Lhum002067.1
Basic Information
- Insect
- Linepithema humile
- Gene Symbol
- KDM5A
- Assembly
- GCA_000217595.1
- Location
- NW:3234026-3249669[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-25 2.2e-22 78.5 0.0 2 89 104 187 103 187 0.94 2 3 7 1.1e+04 -3.9 0.1 49 78 818 845 816 850 0.57 3 3 5.1 8e+03 -3.4 0.0 49 65 1028 1044 1025 1051 0.77
Sequence Information
- Coding Sequence
- ATGATGAGTTCCAAGAGCAACAACGAGAGCCGCAATTGCGGAAATAATCGCGACATGACCTGCGAACGCACTGAGAACGATTTTGAGTTCACGGTGCCGCCAGAGGCGCCGGTATTCGAGCCCCACATCGACGAGTTCTACGATCCGCTTGTCTACATCGCGAAAATACGGCCAATCGCCGAGATCTTCGGTATCTGCAAGATTAAACCACCGCCTAATTGGCAGCCACCGTTCGCTGTAGATGTGGACAAGTTCAAATTTGTGCCGAGAATACAAAGGTTAAACGAATTAGAAGCTAAGACCAGGATAAAGCTGAACTTCTTAGATCAAATCGCGAAATTCTGGGAGCTTCAAGGTTCCTCTTTGAAGATCCCGCTTGTAGAACGCAAGGCGCTGGACTTGTATTCCTTACATAAAATAGTCACAGACGAAgGCGGCATAGAAACTGTAACGAAGGAAAGAAGGTGGGCAAAAATTGCCAATAAACTGGGTTATCCATCCGGACGAAGCGTAGGCAGTATATTGAAGAATCATTACGAGAGAATTTTATATCCTTTTGACGTATTCACGCAAGGAAAGACATTGTCAGATATTaaaatcgAACCAGAGTCGGACGAGAAGAACGAGAAGAGAGATCGCGATTACAAGCCACATGGTATAATATCTCGACAGCAAATTAAACCAcctaatgaaaaattttcacgGCGATCCAAGCGCTATTCCGGACAAGATGAGAAGCAAGATCCATCGATTAAACAAGAGGATTGCAAGGAGGAGTGCGACTCGGACAACGAGTGCAaggacaaaattaaaatcaagaattttaattccGACCCGGATAAGAGCAAGGAGCTCAAGAAGTTACAATTTTATGGACCAGGCCCGAAAATGGCTGGTTTTAATACCAAAGAGGGAaagaaatctaataaaacGCGCGGCTTGAAACTTGTTTATGATTTCGATCCTctggcaaaatatatttgccaCAATTGTGGAAGAGGCGATAACGAAGAAAGCATGTTGTTATGCGATGGTTGCGACGACAGCTATCACACTTTTTGCCTTTTGCCGCCTTTGACGGAAATACCAAAGGGCGACTGGCGGTGTCCCAAGTGCGTCGCTGAAGAGGTTTCAAAACCGATGGAGGCGTTCGGTTTCGAACAGGCGCAGAGGGAATACACGCTGCAGCAATTCGGAGAAATGGCTGATCAATTCAAGAGCGATTACTTCAATATGCCCGTGCATatgGTTCCAACATCGCTAGTGGAGAAAGAATTTTGGCGAATAGTATCGTCGATTGATGAGGACGTGACTGTGGAATATGGTGCAGATTTACACACGATGGATCATGGATCAGGATTTCCAACCAAAACCAGCGTTAACTTGTTTACTTGCGATCAGGAGTATGCCGAATCTTCATGGAATCTAAACAATCTGCCGGTCTTGGGTGGCAGCGTTTTAGGTCACATTAACGCTGATATCAGCGGTATGAAAGTTCCTTGGATGTACGTTGGCATGTGCTTTGCGACATTCTGCTGGCACAATGAGGATCACTGGAGCTATTCCATTAATTACCTTCACTGGGGTGAACCAAAGACATGGTATGGAGTGCCGGGTAAACAAGCGGAACGGTTCGAGCACACTATGAAATCAGCCGCGCCGGAACTATTTCACAGTCAGCCCGATCTATTGCATCAACTTGTTACCATTATGAATCCGAACATATTGATGAAAGAAAAAGTGCCAGTATACAGAACTGATCAGCATGCAGGCGAGTTTGTGGTGACATTTCCGAGAGCGTATCATGCTGGTTTCAACCAGGGCTATAATTTCGCAGAAGCTGTGAATTTCGCACCTGCTGATTGgCTCAAAATTGGACGGGACTGCATCAcgcattattcaaatttgcgGAGATTCTGTGTATTTTCTCACGACGAATTGGTTTGCAAAATGTCTCTGGATCCAGATGCATTAGATATCGGGATCGCAACCGCTACGTATCACGACATGCTGCAAATGGTGGAGGACGAGAAAAAACTACGAAAGAATTTGCTGGAATGGGGCGTGACAGAAGCAGAACGTGAGGCATTTGAGCTTTTGCCAGATGATGAAAGACAGTGTGAAGCATGTAAGACCACCTGCTTCCTCAGTGCAGTTACATGCTCGTGTCACAGTTCGCAGTTAGTTTGTCTCAGACATTACGCGGAACTTTGTAACTGTCCACCAGAGAAACACACACTTCGTTATCGATATACGTTGGACGAATTACCGATCATGCTGCAGAAGTTGAAGCTCAAAGCTGAGTCATTCGACTCATGGGTGACCAAAGTGAAAGAAGCGATGGATCCCAAAAACGACAAAATTGAGCTGACCGAGTTGAAAGAACTCCTAAATGAAGCTGAGAACAAGAAGTTCCCAGAGAGTGAATTGCTGACAGCTTTAACCACAGCTGTACAAGATGCTGAGAAGTGCGCGAGTGTTGCGCAACAACTCTTGAACAATAAACAGCGTACAAGGACCAGGCATACAGTtgacacaaaatataaacttacTGTTGAAGAACTAACACTCTTCTACAAAGAAATAAGCAATCTATGCTGTGAATTAAAGGAATCAGACggtgtaaaatttatcttgGATCAGGTATTACAGTTTCAGAAGGACGCGGAAGAGTTGGAATCTAAAGTGGAAGATTGCGATATTGAAAAGTTGGAAAAATGCATTGATTTTGGAGATTCCATCTGCATTGAATTGCCTCAACTCGTGAAATTGAAACAAaggTTGGCGCAAATACAATGGCTCGAGGAAGTAAAAGCCCTTCAGGACGATCCTAAATCGGCCAGTCGCGAAGAACTGACAAAGTTGATTGAGAAGGGCATGATAATACCGCCTCATTTTAGTATCGAGAATACATTGTCGGAATTGCACGCGTTAACAAAGGCGATTGATAAATGGGAAGAAAAGGCCAAGGCGTTTCTTCAGACGAAAAATAGACGTACAATCACGGCTGTGGAAGAGTTTATTCACGAGGCGGACGAAGTCGAAGCATACCTGCCGAGCTTGGACACTCTTCAAGACATGCTAAACAAGGCAAAGAACTGGACAAAAATAGTAGACGACATACAAGCGAAAGAAACTTTTTCGTATTACGATACTCTGGATGATCTAATAAGAAAGGGAAGAAACATACCGCTGCATCTGGACGCTCTTCCGATATTGGAATCCACCCTGTCACAGGCTAAAGCGTGGAAAGAAAGGACTGCGAGGACATTCCTGAGGAAGAATTCGCACTACACGTTGATGGAAGCCTTGTCGCCACGGATCGGCGTCGGCGTGCAGGCGATGAAAACCAAGAAAAACAAAGGCGACGAATCCGTGGGCGCCGTTTATGTCTGTGATACGAAACTGGACGACTCCAGCGATTCGGCGACCGTCGTGGCTGCCTTTAAGCTGGCGGAGACACGAGAGATGGAGGCGATGAGGAGTCTGAGGGAGAGGAACTTGATGAAGATGAAAGCGGAAGTGGAAGACGCCAAGTATTGCGTCTGTCGACGACCAAGATACGGCATCATGCTTCAGTGCGAGCTCTGCAAGGATTGGTTCCACAcaAATTGCGTGCCTCTGCCTAAAACATCGTACAAAGGTAAACCACCAGGGCCGACAGACATGAAATTCCTGTGTCCGTGCTGTCTGCGTTCTCGACGACCTCGTCTGGAAACGATATTAGCCATCCTGGTGAGCCTCCAAAAAATTCAGATTCGCCTACCAGAAGGAGAGGCGTTGCAATGCCTAACGGAGCGTGCAATGAATTGGCAGGATCGAGCGAGGCAAGCACTGGCTACCGAAGAGATCTCGTCGATACTGGGAAAGCTGGCTATGATGTCGCAAAAATTGGTAGAAGCCGCGGCGAGGGAAAAGACGGAGAAAATTATCAGTAGCGAGTTGAAGAAAGCAGCGAATAATCCCGAACTGCATCAGAGAGTGCAAGCTATCGCACCCCTCAGCGGAGTGCATTCGGATGATAGCGCGCTTAGTACTGCAgatgacgatgacgatgttATCGCCATGGATGACGAACCGACCTGTAGTACTTTCAACAGTAATGAACACGCATATTCATACATTTCGAAAGTTCGGCGAAAAAATCAATCGAGCGATAACGGCGGCGAATCGCTGGCCCTGTTATCGTCAAGTGCAAGGTCACGTTTGGAGGAACTCATGATGGAGGGCGATCTGTTGGAAGTCGCCTTGGACGAGACACAGCATATATGGCGTATTTTAAGTCACGTAAATACGCAAAACACTACACGGAAATACAAGTCGTTTGACGAAGTTCAAACGAACGCCAATCAGGAGGCAAAGGACGTGAAGAAACGGGgtagaaagagaaaatcagaagaatttgaattattgaagaaaattggaCGGCAAAAGGTCGAAGAAAAGAATGCAGTCAAACGGAGCAAAAGCGGCCCTGCTGCCAAAGAGAAGAGGCAGAGCAGTTCGCCGGTGCCTGTGAAGCGCGGACCTCGAAAGATGAAACGCAAGAGCGAGAGTGAGGAAATCCCTAAGAAGCGAGGTGGTAATCGCACGAAGAAGACAAAGCAAGAGAGCTCGGACGAAGAGGATGATTGCGCGGCGGTTAACTGTCTGCGGCCTAGTGGTAAGGAAGTTGATTGGGTTCAGTGTGACGGTGGCTGCGAAGGTTGGTTCCATATGCATTGTGTCGGATTGGATCGCACAGATATCGCAGAGGAAGACGATTATATTTGTAGCAACTGTAAAGAAGCCGATCAAAATGCATCGTCGAGATCCCCGCCAGATCCGGCTGAATCATTAGGTCTGGATGCACTTCTTTCCCTTTCTCAGCCCCAGGAGTACCACGGCAGCACCACCGACACGGAGGCGGGCGTCTAG
- Protein Sequence
- MMSSKSNNESRNCGNNRDMTCERTENDFEFTVPPEAPVFEPHIDEFYDPLVYIAKIRPIAEIFGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFTQGKTLSDIKIEPESDEKNEKRDRDYKPHGIISRQQIKPPNEKFSRRSKRYSGQDEKQDPSIKQEDCKEECDSDNECKDKIKIKNFNSDPDKSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGLKLVYDFDPLAKYICHNCGRGDNEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLGGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGKQAERFEHTMKSAAPELFHSQPDLLHQLVTIMNPNILMKEKVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRDCITHYSNLRRFCVFSHDELVCKMSLDPDALDIGIATATYHDMLQMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHYAELCNCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKNDKIELTELKELLNEAENKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRHTVDTKYKLTVEELTLFYKEISNLCCELKESDGVKFILDQVLQFQKDAEELESKVEDCDIEKLEKCIDFGDSICIELPQLVKLKQRLAQIQWLEEVKALQDDPKSASREELTKLIEKGMIIPPHFSIENTLSELHALTKAIDKWEEKAKAFLQTKNRRTITAVEEFIHEADEVEAYLPSLDTLQDMLNKAKNWTKIVDDIQAKETFSYYDTLDDLIRKGRNIPLHLDALPILESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKKNKGDESVGAVYVCDTKLDDSSDSATVVAAFKLAETREMEAMRSLRERNLMKMKAEVEDAKYCVCRRPRYGIMLQCELCKDWFHTNCVPLPKTSYKGKPPGPTDMKFLCPCCLRSRRPRLETILAILVSLQKIQIRLPEGEALQCLTERAMNWQDRARQALATEEISSILGKLAMMSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSTADDDDDVIAMDDEPTCSTFNSNEHAYSYISKVRRKNQSSDNGGESLALLSSSARSRLEELMMEGDLLEVALDETQHIWRILSHVNTQNTTRKYKSFDEVQTNANQEAKDVKKRGRKRKSEEFELLKKIGRQKVEEKNAVKRSKSGPAAKEKRQSSSPVPVKRGPRKMKRKSESEEIPKKRGGNRTKKTKQESSDEEDDCAAVNCLRPSGKEVDWVQCDGGCEGWFHMHCVGLDRTDIAEEDDYICSNCKEADQNASSRSPPDPAESLGLDALLSLSQPQEYHGSTTDTEAGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01270981;
- 90% Identity
- iTF_01015594;
- 80% Identity
- -