Basic Information

Gene Symbol
KDM5A
Assembly
GCA_013373865.1
Location
JABXFI010000019.1:1578761-1591699[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-25 6.4e-22 78.5 0.0 2 89 104 187 103 187 0.94
2 2 4.3 1.9e+04 -3.1 0.1 49 81 817 847 814 850 0.61

Sequence Information

Coding Sequence
ATGGGATCGAGGAGCAACGAGGGCCGCGGTTGCGGGAACCGCGGCGCCCACGACGTGGCCTGCGACCGCACCGAGACCGACTTTGAGTTCACGGTGCCGCCGGAAGCGCCGGTGTTCGAGCCGACCAACGACGAGTTTCACGATCCTCTCGCCTACATCGCCAAGATACGGCCGATCGCCGAGAGATCCGGCATCTGCAAGATTAAACCGCCACCCAACTGGCAGCCACCATTTGCCGTCGACGTGGACAAGTTCAAATTTGTTCCGAGAATACAAAGGCTAAATGAATTAGAAGCCAAGACCAggataaaacttaattttttagatcaaATTGCAAAGTTTTGGGAGCTTCAAGGTTCGTCTTTGAAAATTCCACTTGTAGAACGTAAAGCACTGGACTTGTattctttacataaaattgttacagACGAagGTGGCATAGAAACTGTGACTAAAGAGAGAAGATGGGCAAAAATTGCCAATAAATTGGGTTACCCATCTGGACGAAGCGTAGGCAGCATATTGAAGAATCACTACGAGAGAATTTTATATCCCTTTGACGTTTTCAAACAAGGAAAGACATTGTCAGATATTAAATTTGAACCAGAATCGGACGGAAACGAGAAGAGAGACCGTGATTATAAGCCACATGGTATAATATCTCGACAACAAATTAAACCgccaaatgaaaaattttcacgaCGATCTAAGCGATATTCTGGGCAAGACGAGAAGCAAGATGTATCGATTAAACAAGAAGACTGTAAAGAGGAATGCGACTCGGACAATGAGTGCAAGGACAAAATTAAGAGTAGACATCTCAGTTGCGATATCGATAAGAGCAAAGAACTTAAgaagttacaattttatggACCAGGCCCGAAAATGGCGGGCTTTAATACCAAAGAGGCAAAGAAATCTAACAAAACTCGTGGTTTGAAGCTGGTTTACGACTTTGATCCTttggcaaaatatatttgtcacaATTGCGCAAGAGGCGACAATGAAGAAAACATGCTATTGTGTGACGGATGTGATGACAGCTATCATACATTTTGCCTTATGCCGCCATTGACGGAAATTCCAAAGGGCGACTGGCGATGTCCTAAGTGCGTCGCCGAAGAGGTCTCAAAACCTATGGAGGCGTTCGGTTTCGAACAAGCGCAGAGAGAATACACGCTGCAACAATTCGGAGAGATGGCCGATCAATTCAAAAGCGACTATTTTAATATGCCTGTGCatATGGTGCCGACATCACTAGTGGAAAAGGAGTTCTGGCGAATAGTCTCGTCCATTGACGAAGATGTCACTGTAGAATATGGCGCCGATTTGCATACGATGGATCATGGATCCGGATTTCCTACCAAGACAAGCGTTAATTTGTTCACTTGCGATCAAGAGTATGCCGAATCTTCGtggaatttaaataacttgcCGGTTTTACGTGGAAGCGTCCTTGGCCACATTAATGCTGATATTAGTGGCATGAAAGTTCCTTGGATGTACGTCGGCATGTGCTTCGCAACATTCTGTTGGCACAATGAGGATCATTGGAGCTAttccattaattatttacattggGGCGAACCAAAGACATGGTATGGTGTACCTGGTTCTCAGGCGGAACGTTTCGAGCAATCGATGAAGTCCGCCGCGCCAGAATTGTTTCACAGCCAGCCTGATTTATTGCATCAACTTGTTACCATTATGAATCCAAACATCTTAACAAGTGAAGGAGTACCAGTATTTAGAACAGATCAACACGCCGGTGAATTTGTCGTAACATTTCCCAGAGCTTATCATGCAGGCTTTAATCAGGGTTACAATTTTGCAGAAGCTGTAAATTTTGCACCTGCAGATTGGCTTAAAATTGGGCGAGAATGCATCACGCATTATTCCAACTTAAGAAGGTTCTGTGTATTTTCTCATGACGAGCTAGTTTGTAAAATGTCATTGGATCCAGATTCGTTAGATATCGGAGTCGCAACCGCCACGTATCACGACATGTTGCAAATGGTAGAGGATGAGAAGAAATTGCGGAAAAACTTACTAGAATggGGTGTGACAGAGGCAGAACGTGAGGCTTTTGAGCTTCTACCAGATGACGAGAGACAGTGCGAAGCATGCAAAACCACCTGTTTTCTCAGTGCAGTCACATGTTCGTGCCACAACTTGCAGTTAGTTTGTTTGAGACACTTTGCTGATTTATGCTCCTGCCCACCAGAGAAGCATACGTTACGTTATCGATATACATTGGATGAGCTGCCAATCAtgctgcaaaaattaaaactgaagGCCGAATCATTTGATTCGTGGGTGGCCAAGGTGAAGGAAGCGATGGATCctaaaaacgataaaattgaattaaatgacTTGAAAGAACTCCTAAATGAAGCTGAAAACAAAAAGTTCCCTGAAAGTGAACTACTGACAGCTTTAACAACAGCTGTGCAAGATGCCGAGAAATGCGCCAGCGTTGCACAACAgctattaaacaataaacaacGCACGAGgACTAGACAAACAGTTGATACCAAGTATAAACTTACAGTAGAAGAATTGACACTTTTTTATAAGGAAATAACTAATTTGTGCTGTGAACTTAAGGAATCGGATGGTGTCAAATTTATACTTGATCAagtattacaatttcaaaagGATGCAGCAGAATTGGAATCCAAGGACGATGATTGCGACGTAGAGAAATTGGAGAAATGCATTGATTTTGGTGACTCTATCTGCATTGAATTACCTCAACTAGTACGATTGAAACAAaaactgGCACAGATCCAGTGGCTAGAAGAAGTAAAATCCCTTCAAGATGATCCGAAGTCTGTTAGTCGCGAAGAAATAGTAAAGTTAATCGAGAAAGGCATGACGATACCACCTCATGTCAGTATCGAAAGTACACTGTCAGAATTGCACGCGTTAACGAAAGCAATTGATAAGTGGGAAGAGAAGGCCAAGGTGTTTCTTAATACCAAAAATAGACGAACCATCGCGGCTGTGGAGGAATTTATTCGTGAGGCAGAGGAGGTTGAGGCGTATTTGCCGAGTTTGGATACTCTTcaagatatacttaataaagCAAAGAATTGGACGAAACTGATTGATGATATACGGTCAAGAGAAAATCTTCCCTATTATGATACTATGGACGATTTATTAAGGAAAGGAAGAAACATTCCTTTGCATCTAAACGACCTTCCAACGTTGGAATCTACCCTCTCGCAGGCAAAAGCTTGGAAAGAAAGGACCGCGAGAACATTCTTAAGAAAAAACTCTCACTATACGCTAATGGAAGCTCTATCGCCGCGAATTGGCGTCGGCGTACAGGCAATGAAAACTAAGAAGAACAAAGGCGACGAATCCATAGGTGCCGTTTATGTCTGTGATACAAAGTTGGACGATTCCAGCGACTCGGCAAATGTGGTAGCTGCTTTCAAGCTAGCAGAACAGCGCGAAATGGAGGCGATGAGAAgtttgagagaaagaaacttGATGAAGATGAAAGCAGAAGCAGAAGATTCCAAGTATTGCGTTTGCCGGCGACCAAAATTCGGTACTATGCTCCAATGCGAGCTTTGCAAGGACTGGTTTCACAtaAACTGTGTGCCTTTGCCCAAAACATCGTACAAAGGTAAACCAACGTCGAAGGATATGAAGTTTTTATGTCCATGTTGTTTACGTTCTCGACGACCTCGTTTGGAAACTATATTGGCTCTCTTAGTGAGTCTCCAAAAAATTCCGATCCGGGTTCCGGAAGGAGAAGCGTTGCAATGTCTAACGGAACGCGCGATGAATTGGCAGgaTCGAGCGAGGAAAGCATTAGCTACGGACGAACTCTCATCGATATTGGCGAAACTTTCTGTAATGTCGCAAAAGTTAGTTGAAGCTGCGGCAAGGGAGAAGACGGAAAAGATCATCACTAGCGAGCTGAAAAAGGCAGCAAATAATCCCGAACTTCATCAGAGAGTACAGGCTATTGCGCCTCTCAGCGGAGTGCATTCGGACGATAGCACGCCTAGTACTGCTgatGATGATGACGATATCGTTGCTCTGGATGAGGAACCAACATGTAGTACTTTTAATAGTAATGAGCACGCATATTCCTATAtctcGAAAATTCGACGAAAAACTCAGTCGAGTGACAGTGAGTCATTTGGCATGTTATCTTCGAGTACGAGATCGCGTTTGGAAGAACTTATGATGGAAGGGGACTTGTTAGAAGTCGCATTGGACGAAACACAGCACATTTGGCGCATATTGAGTTACATGAATAATCATAATACTATGCGAAAATACAAGTCACTTGAAGAAGTCCAAGCGAATATCGATCAAGAAATGAAGGACGTGAAGAAACGGGGTAGGAAGAGAAAATCGGAGGAATTTGAATTACTTAAGAAAATCGGACGCCAAAAGGCTGAGGAAAAAAATGTGGTTAAACGCAGCAAAAGCGGCGGTCCTGTCGCTAAAGAAAAGAGACAAAGCAGTTCGCCGGTTCCCATAAAACGTGGACCTCGAAAGATGAAACGTAAGAGCGAGGGTGAAGAAAGTCCTAGGAAGCGAGGCGGTAATCGTACGAAGAAGACTAAGCAAGAAAGTTCGGACGAAGAGGATGATTGCGCAGCGGTTAACTGTTTGCGGCCTAGTGgTAAAGAAGTTGATTGGGTTCAGTGTGATGGTGGCTGCGAAGGTTGGTTCCATATGCATTGTGTTGGATTGGATCGTACAGAAATTGCGGAGGAAGATGATTATATTTGTAGCAACTGTAAAGAAGCCGATCAAAGTGCATCGTCGAGATCCGCGCCAGATCCGGCTGAATCATTAGGTCTGGATGCacttctttccctttctcaGCCCCAGGAGTACCATGGCAGCACCACCGACACGGAAGCGGGTGTCTAG
Protein Sequence
MGSRSNEGRGCGNRGAHDVACDRTETDFEFTVPPEAPVFEPTNDEFHDPLAYIAKIRPIAERSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLSDIKFEPESDGNEKRDRDYKPHGIISRQQIKPPNEKFSRRSKRYSGQDEKQDVSIKQEDCKEECDSDNECKDKIKSRHLSCDIDKSKELKKLQFYGPGPKMAGFNTKEAKKSNKTRGLKLVYDFDPLAKYICHNCARGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEQSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGVATATYHDMLQMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHNLQLVCLRHFADLCSCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVAKVKEAMDPKNDKIELNDLKELLNEAENKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQTVDTKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKDAAELESKDDDCDVEKLEKCIDFGDSICIELPQLVRLKQKLAQIQWLEEVKSLQDDPKSVSREEIVKLIEKGMTIPPHVSIESTLSELHALTKAIDKWEEKAKVFLNTKNRRTIAAVEEFIREAEEVEAYLPSLDTLQDILNKAKNWTKLIDDIRSRENLPYYDTMDDLLRKGRNIPLHLNDLPTLESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKKNKGDESIGAVYVCDTKLDDSSDSANVVAAFKLAEQREMEAMRSLRERNLMKMKAEAEDSKYCVCRRPKFGTMLQCELCKDWFHINCVPLPKTSYKGKPTSKDMKFLCPCCLRSRRPRLETILALLVSLQKIPIRVPEGEALQCLTERAMNWQDRARKALATDELSSILAKLSVMSQKLVEAAAREKTEKIITSELKKAANNPELHQRVQAIAPLSGVHSDDSTPSTADDDDDIVALDEEPTCSTFNSNEHAYSYISKIRRKTQSSDSESFGMLSSSTRSRLEELMMEGDLLEVALDETQHIWRILSYMNNHNTMRKYKSLEEVQANIDQEMKDVKKRGRKRKSEEFELLKKIGRQKAEEKNVVKRSKSGGPVAKEKRQSSSPVPIKRGPRKMKRKSEGEESPRKRGGNRTKKTKQESSDEEDDCAAVNCLRPSGKEVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEADQSASSRSAPDPAESLGLDALLSLSQPQEYHGSTTDTEAGV