Agos007964.1
Basic Information
- Insect
- Aphis gossypii
- Gene Symbol
- rcor1
- Assembly
- GCA_004010815.1
- Location
- NW:176688-185127[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-07 8.2e-05 22.1 0.0 3 46 125 168 123 168 0.95 2 2 3.4e-08 2.2e-05 24.0 0.0 3 45 352 394 350 395 0.94
Sequence Information
- Coding Sequence
- ATGGCTAACGATAATTTGGAAGATTTGAAAAACGGCAAACGACCAGCGCCGTCTGCAAATGCTGAAATGTCAGAAGTTGACGATCTCATACAAGAAAACGctGAAAAAATCAGAGTGGGACGTGATTTCCAAGCTGTCATTCCAAAACTAATGGTTCTCCCAAAAAACAGACGTGAACGACTAAACAAAAAAGCACTATTAGTTTGGTCTCCAACTGATAATATTTCagaacataaattaaatgaatacatattattatcgaaagAAAGATATGGCTACAACAGCGAACAAGCGTTGGGAATGCTATACTGGCATCACCACGACATGGAAAAAGCTCTTAGTGATCTATCAAATTTTGCACCTCTACCAGATGATTGGTCACCTGATGATAAGCTTACATTTGAATCCGCTTTTAATAGCATTGGGAAAAATTTTTTACGCATCAAACAAATGatgcCTGATAAACCTATAGCATCAttagtcaaatattattatctatggaaAAATAAGAGAAAGAAGACCAGTGTTATTGATCGACAAGCTAAAAAATTAGCTAATGTCCGTACAAATGAGAATCAAAACGGGAGTAGAGAAGGGTCAAGTTCTGCAGAATCTGAACCTGATGAAAagaaggaTCCCGGGGAAGGAAGTTCAAAACTGATTTGTTCAGTTTGTGGAGTTTTGGTTACTACGCTTTGTACTACATCAAAAGGACCAATGTGTGGTACATGTCAATCACATTTCAAtaGGACTAATGGTGGTATTAGACCAACACTAGGTCCGCCACGTCCAAATAATCGCCATTTGAATGTTGCTCGTAATAAACGTTTACCACCACGGGGCATGTATGTTAACCATGATGATCTTCAATCTATTGCAACTGAATCCAATGGACAAGGAGATAATATTCTAATGGCAATGGACGATGAGGTTGTATCATTAAAATGCAAAATACAGTCAAACAAACAAGATATTGGACATGTGCATAAGAAACTTAAACTAGATGTTTCTGAATATCGAAACAGTGAACCTACCACAAGTCGTATTACAAGTCGATGGTCCAATCAGGAAGTTATGCTTGCTATTCAAGGAATGCAAAGGTATGGAAAAAATTTTGCAGCCATTTCTGAAGCACTGGGAACAAAGAATATAAgccatttaaaaacattttatgttcatTATCGCAAGCGTTATAAACTAGATacaatacttaaaaagtatGAATCTGATCACAATTCAATAATTGAGCTtagtgatgatgatgatgaacaGgtcactagaaaaaaaaagtcttcGTCTACAATAACAAGGCAAAGTACACCATCTACTTTGACTTCTGGAACCCGACTAATTAGTAACATTACATTGAATTCTAAAACACATCAAACGACTGCTGCTGCAAAGTGA
- Protein Sequence
- MANDNLEDLKNGKRPAPSANAEMSEVDDLIQENAEKIRVGRDFQAVIPKLMVLPKNRRERLNKKALLVWSPTDNISEHKLNEYILLSKERYGYNSEQALGMLYWHHHDMEKALSDLSNFAPLPDDWSPDDKLTFESAFNSIGKNFLRIKQMMPDKPIASLVKYYYLWKNKRKKTSVIDRQAKKLANVRTNENQNGSREGSSSAESEPDEKKDPGEGSSKLICSVCGVLVTTLCTTSKGPMCGTCQSHFNRTNGGIRPTLGPPRPNNRHLNVARNKRLPPRGMYVNHDDLQSIATESNGQGDNILMAMDDEVVSLKCKIQSNKQDIGHVHKKLKLDVSEYRNSEPTTSRITSRWSNQEVMLAIQGMQRYGKNFAAISEALGTKNISHLKTFYVHYRKRYKLDTILKKYESDHNSIIELSDDDDEQVTRKKKSSSTITRQSTPSTLTSGTRLISNITLNSKTHQTTAAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167539;
- 90% Identity
- iTF_00134202;
- 80% Identity
- -