Pbar010531.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- Kdm5a
- Assembly
- GCA_000187915.1
- Location
- NW:38270-56933[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-25 2.2e-22 78.5 0.0 2 89 105 188 104 188 0.94 2 2 4 6.1e+03 -3.0 0.1 49 81 818 848 815 852 0.63
Sequence Information
- Coding Sequence
- ATGGGATCGAGAAGCAACGAGACTCGTAGCTGTGGGAATCACCGTTGCGCCCAAGACATGGCTTGCGACCGCGCCGAAACCGACTTTGAGTTTACGGTACCGCCGGAGGCACCGGTGTTTGAGCCAAGTAACGACGAGTTTCACGACCCCCTCGCTTACATCGCCAAGATACGGCCGATCGCCGAGAGGTCTGGCATCTGCAAGATCAAACCACCACCCAATTGGCAGCCACCGTTTGCCGTGGATGTGGACAAGTTCAAATTTGTTCCGAGAATACAAAGGTTAAATGAATTAGAAGCCAAGACCAGGATAAAGCTTAATTTCTTAGATCAAATCGCAAAATTCTGGGAGCTTCAAGGTTCCTCCTTAAAGATCCCACTTGTAGAACGTAAGGCACTGGACTTGTATTCCTTACATAAAATAGTCACGGATGAAGGTGGTATAGAAACTGTGACTAAAGAAAGAAGATGGGCAAAAATCGCTAATAAACTGGGTTACCCATCTGGACGAAGCGTAGGCAGCATATTGAAGAATCACTATGAGAGAATTTTATATCCCTTCGACGTTTTCAAACAAGGAAAGACATTGTCAGATATCAAAATTGAACCAGACTCGGATGTAAATGAGAAGAGGGATCGCGATTATAAACCACATGGCATAATATCTCGACAGCAAATTAAACCACCAAACGAGAAATTTTCAAGGCGATCTAAGCGATTCTCAGGGCAAGAAGAGAAGCAAGATGTATCAATCAAACAGGAGGATTGCAAGGAGGAATGCGACTCGGATAACGAATGCAAGGATAAGGTTAAAAGCAGGCATCTTGGTTGTGATACAGATAAAAGCAAAGAACttaagaaattacaattttacgGACCAGGCCCGAAAATGGCCGGTTTTAATACcaaagagggaaaaaaatcCAATAAAACGCGCGGCTTGAAACTCGTTTATGACTTTGATcccTTGGCAAAATATATCTGTCACAATTGCGGGAGAGGcgataatgaagaaaatatgttGTTGTGTGACGGTTGCGATGACAGTTATCACACATTTTGCCTTATGCCACCATTGACGGAAATACCAAAAGGTGACTGGCGATGTCCCAAGTGTGTCGCGGAAGAGGTTTCAAAGCCGATGGAAGCATTCGGCTTTGAACAAGCACAGAGAGAATACACGTTGCAGCAGTTTGGAGAAATGGCCGATCAATTCAAAAGCGACTACTTTAATATGCCTGTACATatGGTCCCAACATCGCTAGTAGAAAAGGAATTTTGGCGAATAGTCTCGTCCATCGACGAAGATGTAACTGTAGAATACGGTGCCGATTTGCATACGATGGATCATGGGTCCGGATTTCCAACTAAAACCAGCGTTAATTTATTCACTTGCGATCAAGAGTATGCCGAATCTTCATggaatctaaataatttaccaGTCTTACGTGGAAGCGTTCTAGGCCACATTAATGCCGATATCAGTGGCATGAAAGTTCCTTGGATGTACGTTGGCATGTGCTTCGCGACATTTTGCTGGCACAACGAGGATCATTGGAGTTATTCCATTAATTATCTACACTGGGGCGAACCAAAGACGTGGTATGGTGTGCCGGGGTCTCAAGCGGAACGCTTTGAACAATCCATGAAATCCGCCGCACCGGAGCTGTTTCATAGTCAGCCCGATCTGTTACATCAACTTGTCACTATCATGAATCCAAACATATTAACGAGCGAAGGAGTACCGGTCTTTAGAACGGATCAACACGCGGGTGAATTTGTCGTAACATTTCCGAGAGCGTATCACGCAGGCTTTAATCAAGGTTACAATTTTGCAGAAGCTGTCAATTTTGCACCTGCAGATTGGCTTAAAATCGGACGAGAATGCATCAcacattattcaaatttaaggAGATTCTGTGTGTTTTCTCACGACGAACTAGTTTGTAAGATGTCACTAGATCCGGATTCATTAGATATTGGAGTCGCAACCGCCACGTATCATGATATGTTGCAAATGGTGGAGGATGAGAAGAAATTACGAAAAAACTTGCTAGAATGGGGTGTGACAGAGGCGGAACGTGAGGCTTTCGAGCTTCTACCAGATGACGAGAGACAATGTGAAGCATGCAAGACTACCTGTTTCCTGAGTGCGGTTACATGTTCGTGCCACAGCTCGCAGTTAGTTTGTCTCAGACATTTTGCTGATTTGTGTACCTGTCCACCAGAAAAGCATACGCTGCGTTACCGATATACATTGGACGAGTTACCAATCATGctgcaaaaattgaaattgaaagcTGAGTCATTTGACTCATGGGTGACTAAAGTAAAGGAGGCGATGGATCCTAAAAACGACAAAATTGAACTAAGTGAATTAAAAGAACTTTTGAATGAAGCTGAGAACAAGAAATTTCCAGAGAGCGAACTGCTAACGGCTTTAACAACCGCTGTGCAAGATGCCGAGAAATGCGCGAGTGTTGCACAACAGctattaaacaataaacaacGTACAAGaaCTAGGCAAACAGTTGATACCAAGTATAAACTTACTGTAGAAGAATTGACACTtttctataaagaaataacCAATTTGTATTGTGAACTTAAGGAATCGGATGGCGTAAAGTTTATACTCGATCAAGTATTACAATTCCAAAAAGACGCAGCAGAATTGGAATCCAAAGAAGATGATTGCGACATTGAGAAATTAGAGAAATGTATCGACTTTGGTGATTCTATCTGTATTGAATTGCCTCAGTTAGTTCGGTTGAAACAAagacTAGCACAGATGCAATGGCTAGAAGAAGTGAAATCCCTCCAAGATGATCCAAAATCTGTCAGTCGCGAAGAAGTAGCCAAATTGATCGAAAAAGGAATGACAATACCACCTCATTTTAGTATCGAAAATACATTGTCAGAGTTGCACGCGTTAACGAAGGCGATCGATAAATGGGAAGAAAAAGCTAAAGTATTTCTGAATACCAAAAATAGACGAACTATCGCGGCCGTAGAAGAATTTATTCGCGAAGCAGACGAAGTTGAGGCGTATTTGCCGAGTTTGGATACTCTTCAAGATATATTGAACAAAGCAAAGAATTGGACTAAACTGATCGACGACATACAGGCGAGAGAAATCTTTCCGTACTATGACACTTTGGATGATTTGTTAAGAAAGGGAAGAAATATCCCTTTGCATCTAGATGCTCTTCCAATGTTGGAATCTACTCTCTCGCAAGCGAAAACATGGAAAGAAAGAACCGCAAGGACATTTCTAAGGAAAAACTCGCATTATACGCTGATGGAAGCTCTGTCGCCGCGAATCGGCGTTGGCGTACAAGCGATGAAAACTAAGAAGAATAAAGGCGATGAGTCTGTAGGTGCCGTTTATGTCTGTGATACGAAATTGGACGATTCTAGCAATTCAGCGAACGTAGTAGCTGCGTTTAAGCTAGCGGAACAGCGTGAAATGGAGGCGATGAGAAgtttaagagaaagaaacttgATGAAGATGAAGGCAGAAGTAGAAGATTCGAAGTATTGTGTTTGCCGGCGACCAAGATTCGGCATTATGCTCCAGTGTGAACTTTGCAAAGATTGGTTTCATAcAAATTGTGTGCCTTTGCCTAAAACATCATACAAAGGTAAACCACCAGGGCCAAGAGACATGAAATTTTTGTGTCCGTGTTGTTTACGTTCTCGAAGACCACGTTTGGAAACTATATTGGCTCTCTTAGTAAGCCTTCAAAAAATTCCGATTCGATTGCCAGAGGGAGAAGCGTTACAATGTTTAACAGAACGTGCGATGAATTGGCAGgATCGAGCGAGACAAGCATTGGCTACCGAAGAGATCTCGTCGATACTAGCGAAACTTTCAGTAATGTCACAAAAATTAGTGGAAGCTGCGGCGAgagaaaaaacagaaaagatTATCAGCAGCGAGTTGAAAAAGGCAGCTAATAATCCCGAACTGCATCAGAGAGTGCAGGCTATCGCTCCTCTTAGTGGAGTGCATTCGGATGATAGCACACTTAGTACTGCTgatgacgatgacgatgttGTTACCTTGGATGATGAACCAACATGCAGTACTTTTAATAGCAACGAACATGCATATTCATATATCTCGAAAATTCGACGAAAAACTCAAACAAATGACAGCGAGTTATGTGGCATATTATCTTCTAATGCGAGATCACGTTTGGAAGAACTTATGATGGAAGGCGATTTATTAGAAGTGGCATTGGATGAAACGCAACACATATGGCGTATCTTGAGTCATATGAATAGTCACAACACTATGCGGAAATACAAGTCATTCGAAGAAGTCCAAGCGAATATCAATCAGGAGATAAAGGACGTGAAAAAACGAGGTAGAAAAAGGAAATCAGAGGATTttgaattacttaaaaaaatgggACGGCAGAAAATCGATGAGAAAAACATAGTTAAACGTAGCAAAAGCGGTGGTCCTATCACTATCAAGGAAAAGAGGCAGAGCAGTTCGCCGATTCCCGTAAAACGTGGACCTCGAAAGATGAAACGTAAGAGTGAGGGCGAAGAAGGTCCTAGAAAGCGAGGCGGTAATCGCACAAAGAAGACCAAGCAAGAAAGTTCGGACGAAGACGACGATTGTGCGGCGGTTAATTGCCTGCGGCCTAGTGGTAAGGAAGTTGATTGGGTTCAGTGTGATGGTGGCTGCGAAGGTTGGTTCCATATGCATTGTGTTGGATTGGATCGTACAGAAATTGCGGAAGAAGACGATTATATTTGTAGCAACTGTAAAGAAGCCGATCAAAATGCATCGtcGAGATCCGCGCCAGATCCGGCTGAATCATTAGGCCTGGATGCActtctttccctttctcaGCCTCAGGGATACCACGGCAGCACCACCGACACAGAAGCGGGTGTCTAG
- Protein Sequence
- MGSRSNETRSCGNHRCAQDMACDRAETDFEFTVPPEAPVFEPSNDEFHDPLAYIAKIRPIAERSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLSDIKIEPDSDVNEKRDRDYKPHGIISRQQIKPPNEKFSRRSKRFSGQEEKQDVSIKQEDCKEECDSDNECKDKVKSRHLGCDTDKSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGLKLVYDFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEQSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGVATATYHDMLQMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFADLCTCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKNDKIELSELKELLNEAENKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQTVDTKYKLTVEELTLFYKEITNLYCELKESDGVKFILDQVLQFQKDAAELESKEDDCDIEKLEKCIDFGDSICIELPQLVRLKQRLAQMQWLEEVKSLQDDPKSVSREEVAKLIEKGMTIPPHFSIENTLSELHALTKAIDKWEEKAKVFLNTKNRRTIAAVEEFIREADEVEAYLPSLDTLQDILNKAKNWTKLIDDIQAREIFPYYDTLDDLLRKGRNIPLHLDALPMLESTLSQAKTWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKKNKGDESVGAVYVCDTKLDDSSNSANVVAAFKLAEQREMEAMRSLRERNLMKMKAEVEDSKYCVCRRPRFGIMLQCELCKDWFHTNCVPLPKTSYKGKPPGPRDMKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATEEISSILAKLSVMSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSTLSTADDDDDVVTLDDEPTCSTFNSNEHAYSYISKIRRKTQTNDSELCGILSSNARSRLEELMMEGDLLEVALDETQHIWRILSHMNSHNTMRKYKSFEEVQANINQEIKDVKKRGRKRKSEDFELLKKMGRQKIDEKNIVKRSKSGGPITIKEKRQSSSPIPVKRGPRKMKRKSEGEEGPRKRGGNRTKKTKQESSDEDDDCAAVNCLRPSGKEVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEADQNASSRSAPDPAESLGLDALLSLSQPQGYHGSTTDTEAGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01270981;
- 90% Identity
- iTF_01015594;
- 80% Identity
- -