Rmai001624.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- rcor2
- Assembly
- GCA_003676215.3
- Location
- NC:43126967-43135857[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-06 0.00076 19.0 0.0 3 46 126 169 124 169 0.95 2 2 1.4e-09 9.9e-07 28.2 0.0 3 45 346 388 344 389 0.95
Sequence Information
- Coding Sequence
- ATGGCTAACGATAATTCAGAAGATTTGAAAAACAGCAAACGACCAGCACCGCCTGCAAATGCTGAACTTTCGGAATCTGAAAACGAACTCATACAAGAAAACGctgAAAAAATCAGAGTGGGACGTGATTACCAGGCTGTCATTCCAAAACTATTGGTACTCCCAAAAAATAGACGTGAACGACTGAACAAAAAAGCACTATTAGTTTGGTCTCCAACTGAAACTATTTcagaaattaaattaaatgaatacattttattatcaaaagaaaaatatggtTACAATAGTGAACAAGCATTGGGCATGCTATACTGGCATCACCACGACATGGAAAAAGCTCTTAGTGATCTATCAAATTTTGCACCTTTACCAGATGATTGGTCGACTGATGATAAGGTTACGTTTGAATCAGCTTTTAATAGTATtggaaaaaattttttacGCATTAAGCAAATGaTGCCTGATAAACCAATAGCTTCGttagtcaaatattattatctatggaAAAATAAGAGAAAGAAGAGCAGTGTTATAGATCGACAAGCTAAAAAATTAGCAAATGTCCGTACAAATGAGAATCAAAATGGCAGTAGAGAAGGGTCAAGTTCAGCAGAGTCTGAATTTGATGACaagaaggaCCCTGGGGAAGGAAGTTCGAAACAGATTTGTTCAGTTTGTGGAGTTTTGGTTACTATGCTTTATACTACCTTAAAAGGACCTATGTGTGGTACATGCCAATCACATTTCAATAGGACTAATGGTGGTATCAGACCAACATTAGGACCGCCACGTCCAAATAATCGCCATTTGAATGTCGCTCGTAATAAACGTTTGCCACCACGAGGCATGTATGTTAATCATGATGATCTTCAGTCTATTGCATCTGGATCCAATGGACAAGGAGATACTATCTTATTGACAATGGACGATGAGATACAGTCTAACAAACAAGATATTGGACATGTGCATAAGAAACTTAAACTAGATGTTTCTGAATATCGAGACAGTTCACCCACAACAAGCCAAATTACATCTCGTTGGAGCAATGATGAAGTTATGCTTGCTATTCAAgGAATGCGCACGTATGGAAAAGATTTTAAAGCCATTGCTGAAACAATGGGAACAAAGACCCATACCCatttgaaatcattttttaccCATTATCGTAAGCGTTATAAActagatttaattattcaaaagtttTACGCTGAGCAAAATTCGATAATTGAGGTTAGCGATGATGAGGAAGAACcggtcatCAGTAAAGATGAGCCTTCGTCTACAATAACAAGACAGAGTACTCCATCTGCTTTAGCTTCTGGAAGTCGATTAATTAGTAACCTTTCATTGAATTCTAAAGCACATCAAACAGCTGCTGCTGCAAAGTGA
- Protein Sequence
- MANDNSEDLKNSKRPAPPANAELSESENELIQENAEKIRVGRDYQAVIPKLLVLPKNRRERLNKKALLVWSPTETISEIKLNEYILLSKEKYGYNSEQALGMLYWHHHDMEKALSDLSNFAPLPDDWSTDDKVTFESAFNSIGKNFLRIKQMMPDKPIASLVKYYYLWKNKRKKSSVIDRQAKKLANVRTNENQNGSREGSSSAESEFDDKKDPGEGSSKQICSVCGVLVTMLYTTLKGPMCGTCQSHFNRTNGGIRPTLGPPRPNNRHLNVARNKRLPPRGMYVNHDDLQSIASGSNGQGDTILLTMDDEIQSNKQDIGHVHKKLKLDVSEYRDSSPTTSQITSRWSNDEVMLAIQGMRTYGKDFKAIAETMGTKTHTHLKSFFTHYRKRYKLDLIIQKFYAEQNSIIEVSDDEEEPVISKDEPSSTITRQSTPSALASGSRLISNLSLNSKAHQTAAAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167539;
- 90% Identity
- iTF_01305485; iTF_01304788; iTF_01328565;
- 80% Identity
- -