Porl018741.1
Basic Information
- Insect
- Parnassius orleans
- Gene Symbol
- -
- Assembly
- GCA_029286625.1
- Location
- JAGSMP010000055.1:4638265-4649012[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-08 4.5e-05 25.1 0.0 1 36 179 214 179 221 0.91 2 2 3.8e-09 2.2e-06 29.3 0.0 2 40 255 293 254 298 0.85
Sequence Information
- Coding Sequence
- atggaTTCGTTAGACGGTGATGGTGAAATGGTGATCTTCATAGGAAGATGTAAATGTTGCCTTAATGAaggagatttaaaaaatatgtggaCGCCGTATACATATGAAGGAGAAACCGAAATTTATGGAATGATGTTGACAGAATGTTTTGCTCTGTCATGGCAGCAACCAGAGGATAACATGGGATATATGGATATGATATGCATCTCTTGCATCTCTCGGTTACGTGATGCACTTGCCTTCAAAAGAGAAGTTTTAGTGAGTGAAGAGGTGCTGCGTGAAAATCAAGATGAAATATTTCTTTATACTACAGTAAAAGTGGAGGAAGATTTagaagaggaagaagaaaaaacCGAGTTTAACGATGTGGAATACTTAGAGGTCACTGACAGTATAAACAAAGATCAACTATATGAAGAATATTTATCAGGTGAACAATCGCTGAGTTCAGATAACTCCCAGCTAGTAGAACGTAAAAGAAAGAGGTCAAAAAAGCTCACAAAGGAAGAGAGGAACAAAACATACAAGCAGTACACTGAAGAGGAACTACAAATGGCCATTGATGCAGTCCAGAATAATGAAATGTCACATACAGAAGCGGCTGAGTTTTTTAAAGTGCCCAGGCAAACTATCTCTGCTAAGATCCGCAATATTGTAGACGAAGAAGAGGAACAATCGCAGAGTCCAGAAGAAAATCGGAAAAGAAAATTTCCGAAGAGACTACCAAAGCAAGACCGAAACAAAACATACAAGCAGTATACTGAAAAGACACTGAGAATGGCCATTGATGCTGTCCAGAATGAAGGGATGTCACGTAACAAAGCGTCAGAGAAGTTTAAGGTGCCCAGGAAGACTCTTGCATTAAGACTTCAGAATGCTATTGCCAAAAAAGAGGAAccggatgatgatgatgcatcAAAAATAATAGACCAAGAAAAACACTATAAACTCGTAGAGGAAATTAAATCTATACTCACTTACACAAACGCTATACCGTACAAATCGAGATTGTCAAGGTACTACTGTGCATACTGCTCTACAGATGGACCAGCTTTTGATGACGCCGATGATTTGAGAATTCACACTAAAACAAAGCATGTCGATGATCGGACCAAAGGCGTAGATCAGATAATGAGACCACACTGGCTTAATGAGGTGTTAAGGATTGATATATACAGTCTCCATTGTACAGTTTGCTGTACAATCCTGCCCACTTGGAACAACATGTTCCGACATCTGGAAGACGTGCACGAGGTTGTTCTAGATGAGGCCTACAACAGAGTTATACCTTATATCCTCGCAAGGGAGCTGAAATGCGCTTTATGTGGTGAAGCCTTTCCGAATTACCATATGCTGGACGGACATATGAATGCCCATTACAGCAGTTACATTTGCTACGAATGCGGTGATACTTTCTTATCAGCGAGTCGACTTAAAAAACATGTGGAAGTACACAATACTGGGAGGTTCCCTTGCGAGGTTTGCGGTAAAGTGTACAATTTGAAGAAGTACATGAAAAAGCATTTTGTCATTGTACATGGACAGAAGGAGCAATACAAATGCTCGTACTGTCCGGAAAGATTCTCCAGAACATTCCAGAGACATCAGCATGTACTTGAAAAGCACAAAGAGATGGTCAAGATAAAGACTTGTGAGATCTGCGGAAAGACATTCGACTGGATGCCCTACTACTCGGCTCACATGAGACGAAAGCATGGGAACGAGAAAAATTACAAATGCAAACAGTGCGACAAAAGATTCCTTATGAAGTATCAGTTGAGGGACCATCAAGAAAAGCATTTGGAGGAGAGGAACTTTGTTTGTGACGTGTGCAGTGAGAGATTTAAAACTAAAGCCGGTTTAGTGCGACACTGTCAGCTGCATCATAACTTTCCAACTGCAAAAAGGCAGACGGTTAAATAA
- Protein Sequence
- MDSLDGDGEMVIFIGRCKCCLNEGDLKNMWTPYTYEGETEIYGMMLTECFALSWQQPEDNMGYMDMICISCISRLRDALAFKREVLVSEEVLRENQDEIFLYTTVKVEEDLEEEEEKTEFNDVEYLEVTDSINKDQLYEEYLSGEQSLSSDNSQLVERKRKRSKKLTKEERNKTYKQYTEEELQMAIDAVQNNEMSHTEAAEFFKVPRQTISAKIRNIVDEEEEQSQSPEENRKRKFPKRLPKQDRNKTYKQYTEKTLRMAIDAVQNEGMSRNKASEKFKVPRKTLALRLQNAIAKKEEPDDDDASKIIDQEKHYKLVEEIKSILTYTNAIPYKSRLSRYYCAYCSTDGPAFDDADDLRIHTKTKHVDDRTKGVDQIMRPHWLNEVLRIDIYSLHCTVCCTILPTWNNMFRHLEDVHEVVLDEAYNRVIPYILARELKCALCGEAFPNYHMLDGHMNAHYSSYICYECGDTFLSASRLKKHVEVHNTGRFPCEVCGKVYNLKKYMKKHFVIVHGQKEQYKCSYCPERFSRTFQRHQHVLEKHKEMVKIKTCEICGKTFDWMPYYSAHMRRKHGNEKNYKCKQCDKRFLMKYQLRDHQEKHLEERNFVCDVCSERFKTKAGLVRHCQLHHNFPTAKRQTVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01158611;
- 90% Identity
- iTF_01158291; iTF_01154933; iTF_01155837;
- 80% Identity
- iTF_01158291;