Pnig019487.1
Basic Information
- Insect
- Pentalonia nigronervosa
- Gene Symbol
- Rcor2
- Assembly
- GCA_014851325.1
- Location
- scaffold:33879-41131[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-06 0.0018 18.9 0.0 3 46 125 168 123 168 0.95 2 2 2.1e-10 2.8e-07 31.1 0.0 3 45 352 394 351 395 0.95
Sequence Information
- Coding Sequence
- ATGGCTAACGATAATTTGGAAGATTTGAAAAATAGCAAACGACCAACACCGTCTGCAAATGCTGAAACGATGAATTTAAACGATCTCATTCAAGAAAACGCCGAAAAAATCAGAGTGGGACGTGATTACCAGGCCGTCATTCCAAAACTATTGGTACTCCCAAAAAATAGACGTGAACGACTGAACAAAAAAGCGCTATTAGTTTGGTCTCCAACCGATACCATTTCAGAAATTAAATTAAATGAGTACATATTATTATCAAAAGAAAAATATGGTTACAATAGTGAACAGGCATTGGGCATGCTATACTGGCATCATCACGACATGGAAAAGGCTCTTAGTGATCTTTCAAATTTTGCACCTCAACCAGATGATTGGTCTACCGATGATAAGGTTACATTTGAATCAGCCTTTAATAGCATTGGAAAGAATTTTTTACGCATAAAACAAATGATGCCTGATAAACCAATAGCATCATTAGTCAAATATTACTATCTATGGAAAAATAAGAGAAAGAAGAGCAGTGTTATAGACCGACAAGCTAAAAAATTAGCAAATGTCCGTGCAAATGAGAATCATAATGGAAGTAGAGAAGGGTCCAGTTCAGCAGAGTCTGAACCTGATGACAAGAAGGACCCTGGGGAAGGAAGTTCAAAACAGTCTTGTTCAGTTTGTGGAGTTTTTGTTACTACGCTTCATTCTACCCAAAAAGGATCAATGTGTGGCACATGTCATACACATTTCAGGAGGACTAATGGTGGTATTAGACCAACGCTAGGTCCACCACGTCCAAACAATCGCCATTTAAACATAGCTCGTAATAAGCGTTTACCACCACGAGGTATGTATGTTAATCATGATGATCTTCAATCTATTGCATCTGAATCCAGTGGACAAGAAGACACTATTTTATTGACTATGGATGATGAGGTTGTATCATTAAAATGCAAAATACAGTCTAACAGACAAGATATTGGACATGCGCAAAAGAAGCTTAAATTAGATGTTAGTGAATATAGAAACTATGAACCCACTACAAGTCGTGTTATTTCTCGTTGGAGCAATGATGAAGTTATGCTTGCTATTCAAGGAATGCGCAAATATGGAAAAGATTTCAAAGCCATTGCTGAAACAATGGGAACAAAGACTCAAACCCATTTGAAATCATTTTATTCTCATTATCGTAAGCGTTATAAACTAGATACAATACTCAAAAAGTATGATGCTGACCAAAATACAATGATAATTGAGCTTAGTGATGATGAAGATGAACCGGTTATCAGAAAAGATGAACCTTTGTCTACAATAACAAGACAGAATACATCATCAGCTTTGGCTTCTGGAACTCGGCTTATTAGTAATCTTACATTGAACTCCAAAGCACATCAAACGGCTGCTGCTGCAAAGTGA
- Protein Sequence
- MANDNLEDLKNSKRPTPSANAETMNLNDLIQENAEKIRVGRDYQAVIPKLLVLPKNRRERLNKKALLVWSPTDTISEIKLNEYILLSKEKYGYNSEQALGMLYWHHHDMEKALSDLSNFAPQPDDWSTDDKVTFESAFNSIGKNFLRIKQMMPDKPIASLVKYYYLWKNKRKKSSVIDRQAKKLANVRANENHNGSREGSSSAESEPDDKKDPGEGSSKQSCSVCGVFVTTLHSTQKGSMCGTCHTHFRRTNGGIRPTLGPPRPNNRHLNIARNKRLPPRGMYVNHDDLQSIASESSGQEDTILLTMDDEVVSLKCKIQSNRQDIGHAQKKLKLDVSEYRNYEPTTSRVISRWSNDEVMLAIQGMRKYGKDFKAIAETMGTKTQTHLKSFYSHYRKRYKLDTILKKYDADQNTMIIELSDDEDEPVIRKDEPLSTITRQNTSSALASGTRLISNLTLNSKAHQTAAAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01304110; iTF_01305485; iTF_00972978; iTF_01330487; iTF_00308767; iTF_00134202; iTF_00135252; iTF_00136068; iTF_01328565; iTF_00940410; iTF_00184519; iTF_01037704; iTF_00018955; iTF_01031903; iTF_00418214; iTF_01433038; iTF_00670162; iTF_01304788;
- 90% Identity
- iTF_01037704;
- 80% Identity
- -