Msac010291.1
Basic Information
- Insect
- Melanaphis sacchari
- Gene Symbol
- rcor2
- Assembly
- GCA_002803265.2
- Location
- NW:3284404-3291026[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-07 0.00046 19.7 0.0 3 46 125 168 123 168 0.95 2 2 2e-11 1.1e-08 34.4 0.0 2 45 352 395 351 396 0.95
Sequence Information
- Coding Sequence
- ATGGCTAACGATAATTCGGAAGATTTGAAAAACGGCAAACGACCAGCACCGTCTGCAAATGCTGAAGAGTCGGAAATCGATGAACTTATACAAGAAAACGttgaaaaaatCAGAGTGGGACGTGATTACCAGGCTGTCATTCCAAAATTGTTGGTTCTCCCAAaaaatagacgTGAACGACTGAACAAAAAAGCACTATTAGTTTGGTCTCCAACCGaaaatatttcagaaattaaattaaatgaatacatattattatcaaaagaaaaatatggtTACAATAGTGAACAAGCGTTGGGTATGCTGTACTGGCATCACCACGACATGGAAAAAGCTCTTAGTGATCTATCAAATTTTGCACCTTTACCTGATGATTGGTCAACTGATGATAAGGTTACATTTGAATCAGCTTTTAATAGTATTGGAAAAAATTTTGTACGCATTAAACAaatgATGCCTGATAAACCAATAGCATCAttagtcaaatattattatctatggaAAAATAAGAGAAAGAAGAATAGTGTTATAGACCGACAAGCTAAAAAATTAGCAAATGTCCGTGCCAATGAGAATCAAAATGGGAGCGGAGAAGTGGTGCTAAGTTCACCAGAGTCTGAATCTGATGACaagaaaGACCTTGGGGAAGGAAGTTCAAAACAGGAGTGTACAGTTTGTGGAGTTGAGGTTACTATGATTTATACTACCATAAAAGGATTAATGTGTGGTACATGCCAATCacattttaatagGACTAATGGTGGTATTAGACCAACACTAGGTCCACCACGTCCAAATAATCGCCATTTGAATGTTGCTCGTAATAAACGTTTACCACCACGAGGCATGTATGTCAATCATGATGATCTTCAATCTATTGCATCTGGATCCAATGGACAAGGGGATACTATTCTAACAGCAATGGAAGATGAAGTTGTATCATTAAAATGCAAAatacagTCTAACAAACAAGATATTGGACATGTGCATAAGAAACTTAAATTAGATGTTGATGAATATCGAAATAGTGAACCTGAAACAAATAGTGTACAAAATCGTTGGACAAATGATGAAGTTATGCTTGCTATTGAAGGAATGCGCAGGTATGGAAAAGATTTTAAAGCTATTGCTGAAGCAATGGGAACAAAAACTCATAATCATTTGAAGTCATTTTATACTCATTATCGTAAGAGTTATAAACTAGATACGATACTCAAAAAGTATGAAGAAGAGAAAAATGCTGAGCAAAATCCGGATCAACATTTTGAAGATAATTCGGAGCAACATTTTGAGGATAATTCTTTGGTAATTGAGCTTAGAGATGATGAGGATGTATTGgtcaaaagaaaaaatcagCCTTCATCTTCAAAAGTAAGACAGAGTACACCATCTTCTTTGGCTTCTGGAACTCGACTAATTAACCTTggattaaattctaaaacacATCAAACGGCTGCTGTTGCAAAGTGA
- Protein Sequence
- MANDNSEDLKNGKRPAPSANAEESEIDELIQENVEKIRVGRDYQAVIPKLLVLPKNRRERLNKKALLVWSPTENISEIKLNEYILLSKEKYGYNSEQALGMLYWHHHDMEKALSDLSNFAPLPDDWSTDDKVTFESAFNSIGKNFVRIKQMMPDKPIASLVKYYYLWKNKRKKNSVIDRQAKKLANVRANENQNGSGEVVLSSPESESDDKKDLGEGSSKQECTVCGVEVTMIYTTIKGLMCGTCQSHFNRTNGGIRPTLGPPRPNNRHLNVARNKRLPPRGMYVNHDDLQSIASGSNGQGDTILTAMEDEVVSLKCKIQSNKQDIGHVHKKLKLDVDEYRNSEPETNSVQNRWTNDEVMLAIEGMRRYGKDFKAIAEAMGTKTHNHLKSFYTHYRKSYKLDTILKKYEEEKNAEQNPDQHFEDNSEQHFEDNSLVIELRDDEDVLVKRKNQPSSSKVRQSTPSSLASGTRLINLGLNSKTHQTAAVAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167539;
- 90% Identity
- -
- 80% Identity
- -