Rpad017798.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- Rcor2
- Assembly
- None
- Location
- scf7180000008276.635492:365578-373548[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-06 0.0017 18.9 0.0 3 46 126 169 124 169 0.95 2 2 3.5e-09 5.7e-06 26.9 0.0 3 45 352 394 350 395 0.95
Sequence Information
- Coding Sequence
- ATGGCTAACGATAATTTGGAAGATTTGAAAAACGGCAAACGACCAGCACCGCCTGCAAATGCTGAAAGTCCGGAATCTAAAAACGAACTCATACAAGAAAACGCTGAAAAAATCAGAGTGGGACGTGATTACCAGGCTGTCATTCCAAAACTATTGGTACTTCCAAAAAATAGACGTGAACGACTGAACAAAAAAGCACTATTAGTTTGGTCTCCAACTGAAACTATTTCAGAAATTAAATTAAATGAATACATTTTATTATCAAAAGAAAAATATGGTTACAATAGTGAACAAGCGTTGGGCATGCTATACTGGCATCACCACGACATGGAAAAAGCTCTTAGTGATCTATCAAATTTTGCACCTTTACCAGATGATTGGTCGACTGATGATAAGGTTACGTTTGAATCAGCGTTTAATAGTATTGGAAAAAATTTTTTACGCATTAAACAAATGATGCCTGATAAACCAATAGCATCGTTAGTCAAATATTATTATCTATGGAAAAATAAGAGAAAGAAGAGCAGTGTTATAGATCGACAAGCTAAAAGATTAGCAAATGTCCGTACAAATGAGAATCAAAACGGGAGTAGAGAAGGGTCAAGTTCAGCAGAGTCTGAACCTGATGACAAGGACCCTGGGGAAGGAAGTTCGAAACAGATTTGTTCAGTTTGTGGAGTTTTGGTTACTATGCTTTATACTACCACAAAAGGACCAATGTGTGGTACATGCCAATCACATTTCAATAGGACTAATGGTGGTATTAGACCAACATTAGGACCGCCACGTCCAAATAATCGCCATTTGAATGTCGCTCGTAATAAACGTTTACCACCACGAGGCATGTATGTTAATCATGATGATCTTCAGTCTATTGCATCTGGATCCAATGGACAAGGAGATACTATCCTATTGACAATGGACGATGAGGTTGTATCATTAAAATGCAAAATACAGTCTAACAAACAAGATATTGGACATGTGCATAAGAAACTTAAACTAGATGTTTCTGAATATCGAGAAAGTTCACCCACAGCAAGCCAAATTTCATCTCGTTGGAGCAATGCAGAAGTTATGCTTGCTATTCAAGGAATGCGCACGTATGGAAAAGATTTTAAAGCCATTGCTGAAACAATGGGAACAAAGACCCATACTCATTTGAAATCATTTTATACCCATTATCGTAAGCGTTATAAATTAGATTTAATTCTTGAAAAGTTTGACGCTGAGCAAAATGCGATAATTGAGGTTAGCGATGATGAGGATGAACCGGTCATCAGTAAAGATGAGTCTTCGTCTTCAATAACAAGACAGAGTACTCCATCTGCTTTAGCTTCTGGAAGTCGACTAATTAGTAACCTTTCATTGAATTCTAAAGCACATCAAACGGCTGCTGCTGCAAAGTGA
- Protein Sequence
- MANDNLEDLKNGKRPAPPANAESPESKNELIQENAEKIRVGRDYQAVIPKLLVLPKNRRERLNKKALLVWSPTETISEIKLNEYILLSKEKYGYNSEQALGMLYWHHHDMEKALSDLSNFAPLPDDWSTDDKVTFESAFNSIGKNFLRIKQMMPDKPIASLVKYYYLWKNKRKKSSVIDRQAKRLANVRTNENQNGSREGSSSAESEPDDKDPGEGSSKQICSVCGVLVTMLYTTTKGPMCGTCQSHFNRTNGGIRPTLGPPRPNNRHLNVARNKRLPPRGMYVNHDDLQSIASGSNGQGDTILLTMDDEVVSLKCKIQSNKQDIGHVHKKLKLDVSEYRESSPTASQISSRWSNAEVMLAIQGMRTYGKDFKAIAETMGTKTHTHLKSFYTHYRKRYKLDLILEKFDAEQNAIIEVSDDEDEPVISKDESSSSITRQSTPSALASGSRLISNLSLNSKAHQTAAAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167539;
- 90% Identity
- iTF_01304110;
- 80% Identity
- -