Basic Information

Gene Symbol
KDM5A
Assembly
GCA_017607565.1
Location
JAANIB010003364.1:44913-58648[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8e-10 1e-06 28.1 0.0 2 44 108 149 107 152 0.93
2 3 9.4e-12 1.2e-08 34.3 0.0 40 89 170 216 162 216 0.85
3 3 4 5.2e+03 -3.0 0.1 49 81 823 853 820 857 0.63

Sequence Information

Coding Sequence
ATGGGCTCGAAAAGCCTCGAGAATCGTCCCTGTGGAAATGGGAATCAACCACGTTGTGCCCAAGATATGGCTTGCGACCGCACCGAGACTGACTTTGAGTTCACGGTGCCGCCGGAAGCACCGGTGTTTGAGCCGACCAACGAGGAGTTCCACGATCCTCTCGCCTACATCGCCAAGATACGACCGATCGCCGAGAGGTCCGGCATCTGCAAGATTAAACCGCCACCCAACTGGCAGCCACCATTTGCCGTGGACGTAGACAAGTTCAAATTTGTTCCGAGAATACAAAGGTTAAATGAATTAGAAGCCAAAACCAGGAtaaagcttaattttttagatcaaATTGCAAAGTTTTGGGAACTTCAAGGTTCCTCTTTGAAAATTCCGCTGGTGGAACGTAAGGCTCTGGACTTGTATTCCTTACACAAAATAGTCACGGACGAAggtaagttttatttatacatattttatttattccgcactttatattatacatttaatttctacGTGTTATTTATAGGCGGTATAGAAACTGTGACTAAGGAAAGAAGATGGGCAAAAATTGCCAATAAACTGGGTTATCCATCTGGACGAAGTGTAGGCAGCATATTGAAGAATCActatgaaagaattttatatccCTTTGACGTTTTTAAGCAAGGAAAGACATTGTCAGATATTAAAATTGAACCGGACTCGGATGTTAATGAGAAGAAAGATCGTGATTATAAGCCACATGGTATAATATCTCGGCAGCAAATTAAACCACCGAATGAAAAATTCTCGCGACGGTCTAAGCGATTTTCCGGGCAAGAAGAGAAGCAAGATATATCGATTAAACAGGAAGATTGCAAGGAGGAATGTGACTCAGACAATGAGTGCAAGGACAAGATTAAGAGCAGATATTTCAGTAGCGATGTGGATAAAAGCAaagaacttaaaaaattacaattttacggACCAGGCCCGAAAATGGCCGGCTTTAATACCAAAGAGgcaaaaaaatctaataaaacgCGTGGCTTGAAACTCGTTTACGACTTTGATCCTttggcaaaatatatttgtcacAATTGCGGGAGAGGCgacaatgaagaaaatatgttgTTATGTGATGGATGTGATGACAGTTATCATACGTTTTGCCTTATGCCACCATTGACGGAAATACCAAAGGGAGACTGGCGATGTCCCAAGTGCGTTGCCGAAGAGGTCTCGAAGCCAATGGAGGCATTTGGTTTCGAACAAGCGCAAAGAGAATACACGCTGCAGCAATTCGGAGAAATGGCCGATCAATTCAAGAGCGACTACTTTAATATGCCTGTGCATGTAAAATATGGTGCCGATTTGCATACGATGGATCATGGATCTGGATTTCCAACCAAAACCAGCGTTAATTTATTCACTTGTGATCAAGAGTATGCTGAATCTTCGTggaatttgaataatttgccAGTTCTACATGGAAGCGTTCTGGGTCATATCAATGCTGACATTAGTGGCATGAAAGTTCCTTGGATGTATGTCGGCATGTGCTTCGCAACATTTTGTTGGCACAATGAAGATCATTGGAgctattctattaattatctaCATTGGGGCGAACCAAAGACATGGTATGGAGTACCAGGTTCTCAGGCAGAACGCTTCGAACAATCCATGAAGTCCGCCGCTCCAGAACTGTTTCATAGCCAGCCCGATTTGTTGCATCAACTTGTTACTATCATGAATCCAAACATATTGACAAGTGAAGgAGTACCAGTATTTAGGACAGATCAACATGCAGGtgaatttgtcgtgacatttcCGAGAGCATACCACGCAGGTTTTAATCAGGGTTACAATTTTGCAGAAGCTGTCAATTTTGCACCCGCAGATTggCTTAAGATTGGACGAGATTGCATCACgcattattcaaatttaagaaGATTCTGTGTGTTTTCCCACGATGAGCTAGTTTGTAAAATGTCATTGGATCCAGATTCGTTAGATATCGGAGTCGCAACTGCCACGTATCACGATATGTTGCAAATGGTGGAGGATGAGAAAAAATTACGGAAAAACTTGCTAGAATGGGGCGTGACTGAGGCAGAACGCGAGGCTTTCGAGCTTCTACCGGATGACGAGAGACAGTGCGAAGCATGCAAGACTACCTGTTTTTTGAGTGCAGTTACATGTTCGTGCCACAGCTCGCAGTTAGTTTGTCTGAGGCACTTTGCTGATTTGTGTACGTGTCCACCAGAAAAGCATACGCTGCGTTATCGATATACGTTAGACGAATTACCTATCatgttgcaaaaattaaaattgaaagccGAGTCGTTTGATTCATGGGTGGCCAAAGTGAGAGAAGCGATGGATCCTAAGAacgataaaattgaattaaacgaGTTGAAAGAACTTCTGAATGAAGCTGAGAACAAAAAATTCCCCGAAAGTGAGCTATTGACGGCTTTAACAACCGCTGTGCAAGATGCTGAGAAATGCGCAAGCGTTGCACAACAGctattaaacaataaacaaCGTACAAGaactaGGCAGACAGTTGATACCAAGTATAAACTCACTGTTGAAGAATTAACACTTTTTTACAAGGAAATAACCAACCTATACTGTGAACTTAAGGAATCAGATggtgtaaaatttatacttgATCAAGTATTACAATTTCAAAAGGATGCGGAAGAATTGGAGTCCAAAGAAGATTGCGACATTGAGAAATTAGAGAAATGCATTGATTTTGGTGATTCTATCTGCATTGAATTACCTCAACTAGTACGATTGAAACAAaaattgaCACAAATACAGTGGCTAGATGAAGTAAAATCTCTTCAAGATGATCCGAAATCTGTTAGTCGCGAAGAGATGATTAAGTTAATCGAAAAAGGCATGACAATACCACCTCATGTCAGTATTGAAAATACATTGTCAGAATTGCACGCGTTAACAAAGGCAATCGATAAGTGGGAAGAGAAGGCCAAAGGGTTTCTTAACACCAAAAATAGACGAACCATTGCAGCTGTAGAGGAATTTATTCACGAAGCAGATAAAGTTGAAGCGTATTTACCGAGTTTGGATACTCTTCAAGATATATTGAACAAAGCAAAGAATTGGACGAAATTGTTTGATGATATACGAGCGAGAGAAAACTTTCCTTATTACGATACATTGGATGACTTGTTAAGAAAGGGAAGAAATATCCCTTTGCATCTAAATGATCTTCCAACGTTGGAATCTACTCTCTTGGAGGCGAAAACATGGAAAGAAAGGACCGCGAGAACTTTTTTGAGGAAAAATTCGCACTATACGCTGATGGAAGCTCTGTCGCCGCGAATCGGCGTCGGCGTACAGGCAATGAAAACTAAAAAGAACAAGGGCGACGAATCCGTAGGTGCCGTTTGTGTATGTGATACAAAATTGGACGACTCCAGCGACTCGGCGAACGTGGTAGCTGCCTTCAAACTTGCAGAACAACGCGAAATGGAAGCGATGAGAAgcttgagagagagaaatttaatGAAGATGAAAGCAGAAGCGGAAGATTCCAAGTATTGTGTTTGTCGGCGGCCGAGATTCGGCATTATGCTTCAGTGCGAGCTTTGCAAGGATTGGTTTCACAcaaACTGTGTACCTTTGTCTAAGACACTGTACAAAGGTAAATCGCCAGGGCCGAAGgatatgaaatttttgtgTCCATGCTGTCAACGTTCTCGACGACCTCGTCTGGAAACTATATTGGCTCTCTTAGTAAGTCTTCAAAAAATTCCGATCCGATTGCCGGAGGGAGAAGCGTTACAGTGCTTAACTGAACGTGCGATGAATTGGCAGGATCGAGCGAGAAAAGCATTGTCTACCGACGAAGTTTCATCGATACTGACAAAACTTTCTGTAATGTCGCAAAAGTTAGTGGAAGCTGCGGCAAGGGAGAAAACGGAAAAAATTATCAGCAGCGAGTTGAAAAAGGCAGCGAATAATCCTGAATTGCATCAAAGAGTGCAAGCTATCGCGCCCCTCAGCGGAGTACATTCGGATGATAGCACGCCTAGTACTGCTgatgacgatgacgatgttATTACTCTGGATGATGAACCAACATGTAGTACTTTCAATAGTAACGAACACGCATATTCATACATCTCGAAAATTCGGCGGAAAACTCAATTGAGTGACAATGAGTCATTCGGCACATTATCTTCAAACACGAGGTCACGTTTGGAAGAACTTATGATGGAAGGTGACCTATTAGAAGTTGCCTTAGACGAAACACAACACATTTGGCGTATATTGAGTTACATGAATAGCCACAATACCATGCGGAAATACAAATCGCTTGAGGAAGTTCAAGCAAATCAGGAGATGAAAGATGTGAAGAAACGGGGTAGAAAGAGGAAATCGGAGGAGTttgaattacataaaaaagttGGACGTCAAAAAGTTGAAGAGAAAAACGTAATTAAACGTAGCAAAAGCAGCGGCCCTATCATTAAGGAGAAGAGGCAGAGCAGTTCACCAGTTCCTAAACGTGGACCTCGAAAGATGAAACGCAAAAGTGAAGGTGAGGAAAGCCCTAGAAAGCGAGGTGGTAATCGCACAAAGAAGACTAAGCAAGAAAGTTCGGATGAGGAGGATGATTGCGCGGCGGTTAACTGCTTACGGCCTAGTGgTAAGGAAGTTGATTGGGTTCAGTGTGATGGTGGCTGCGAAGGTTGGTTCCATATGCATTGTGTCGGATTGGATCGTACAGAAATTGCGGAGGAAGATGATTATATTTGTAGCAACTGTAAAGAAGCCGATCAAAGTGCATCGTCGAGATCCGCGCCAGATTCAGTTGAATCATTAGGCCTGGATGCACTTTTTTCCCTTTCTCAGTCCCAGGAGTACCATGGCAGTACCACTGACACGGAAGCTGGTGTC
Protein Sequence
MGSKSLENRPCGNGNQPRCAQDMACDRTETDFEFTVPPEAPVFEPTNEEFHDPLAYIAKIRPIAERSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGKFYLYIFYLFRTLYYTFNFYVLFIGGIETVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLSDIKIEPDSDVNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFSGQEEKQDISIKQEDCKEECDSDNECKDKIKSRYFSSDVDKSKELKKLQFYGPGPKMAGFNTKEAKKSNKTRGLKLVYDFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHVKYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLHGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEQSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRDCITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGVATATYHDMLQMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFADLCTCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVAKVREAMDPKNDKIELNELKELLNEAENKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQTVDTKYKLTVEELTLFYKEITNLYCELKESDGVKFILDQVLQFQKDAEELESKEDCDIEKLEKCIDFGDSICIELPQLVRLKQKLTQIQWLDEVKSLQDDPKSVSREEMIKLIEKGMTIPPHVSIENTLSELHALTKAIDKWEEKAKGFLNTKNRRTIAAVEEFIHEADKVEAYLPSLDTLQDILNKAKNWTKLFDDIRARENFPYYDTLDDLLRKGRNIPLHLNDLPTLESTLLEAKTWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKKNKGDESVGAVCVCDTKLDDSSDSANVVAAFKLAEQREMEAMRSLRERNLMKMKAEAEDSKYCVCRRPRFGIMLQCELCKDWFHTNCVPLSKTLYKGKSPGPKDMKFLCPCCQRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARKALSTDEVSSILTKLSVMSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSTPSTADDDDDVITLDDEPTCSTFNSNEHAYSYISKIRRKTQLSDNESFGTLSSNTRSRLEELMMEGDLLEVALDETQHIWRILSYMNSHNTMRKYKSLEEVQANQEMKDVKKRGRKRKSEEFELHKKVGRQKVEEKNVIKRSKSSGPIIKEKRQSSSPVPKRGPRKMKRKSEGEESPRKRGGNRTKKTKQESSDEEDDCAAVNCLRPSGKEVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEADQSASSRSAPDSVESLGLDALFSLSQSQEYHGSTTDTEAGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01270981;
90% Identity
iTF_01015594;
80% Identity
-