Pgla010081.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- -
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000004.1:65805965-65818985[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-06 0.00067 21.2 0.1 1 34 179 212 179 218 0.87 2 2 1.7e-09 5.1e-07 31.2 0.0 2 40 255 293 254 298 0.85
Sequence Information
- Coding Sequence
- atggATTCGTTAGACGGTGATGGTGAAATGGTGATCTTCATAGGAAGATGTAAATGTTGCCTTAATGAAggagatttaaaaaatatgtggACGCCGTATACATATGAAGGAGAAACCGAAATTTATGGAATGATGTTGACAGAATGTTTTGCTCTATCATGGCAGCAGCCAGAGGATAACATGAAGTATATGGATATGATATGCATCTCTTGCATCTCTCGGTTACGTGATGCACTTGCTTTCAAAAGAGAAGTTTTAGTAAGCGAAGAGGTGTTGCGTGAAAATCAAGATGAAATACTACTTTATACTACAGTGAAAGTGGAGGAAGATTTAgaagaggaagaagaaaaaaccGAGTATAACGATGTGGAATACTTAGAAGTCCCAGACAGTTTAAACAAAGATGAACTATATGAAGAATATTTATCAGATGAACAATTACTGAGTTCAGATAACTCCCTGCTAATAGAATGTAAAAGAAAGAGGTCAAAAAGGCTTACAAATGAAGAGAGGAACAAAACATACAAGCAGTATACTGAAGAGGAACTACAAATGGCTGTTGATGCAGTCCAGTACAATGAAATGTCACAAACAGAAGCCGCAGAGCTGTTTAATGTGCACAGGCAAAGTATCTCTGCTAAGATCCGCAATATTGCAAACGAAGAAGAGGAACAATCGCAGAGTCCAGAAGAAATTCGGAAAAGAAAATTTCCGAAGAAACTACCAAAGCAAGACCGAAACAAAACATACAAGCAGTATACTGAAAAGACACTGAGAATGGCCATTGATGCTGTCCAGAATGAAGGGATGTCACGTAACAAAGCGGCAGAGAAGTTCAAGGTGCCGAGGAAGACTCTTGCATTAAGACTTCAGAATGCTATTGCCAAAAAAGAGGAACcggatgatgatgatgcatcGAAAATTATAGATCAAGAAAAACACTACAAACTCGTAGAGGAAATTAAATCAATACTCACTTACACAAACGCAATACCATATAAATCAAGATTGTCAAGGTACTACTGCGCATACTGCTCTACAGATGGACCAGCTTTTGATGACGCCGATGATTTGAGGGTTCACACTAAAACAAAACACGTCGATGATCGGACCAAAGGTGTAGATCAGATAATGAGACCACACTGGCTTAATGAGGTGTTAAGGATTGATATACACAGTCTCCATTGTACAGTTTGCTGTACAATCCTGCCCACTTGGAACGACATGTTCCGACATCTTGAAGATGTGCACGAGGTTGTTCTAGATGAGGCCTACAACAGAGTTATACCTTATATCCTTGCAAGGGAGCTGAAATGCGCTTTATGTGGAGAAGCCTTTCCGAATTACCACATGCTGGACGGACATATGAACGCCCATTACAGTAGTTACATTTGCTCCGAATGCGGTGATACTTTCTTATCAGCGAGCCGACTTAAAAAACATGTGGAAGTACACAATACTGGGAGGTTCCCTTGCGAGGTCTGCGGTAAAGTTTACAATTTGAAGAAGTACATGAAGAAGCATTTTGTCATCGTACATGGACAGAAAGATCAATACAAATGCTCGTACTGTCCGGAAAGATTCTCCAGAACATTCCAAAGACATCAGCATGTACTCGAAAATCACAAAGAGATGGTCAAGATTAAAACTTGTGAGATCTGCGGAAAGACATTCGACTGGATGCCCTACTACTCGGCTCACATGAGACGAAAGCACGGGAAAGAGAAGAATTACAAATGCAAACAGTGCGACAAAAGATTCCTTATGAAGTATCAATTGAAAGACCATCAAGAAAAGCATTTGGAGGAAAGGAACTTTGTTTGTGATGTGTGCAATGAGAGATTTAAAACTAAAGCCGGCTTAGTGCGTCACTGTCAGCTGCATCATAACTTTCCAACGGCGAAAAGTCAGATGGTTAAATAA
- Protein Sequence
- MDSLDGDGEMVIFIGRCKCCLNEGDLKNMWTPYTYEGETEIYGMMLTECFALSWQQPEDNMKYMDMICISCISRLRDALAFKREVLVSEEVLRENQDEILLYTTVKVEEDLEEEEEKTEYNDVEYLEVPDSLNKDELYEEYLSDEQLLSSDNSLLIECKRKRSKRLTNEERNKTYKQYTEEELQMAVDAVQYNEMSQTEAAELFNVHRQSISAKIRNIANEEEEQSQSPEEIRKRKFPKKLPKQDRNKTYKQYTEKTLRMAIDAVQNEGMSRNKAAEKFKVPRKTLALRLQNAIAKKEEPDDDDASKIIDQEKHYKLVEEIKSILTYTNAIPYKSRLSRYYCAYCSTDGPAFDDADDLRVHTKTKHVDDRTKGVDQIMRPHWLNEVLRIDIHSLHCTVCCTILPTWNDMFRHLEDVHEVVLDEAYNRVIPYILARELKCALCGEAFPNYHMLDGHMNAHYSSYICSECGDTFLSASRLKKHVEVHNTGRFPCEVCGKVYNLKKYMKKHFVIVHGQKDQYKCSYCPERFSRTFQRHQHVLENHKEMVKIKTCEICGKTFDWMPYYSAHMRRKHGKEKNYKCKQCDKRFLMKYQLKDHQEKHLEERNFVCDVCNERFKTKAGLVRHCQLHHNFPTAKSQMVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01158611;
- 90% Identity
- iTF_01157578;
- 80% Identity
- iTF_01155837;