgagagagagaaacctgcTGAAAATGAAAGCGGAAGAAGATTCGAAATACTGTCATTGTAAGCAACCGAGATACGGCATTATGTTTCAATGTGAGCTCTGCAAAGACTGGTTTCACACAAACTGTGTACCCTTGTCTAAGATGTTCAACAAAGGTAAATCACCAGCGCCGAAGGACATGAGATTTTTGTGTCAGAATTGTCTGCGTTCACGTCGACCTCGCCTGGAAACGATACTAGCCCTCTTACTGAATCTCCATGAAATCCCGATCCGGTTGCCGGAAGGCATAGCATTGCAATGCTTAACAGAACGAGCGATGAATTGGCAGGCTCGAGTGAAGACATTATTTGAAACTCAAGAGGTAGACACGATAAACAAGAAACTCAACATGATGTCGCAAAAGTTGGTAGAAGCGGCGGCAAGGGAAAAGACGGAGAAAATCATTAGCAGCGAGTTGAAGAAAGTAGCGAATAATTCCGAATTGCAGCAACGAGTGCAAAACATCGCGTCTGCCAGTGGAGCACATTCGGATGATAGCGCGCTCAGTGCTGCCGATGAAGACGACGATATTATTGACGCTGAACCGTCATGTAGTACTTTCAACAGTAATGAGCATGCATATTCATACaTCTCGAAGGTTCGGCGGAAAACTCAATCGAGTGACGGCGAATCGTTGAGTATGTTGTCGCAAAGCGCGAGATCGCGTTTGGAGGAATTGATGATGGAGGGCGATCTTTTGGAGATCGAACTGGAAGAGACGCAAAAGATCTGGCGTATCTTGAGTTACATGAACAACAATCAGAACACAATGCGGAAATACAAGTCGCTGGAAGAGATTCAGACGAACACCACTCAGGAAGTGAAAGACGTCAAGAAACGTGGTAGGAAGAGAAAATCGGAGGAGTTGGAATTATTGAAGAAACCTGTGAAGAAGATCGAAGAGAAGAATACCGTGATAAAGCGCAGCAAGAGCAATCCGGCCGCCAAGGAGAAGAGGCAGAGCAATTCGCCTGTCCCCGTTAAGCGCGGACCTCGAAAgGTGAAACGTAAGAGCGAGGGTGAGGAAACACCTAAGAAACGAGGTGGTAATCGCACAAAGAAGACCAAGCAAGAGAGCTCGGACGAAGAAGACGACTGCGCGGCGGAAAACTGCTTACGGCCTAGTGGTAAAGAAGTTGATTGGGTTCAGTGCGACGGTGGCTGCGAAGGTTGGTTCCATATGCACTGTGTCGGATTGGATCGCACTGATATCGCGGAAGAAGACGATTATATATGTAGCAACTGTAAAGACGCCGATCAAAGTGCAtcgCCTCAGGGAAACCACGGCGGCACCAGCGACACGGAAGCGGACgtctag
- Protein Sequence
- MERAENDFEFTVPPEAPVFEPTNDEFLDPLAYIAKIRPIAEQSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTEEGGIDTVTKERRWAKIANKLGYPSGRSVGSILKGHYERILYPFDVFRQGKALSDIKIEPESEEKNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFSGQEEKQDVSIKDECKEECDSDNECKEKIKIKHFNDTDKSKELKKLQFYGPGPKMAGFNTKEAKKSNKTRGLKLVYEFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPILRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEQSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYSNLRRFCVFSHDELVCKMSLDPNLLDIGVATATYYDMLQMVEDEKKLRKNLLDWGVTKAVREYFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFSDLCDCPPEKHTLRYRYTLDELPTMLQKLKLKAESFDSWVTKVKEAMDPKSDKIELSELKELLNEAENKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRHTVDTKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKDAEELDSKEENCDIEKLEKCIDFGDSICIELPELVRLKQRLTQIQWLEEVKSLQDDPKSVSREELAKLIDKGITIPPHFSIEDTLTKLHALTKEIDEWEEKTTAFLQSKSKRTIAEVEEFIKEANKVQAYLPSLDNLEDVLSKAKNWTNMVEEATKENNLPFYDTLDDMIRKGKNIPLQLDALAQLETTLSQAKAWKEKTAKTFLRKNSRYTLMEVLSPRIGVGVQAMKTKKNNKGDESVGAVYVCDTKLDESSDQADVVAAFRVAQQREMDAMRSLRERNLLKMKAEEDSKYCHCKQPRYGIMFQCELCKDWFHTNCVPLSKMFNKGKSPAPKDMRFLCQNCLRSRRPRLETILALLLNLHEIPIRLPEGIALQCLTERAMNWQARVKTLFETQEVDTINKKLNMMSQKLVEAAAREKTEKIISSELKKVANNSELQQRVQNIASASGAHSDDSALSAADEDDDIIDAEPSCSTFNSNEHAYSYISKVRRKTQSSDGESLSMLSQSARSRLEELMMEGDLLEIELEETQKIWRILSYMNNNQNTMRKYKSLEEIQTNTTQEVKDVKKRGRKRKSEELELLKKPVKKIEEKNTVIKRSKSNPAAKEKRQSNSPVPVKRGPRKVKRKSEGEETPKKRGGNRTKKTKQESSDEEDDCAAENCLRPSGKEVDWVQCDGGCEGWFHMHCVGLDRTDIAEEDDYICSNCKDADQSASPQGNHGGTSDTEADV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01270981;
- 90% Identity
- iTF_01270981;
- 80% Identity
- -