Sgrm002337.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- RCOR2
- Assembly
- GCA_003264975.1
- Location
- QEWZ01006023.1:1101440-1109393[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-07 0.00055 20.5 0.0 3 46 126 169 124 169 0.95 2 2 2.5e-10 3.7e-07 30.7 0.0 3 45 353 395 351 396 0.95
Sequence Information
- Coding Sequence
- ATGGCTAACGATAATTTGGAAGATTTGAAAAACGGCAAACGACCAGCACCGCCTGCAAATGCTGAAGTTCCGGAATCTAAAAACGAACTCATACAAGAAAACGctgAAAAAATCAGAGTGGGACGTGATTACCAGGCTGTCATTCCAAAACTATTGGTACTCCCAAAAAATAGACGTGAACGACTAAACAAAAAAGCACTATTAGTTTGGTCTCCAACTGAAACTATTTcagaaattaaattaaatgaatacattttgttatcaaaagaaaaatatggTTACAATAGTGAACAAGCGTTGGGTATGCTATACTGGCATCACCACGACATGGAAAAAGCTCTTAGTGATCTATCAAATTTTGCACCTTTACCAGATGATTGGTCGACTGAAGATAAGGTTACGTTTGAATCAGCTTTTAATAGTATTGGAAAAAATTTTTTACGCATTAAACAAATGATGCCTGATAAACCAATAGCATCGTtagtcaaatattattatctatggaaAAATAAGAGAAAGAAGAACAGTGTTATAGATCGACAAGCTAAAAAGTTAGCAAATGTCCGTACAAATGAGATTCAAAACGGGAGTAGAGAAGGGTCAAGTTCAGCAGAGTCTGAACCTGATGACAagaaggaCCCTGGGGAAGGAAGTTCAAAACAGATTTGTTCAGTTTGTGGAGTTTTGGTTACTATGCTTTATACTACCTTAAAAGGACCAATGTGTGGTACATGCCAATCACATTTCAATAGGACTAATGGTGGTATTAGACCAACATTAGGACCGCCACGTCCTAATAATCGCCATTTGAATGTTGCTCGTAATAAACGTTTACCACCACGAGGCATGTATGTTAATCATGATGATCTTCAATCTATTGCATCTGGATCCAATGGACAAGGAGATACTATCCTATTGGCAATGGACGATGAGGTTGTATCATTAAAATGCAAAATACAGTCTAACAAACAAGATATTGGACATGTACATAAGAAACTTAAACTAGATGTTTCTGAATATCGAGATAGTACACCCACAACAAGCCAAATTACATCTCGTTGGAGTAATGATGAAGTTATGCTTGCTATTcaagGAATGCGCAAGTATGGAAAAGATTTTAAAGCCATTGCTGAAACAATGGGAACAAAGACCCATACCCATTTGAAATCATTTTATACCCATTATCGTAAGCGTTATAAACTAGATTTAATTCTTCAAAAGTTTGACGCTGAGCAAAATTCGATAATTGAGGTTAGCGATGATGAGGAGGAACCggttatcAGTAAAGATGAGCCTTCGTCTACAATAACAAGACAGAGTACTCCATCTGCTTTAGCTTCTGGAAGTCGACTAATTAGTAACCTTTCATTGAATTCTAAAGCACATCAAACGGCTGCTGCTGCAAAGTGA
- Protein Sequence
- MANDNLEDLKNGKRPAPPANAEVPESKNELIQENAEKIRVGRDYQAVIPKLLVLPKNRRERLNKKALLVWSPTETISEIKLNEYILLSKEKYGYNSEQALGMLYWHHHDMEKALSDLSNFAPLPDDWSTEDKVTFESAFNSIGKNFLRIKQMMPDKPIASLVKYYYLWKNKRKKNSVIDRQAKKLANVRTNEIQNGSREGSSSAESEPDDKKDPGEGSSKQICSVCGVLVTMLYTTLKGPMCGTCQSHFNRTNGGIRPTLGPPRPNNRHLNVARNKRLPPRGMYVNHDDLQSIASGSNGQGDTILLAMDDEVVSLKCKIQSNKQDIGHVHKKLKLDVSEYRDSTPTTSQITSRWSNDEVMLAIQGMRKYGKDFKAIAETMGTKTHTHLKSFYTHYRKRYKLDLILQKFDAEQNSIIEVSDDEEEPVISKDEPSSTITRQSTPSALASGSRLISNLSLNSKAHQTAAAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167539;
- 90% Identity
- iTF_01304110;
- 80% Identity
- -