Basic Information

Insect: Parnassius smintheus
Gene Symbol: -
Assembly: GCA_036936625.1
Location: JAUPFT010000027.1:17898177-17910703[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.3e-08 3.5e-06 28.9 0.0 1 34 177 210 177 217 0.93

2 2 2.4e-09 6.4e-07 31.2 0.0 2 40 253 291 252 296 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.3e-08	3.5e-06	28.9	0.0	1	34	177	210	177	217	0.93
2	2	2.4e-09	6.4e-07	31.2	0.0	2	40	253	291	252	296	0.83

Sequence Information

Coding Sequence: atggatccGTTAGACGGTGAAATGGTGATATTCATAGGAAGATGTAAATGTTGCCTTAATGAAGGAGATTTAAAAAATTTGTGGACGCCTTATACGTTTGAAGGAGAAACCGAAATTTATGGAATGATGTTGACAGAATGTTTTGCTCTATCATGGCAGCAACCAGAGGAAAACGTGGGGTATATGGATATGATATGCACCTCTTGCATTTCTCGGTTACGCGATGCACTTGCCTTCAAAAGAGAAGTTTTAGTAAGTGAAGAGGTGCTGCATGAAAAACAAGATGAATTGTTTCTTTACACTACATTGAAAGTGGAGAAAGATTtagaagatgaagaagaagaaaccGAGTTTAACGAAGTGGAATACTTAGATATCACAGATAGTTTAAACAAAGATGAATCATATGAAGAATCTTTATCAGATGAACAATTGCTGAGTTCAGATAACTCCATGCGAGTAGAACATAAAAGAAAGTTGTCAAAAAAGCTCCCAAAGGAAGAGAGGAACAAATCATACAAGCAGTATACTGACGAGGAATTACAAATGGCCATTGATGCAGTCCAGAACAATGAAATGTCACATACAGAAGCAGCCGAGTTGTTTAATGTGCCCAGGAAAACTATCTCTGCTAAGATCCACAATATTACAGACAAAGAAGAGGAACAATCGCAGAGTGCAGAAGAAAATAGTAAAAGAAAATGGCCGAAGAAACTACCAAAGAAAGACAGAAACAAAACATACAAGCAGTATACTGAAAAGACGCTGAGAATGGCCGTTGATGCTGTCCAGAATAAAGGGATGTCATGTAACCAAGCGTCAGAGATATTTAAGGTGCCCAGGAAGACTCTTGCATTTAGAGTTCAGAATACTATTGCCAAAAAAGAGGAACCAGATGATGATGACACCTCAAAAATAACAGACCAAGAAAAACACTACAAACTCGTAGAGGAAATTAAAACTATACTCACCTACACAAACGCTATACCATACAAATCGAAATTGTCAAGGTACTACTGTGCATACTGCTCTACCGATGGACCGGTTTTTGATGAACCCGATGAGTTGAGGACTCACACTAAAACGAAGCATGTCGATGATCGGACCAAAGGTATAGATCAGATAATGAGACCACACTGGCTTAATGAGGTGTTAAGAATTGATATACATAGTCTCCATTGTACAGTTTGCTGTACAATCCTGCCGACTTGGAACGACATGTTCCGACATCTTGAAGATGTGCATGAGGTTTTTCTAGACGAGGCCTACAACAGAGTTATACCTTATATTCTCGCAAGGGAGCTGAAATGTGCTTTATGTGAAGAAGCCTTCCCGAATTACCACATGCTGGACGGACATATGAACGCCCATTATAGCAGTTACATTTGCTACGAATGCGGCGATACTTTCTTATCAGCGAACCGACTTAATAAACATGTGGAAGTGCACAGTACTGGGAGGTTCCCCTGCGAGGTTTGCGGTAAAGTGTACAATTTGAAGAAATACATGAGAAAGCACTTTGTCATTGTACATGGACAGAAGGACCAATACAAATGCACATACTGTCCGGAAAGATTTTCTAGAGCATTCCAGAGACATCAGCATGTACTCGAAAAGCACAAAGAGACAGTCAAGATAAGGACTTGTGAGATCTGCGGAAAGACTTTCGACTGGATGCCTTACTTCTGGGCTCACATGAGACGAAGGCATGGGCAAAAGAGGAATTACAAATGCAAACAGTGTGACAAAAGCTTCCTTATGAAGTATCAGTTGCGGGACCATCAAGAAAAGCATTTGGAGGAGAGGAACTTTGTTTGTGATGTGTGCAGTGAGAGATTTAAAACCAAAGCGGGCTTAGTGCGACATTGTCAGCTACATCATAACTTTCCAACCTCAAAATGTCAGACCAGTcaaacagttaaataa
Protein Sequence: MDPLDGEMVIFIGRCKCCLNEGDLKNLWTPYTFEGETEIYGMMLTECFALSWQQPEENVGYMDMICTSCISRLRDALAFKREVLVSEEVLHEKQDELFLYTTLKVEKDLEDEEEETEFNEVEYLDITDSLNKDESYEESLSDEQLLSSDNSMRVEHKRKLSKKLPKEERNKSYKQYTDEELQMAIDAVQNNEMSHTEAAELFNVPRKTISAKIHNITDKEEEQSQSAEENSKRKWPKKLPKKDRNKTYKQYTEKTLRMAVDAVQNKGMSCNQASEIFKVPRKTLAFRVQNTIAKKEEPDDDDTSKITDQEKHYKLVEEIKTILTYTNAIPYKSKLSRYYCAYCSTDGPVFDEPDELRTHTKTKHVDDRTKGIDQIMRPHWLNEVLRIDIHSLHCTVCCTILPTWNDMFRHLEDVHEVFLDEAYNRVIPYILARELKCALCEEAFPNYHMLDGHMNAHYSSYICYECGDTFLSANRLNKHVEVHSTGRFPCEVCGKVYNLKKYMRKHFVIVHGQKDQYKCTYCPERFSRAFQRHQHVLEKHKETVKIRTCEICGKTFDWMPYFWAHMRRRHGQKRNYKCKQCDKSFLMKYQLRDHQEKHLEERNFVCDVCSERFKTKAGLVRHCQLHHNFPTSKCQTSQTVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01160051; iTF_01154644; iTF_01153815; iTF_01153771; iTF_01154637; iTF_01158613; iTF_01160094; iTF_01154586; iTF_01153770; iTF_01157578; iTF_01158291; iTF_01154933; iTF_01155837; iTF_01155814; iTF_01154947; iTF_01156206; iTF_01157225; iTF_01158289; iTF_01157580;
90% Identity: iTF_01154586;
80% Identity: iTF_01160051;