Nrib002575.1
Basic Information
- Insect
- Nasonovia ribisnigri
- Gene Symbol
- RCOR3
- Assembly
- GCA_027563275.1
- Location
- JANEHQ010000104.1:12053-18812[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-06 0.002 19.0 0.0 3 46 100 143 98 143 0.95 2 2 3.8e-10 3.2e-07 31.2 0.0 3 45 327 369 326 370 0.95
Sequence Information
- Coding Sequence
- ATGGCTAACGATAATTTGGAAGATTTGAAAAACGGCAAACGACCAGCAACGTCTGCAAATCCTGAAATAATGGACATCGACGATCTCATACAAGAAAACGCTGAAAAAATCAGAGTGGGACGTGATTACCAGGCTGTCATTCCAAAGCTATTGGTACTCCCAATAAATGAATACATATTATTATCAAAAGAAAAATATGGTTACAATAGTGAACAGGCATTGGGCATGCTATACTGGCATCACCACGACATGGAAAAGGCTCTTAGTGATTTATCAAATTTTGCTCCTCTGCCAGACGATTGGTCAACCGATGATAAGGTTACCTTTGAATCAGCCTTTAATAGCATCGGGAAGAATTTTTTACGGATTAAACAAATGATGCCTGATAAACCAATAGCATCATTAGTCAAATATTACTATCTTTGGAAAAATAAGAGAAAGAAGAACAGTCTTATAGACCGACAAGCTAAAAAATTAGCAAGTGTCCGCGCAAATGAGAATCAAAATGGAAGTAGAGAAGGGTCCAGTTCAGCAGAGTCTGAGCCAGATGACAAGAAGGACCCCGGGGAAGGAAGTTCAAAACAGTCTTGTTCAATTTGTGGAGTTTTTGTGACTACGCTTCATCCTACCCAAAAAGGATCAATGTGTGGCACATGCCATACACATTTCCGGAGGACTAATGGTGGTATTAGACCAACACTAGGTCCACCACGTCCAAACAATCGCCATCTGAATGTTGCTCGTAATAAGCGTTTACCACCACGAGGCATGTATGTTAATCATGATGATCTTCAATCTATTGCATCTGAATCCAATGGTCAAGGAGAGACTGTTTTATCGGCAATGGACGATGAGGTTGTATCATTAAAATGCAAAATCCAGTCCAACAAACAAGAAATTGGACATGCGCATAAGAAGCTTAAGCTTGATGTTACTGAACTTAGAAACAATGAACCCACTCCAAGTCGCGTTATTTCTCGTTGGAGCAATGATGAAGTTATGCTTGCTATTCAAGGAATGCGCAAGTATGGAAAAGATTTCAAAGCCATTGCTGAAACAATGGGAACAAAGACTCAAACCCATTTGAAATCATTTTATTCTCATTATCGTAAGCGTTATAAACTGGATACAATACTTAAAAAGTATGATGCTGAGCAAAATACAGTGATAATTGAGCTTAGTGATGACGAAGATGAACCGGTCATTAGAAAAGATGAGTCTTCATCTACTATAACTAGACAAAGTACACCATCAGCAATGGCTTCTGGAAGTCGGCTTATTAGTAACCTTACATTAAACCCTAAAGCACATCAAACAGCTGCTGCTGCAAAATGA
- Protein Sequence
- MANDNLEDLKNGKRPATSANPEIMDIDDLIQENAEKIRVGRDYQAVIPKLLVLPINEYILLSKEKYGYNSEQALGMLYWHHHDMEKALSDLSNFAPLPDDWSTDDKVTFESAFNSIGKNFLRIKQMMPDKPIASLVKYYYLWKNKRKKNSLIDRQAKKLASVRANENQNGSREGSSSAESEPDDKKDPGEGSSKQSCSICGVFVTTLHPTQKGSMCGTCHTHFRRTNGGIRPTLGPPRPNNRHLNVARNKRLPPRGMYVNHDDLQSIASESNGQGETVLSAMDDEVVSLKCKIQSNKQEIGHAHKKLKLDVTELRNNEPTPSRVISRWSNDEVMLAIQGMRKYGKDFKAIAETMGTKTQTHLKSFYSHYRKRYKLDTILKKYDAEQNTVIIELSDDEDEPVIRKDESSSTITRQSTPSAMASGSRLISNLTLNPKAHQTAAAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167539;
- 90% Identity
- iTF_00018955; iTF_00184519; iTF_01167539; iTF_00940410; iTF_01031903;
- 80% Identity
- -