Pmex023502.1
Basic Information
- Insect
- Polyergus mexicanus
- Gene Symbol
- KDM5A
- Assembly
- GCA_030449975.1
- Location
- JAUDSZ010000013.1:3412982-3435484[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-25 7.4e-22 78.9 0.0 2 89 102 185 101 185 0.94 2 2 4.3 2.2e+04 -2.8 0.1 49 81 815 845 812 849 0.64
Sequence Information
- Coding Sequence
- ATGGGATCGAAAAGCAACTGCGGGAATCAACGTTGCGTCCAAGACAACATGGCTTGCGACCGCGCCGAGAGCGACTTTGAGTTTACGGTACCACCAGAGGCGCCGGTGTTCGAACCCACCAACGAGGAGTTTCACGACCCGCTCGCCTACATTGCGAAAATACGGCCGATTGCTGAGAAGTCCGGTATCTGCAAGATCAAACCTCCGCCCAATTGGCAGCCACCATTCGCCGTAGACGTagacaaatttaaatttgttccGAGAATACAAAGATTAAATGAATTAGAAGCTAAAACCAGGATAAAGCTTAATTTCTTAGATCAAATTGCAAAATTCTGGGAGCTCCAAGGTTCCTCCTTAAAGATTCCACTTGTAGAACGTAAGGCATTGGATTTATACTCCTTACATAAAATAGTCACAGATGAAGGGGGCATAGAAACTGTAACAAAAGAAAGAAGGTGGGCAAAAATTGCCAACAAAATGGGTTACCCATCCGGACGAAGCGTAGGCAGCATATTGAAGAATCACTATGAGAGAATTTTATATCCATTTGATGTCTTCAAACAAGGAAAAACATTGTCAGATATCaaattcgAACCAGACTCAGACGTGAACGAGAAAAGGGATCGCGATTATAAGCCGCACGGTATAATATCTCGTCAGCAAATTAAACCACCAAATGAGAAATTCTCGCGGCGATCCAAACGGTATTCCGGCCAAGAAGAGAAGCAGGATGTATCAATTAAACAAGAGGACTATAAGGAGGAATGCGACTCGGACAACGACTGCAAggataaagttaaaaataggCATTTTAGTTTTGACACGGACAAAAGCAAGGAGCTTaagaaattacaattttatggACCAGGTCCGAAAATGGCCGGTTTTAATACCAAAGAGGGGAAGAAATCTAATAAGACTCGTGGTTTGAAACTCGTTTACGATTACGATCCTTTAGCAAAATACATTTGTCACAATTGCGGAAGAGGTGACAACGAGGAGAACATGCTGTTGTGCGACGGTTGCGACGACAGTTATCACACTTTTTGTCTTATGCCGCCATTGACAGAAATACCAAAGGGTGATTGGCGATGTCCCAAGTGCGTTGCTGAAGAAGTCTCTAAGCCTATGGAGGCGTTCGGCTTTGAACAAGCGCAAAGAGAATACACGTTGCAGCAATTCGGAGAAATGGCCGATCAATTTAAAAGTGATTACTTTAATATGCCTGTTCATATGGTTCCAACATCACTGGTGGAGAAGGAATTCTGGCGAATAGTCTCGTCTATTGATGAGGATGTAACTGTGGAATACGGCGCTGATTTGCATACGATGGATCACGGATCCGGATTTCCGACCAAGACCAGCGTCAATTTATTCACCTGCGATCAAGAATATGCCGAATCTTCGTGGAATTTAAATAATCTGCCAGTCTTGCGTGGCAGCATCTTAGGTCATATTAACGCTGATATCAGTGGCATGAAAGTTCCTTGGATGTATGTTGGTATGTGTTTTGCCACATTCTGTTGGCACAACGAAGATCATTGGAGCTATTCCATCAATTATCTACATTGGGGCGAACCAAAGACATGGTACGGTGTGCCTGGCTCTCAGGCAGAGCGCTTTGAACACTCCATGAAATCCGCCGCGCCAGAACTGTTTCACAGTCAGCCTGATCTATTGCATCAGCTTGTCACCATTATGAATCCGAACATATTGACAAACGAAGgAGTGCCAGTATTTAGAACAGACCAGCATGCAGGCGAATTTGTTGTGACATTTCCGAGGGCATATCACGCAGGTTTTAATCAGGGTTACAATTTCGCTGAAGCCGTCAATTTTGCACCTGCGGATTGGCTTAAGGTTGGACGAGAATGTATCACGCACTATTCAAATTTGCGGAGATTTTGTGTATTTTCTCACGATGAGTTAGTTTGTAAAATGTCGCTGGATCCGGATTTGTTAGATATTGGTATCGCAACCGCCACATATTACGATATGCTGCAAATGGTAGAAGATGAgaaaaaattacgaaaaaacTTGCTGGAGTGGGGTGTGACAGAAGCGGAACGTGAGGCATTCGAACTTTTACCGGACGATGAGAGACAGTGCGAAGCATGTAAAACCACCTGCTTCCTGAGTGCTGTTACATGCTCGTGCCACAATTCACAGTTAGTTTGTTTGAGACACTTTGCTGATCTGTGCACCTGTCCACCAGAAAAACATACACTGCGTTATCGGTATACATTGGACGAATTACCAATCATGCTGCAGAAATTAAAACTGAAGGCTGAGTCGTTTGACTCGTGGGTGACTAAAGTGAAAGAGGCGATGGATCCCAAGAACGACAAAATTGAACTAAGTGAATTGAAGGAGCTCCTCAATGAGGCTGAGAACAAAAAATTCCCCGAGAGTGAATTACTCACGGCTCTAACCACCGCTGTGCAAGATGCTGAGAAATGTGCAAGTGTCGCGCAACAGCTGTTGAACAATAAACAGCGTACAAGgACTAGGCAATCAGTTGATACCAAGTATAAACTTACTGTAGAAGAATTAACACTTTTCTATAAAGAGATAACCAACTTGTGCTGTGAACTTAAAGAATCGGATGGTGTAAAGTTCATACTCGATCAAGTATTGCAGTTTCAAAAAGATGCAGAAGAACTGGAGTCTAAAGATGAAGAGTGCGATGttgagaaattgaaaaaatgcaTCGACTTTGGAGACTCCATCTATATTGATCTGCCTCAACTTGTACTATTGAAACAGagaTTAGCACAGATACAGTGGTTGGAAGAAGTAAAATCCCTCCAAGACGATCCAAAAGCTGTCAGTCGTGAAGAGGTTGCGAAGTTGATTGAGAAGGGCATGACGATACCGCCTCACTTCAGTATCGAAAATATGCTATCGGAATTGCATGCGTTAACAAAAGCAATTGATAAGTGGGAAGAGAAGGCCAAGATATTTCTTCACATAAAAAATAGACGAACCATTGCCAGTGTGGAGGAATTTATTCGCGAGGCAGATGAAGTTGAAGCGTACTTGCCGAGTTTAGATAATCTTCAGGACACATTGAATAAAGCGAAGAATTGGACGAAGCTCGTAGATGAGATACAagcgaaagaaaattttccatATTACGATACTCTGGACGATTTGATAAGAAAAGGCAGAAATATCTCGTTGCATCTGGACGCCCTTCCGATGCTGGAATCTACACTCTCGCAAGCAAAAGCATGGAAGGAGAGGACTGCGAGAACATTCCTAAGGAAAAATTCTCACTATACATTGATGGAAGCTCTATCTCCGCGAATTGGTGTCGGAGTGCAGGCGATGAAGACCAAAAAGCATAAGGGTGACGAGTCTATAGGGGCTGTTTATGTCTGTGATACAAAATTGGATGATTCTAGTGATTCGGCGAATGTGGTCGCTGCTTTTAAGCTAGCGGAGCAGCGCGAGATGGAAGCAATGAGAAGCTTAAGAGAAAGAAATCTGATGAAGATGAAAGCCGATGTTGAAGATTCCAAATACTGCGTCTGTCGGCGATCAAGATTTGGTATTATGCTTCAGTGCGAGCTTTGCAAAGATTGGTTTCACAcAAATTGCGTGCCTCTACCTAAGACATCGTACAAAGGTAAACCACCAGGTCCAAGGGACATAAAGTTTTTGTGTCCGTGTTGTCTACGTTCTCGACGACCTCGTTTAGAGACGATACTAGCCCTCTTAgATCGAGCGAGACAAGCATTAGCCACTGAAGAGATCTCGTCAATACTGGCAAAACTTTCTGTAATGTCGCAAAAATTAGTTGAAGCGGCGGCGAGGGAGAAGACAGAAAAGATAATCAGCAGCGAGTTGAAGAAAGCAGCAAATAATCCCGAACTGCATCAAAGAGTCCAGGCCATCGCGCCTCTCAGTGGGGTGCATTCGGATGATAGCGCGCTTAGTACAGCTGATGACGATGATGATGTCATTGCTATGGATGACGAACCAACTTGTAGTACTTTTAACAGCAACGAACATGCATATTCATACAtCTCAAAAATCCGGCGGAAAACTCAATCGGATGACAACGGTGGCGATTCGGTTGGCTTATTATCGTCAAACGCGAGGTTACGTTTGGAGGAACTAATGATGGAGGGTGATTTGTTGGAAGTTGCCTTGGATGAGACGCAACATATCTGGCGTATCTTAAGTCACATGAATAGTCATAACACCATGCGAAAATATAAGTCATTTGAGGAGGTTCAAGTGAATGCCAATCAGGAGATGAAAGACATAAAAAAACGAGGAAGGAAGCGGAAAGAGGAATTcgaattgttgaaaaaaattggaCGGCagaaaatcgaagaaaaaaacatgGTTAAACATGAAGCGCaagagtactctgcgttgataccactgcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGTTGGTTCCATATGCATTGTGTTGGTTTGGATCGCACAGAAATCGCTGAGGAAGACGATTATATTTGTAGCAACTGTAAAGAAGTCGATCAAAATGCATCGCCCCAGGGGTACCACGGCAGCACCACTGACACTGAAGCGGGATTCTAG
- Protein Sequence
- MGSKSNCGNQRCVQDNMACDRAESDFEFTVPPEAPVFEPTNEEFHDPLAYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTKERRWAKIANKMGYPSGRSVGSILKNHYERILYPFDVFKQGKTLSDIKFEPDSDVNEKRDRDYKPHGIISRQQIKPPNEKFSRRSKRYSGQEEKQDVSIKQEDYKEECDSDNDCKDKVKNRHFSFDTDKSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGLKLVYDYDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKVGRECITHYSNLRRFCVFSHDELVCKMSLDPDLLDIGIATATYYDMLQMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHNSQLVCLRHFADLCTCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKNDKIELSELKELLNEAENKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKDAEELESKDEECDVEKLKKCIDFGDSIYIDLPQLVLLKQRLAQIQWLEEVKSLQDDPKAVSREEVAKLIEKGMTIPPHFSIENMLSELHALTKAIDKWEEKAKIFLHIKNRRTIASVEEFIREADEVEAYLPSLDNLQDTLNKAKNWTKLVDEIQAKENFPYYDTLDDLIRKGRNISLHLDALPMLESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKKHKGDESIGAVYVCDTKLDDSSDSANVVAAFKLAEQREMEAMRSLRERNLMKMKADVEDSKYCVCRRSRFGIMLQCELCKDWFHTNCVPLPKTSYKGKPPGPRDIKFLCPCCLRSRRPRLETILALLDRARQALATEEISSILAKLSVMSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSTADDDDDVIAMDDEPTCSTFNSNEHAYSYISKIRRKTQSDDNGGDSVGLLSSNARLRLEELMMEGDLLEVALDETQHIWRILSHMNSHNTMRKYKSFEEVQVNANQEMKDIKKRGRKRKEEFELLKKIGRQKIEEKNMVKHEAQEYSALIPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWFHMHCVGLDRTEIAEEDDYICSNCKEVDQNASPQGYHGSTTDTEAGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01270981;
- 90% Identity
- -
- 80% Identity
- -