Basic Information

Insect: Papilio protenor
Gene Symbol: -
Assembly: GCA_029286645.1
Location: JAGSMZ010000014.1:1564590-1580534[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.2 4.5e+02 2.1 0.1 2 20 501 519 500 522 0.78

2 18 0.0027 0.24 12.5 0.1 1 23 532 555 532 555 0.95

3 18 0.013 1.1 10.3 1.8 1 21 667 687 667 688 0.94

4 18 0.032 2.8 9.1 3.8 2 23 752 773 751 773 0.95

5 18 2.5 2.2e+02 3.1 1.6 1 23 785 809 785 810 0.89

6 18 3e-05 0.0026 18.6 0.3 2 23 816 839 815 839 0.97

7 18 0.063 5.5 8.2 0.2 1 23 845 867 845 867 0.93

8 18 0.0014 0.12 13.4 4.1 1 23 873 895 873 895 0.98

9 18 0.94 82 4.5 0.0 2 21 906 925 905 926 0.87

10 18 0.15 13 7.0 0.1 1 23 998 1020 998 1020 0.96

11 18 1.9 1.6e+02 3.5 7.2 1 23 1027 1049 1027 1049 0.95

12 18 0.0013 0.11 13.5 1.8 1 23 1090 1113 1090 1113 0.95

13 18 0.00087 0.075 14.0 0.8 1 23 1120 1143 1120 1143 0.98

14 18 0.056 4.9 8.3 0.1 2 23 1189 1211 1188 1211 0.95

15 18 0.00014 0.012 16.5 1.0 2 23 1237 1259 1236 1259 0.94

16 18 0.0017 0.15 13.1 0.2 1 23 1273 1295 1273 1295 0.96

17 18 8.4e-05 0.0073 17.2 0.1 1 23 1301 1323 1301 1323 0.98

18 18 0.00014 0.012 16.5 0.7 3 23 1331 1352 1329 1352 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.2	4.5e+02	2.1	0.1	2	20	501	519	500	522	0.78
2	18	0.0027	0.24	12.5	0.1	1	23	532	555	532	555	0.95
3	18	0.013	1.1	10.3	1.8	1	21	667	687	667	688	0.94
4	18	0.032	2.8	9.1	3.8	2	23	752	773	751	773	0.95
5	18	2.5	2.2e+02	3.1	1.6	1	23	785	809	785	810	0.89
6	18	3e-05	0.0026	18.6	0.3	2	23	816	839	815	839	0.97
7	18	0.063	5.5	8.2	0.2	1	23	845	867	845	867	0.93
8	18	0.0014	0.12	13.4	4.1	1	23	873	895	873	895	0.98
9	18	0.94	82	4.5	0.0	2	21	906	925	905	926	0.87
10	18	0.15	13	7.0	0.1	1	23	998	1020	998	1020	0.96
11	18	1.9	1.6e+02	3.5	7.2	1	23	1027	1049	1027	1049	0.95
12	18	0.0013	0.11	13.5	1.8	1	23	1090	1113	1090	1113	0.95
13	18	0.00087	0.075	14.0	0.8	1	23	1120	1143	1120	1143	0.98
14	18	0.056	4.9	8.3	0.1	2	23	1189	1211	1188	1211	0.95
15	18	0.00014	0.012	16.5	1.0	2	23	1237	1259	1236	1259	0.94
16	18	0.0017	0.15	13.1	0.2	1	23	1273	1295	1273	1295	0.96
17	18	8.4e-05	0.0073	17.2	0.1	1	23	1301	1323	1301	1323	0.98
18	18	0.00014	0.012	16.5	0.7	3	23	1331	1352	1329	1352	0.95

Sequence Information

Coding Sequence: ATGGAACCGCAGCTTCCACCTTTAATACTTTGTATGGAGAACATGAATGGAGAAGAAGTATCACTTAGTATTGGACCTAATGATGATTTCCAAACCTTCCTGGATAAAGCCAAATCTACTCTAGGTTTCGACGTAGATTTAAACTCGATTACCGGCGACCAATCTGTAtcattaaatgaaaacatttatcatTACCTTCTAAATTCAGAACTGAACTATCAAACTGATCCACAATTAGGTACCGAAAATTTCCAACGTACACCAGAACAGGGTACACATAGTCCCGATGGTTTTGTATACGTTTTAGACGACGGCACACAAATACGAGCATCTCAGATACATTTCGATAACGAAGATCCTCCTTTAGATTTAACAGCTGAACAAATACCATTCGTTAAATACGCCAATGATAGTGCCGATGAAAATGAAGTCGATGATCAAAATATaggaaatactaaaaaaataaacatcgtCGAAAGTCCTGTTAAACGTTGGGAAAGCAGAAATTCCAGTCCTAGATGCAGTTTCGTAAATAGTTTACCATTCAAATTAGTTTGTTCTAATACATCCAACTTCGAGGCCcaatttactaaatatttagaatCAAGTACGACAAAAACATTCACTACTCTGAACCCTGTtactaatagaaataaatccCCGAAAAGTCTGATAAgtgataattacaaaaattacgaCGAAAATTATCAAGCTCAGCGTAAAGATGATTTCGCAAGCTATACACGAGAAGAGATTCTCAATATGTTTAAAGACTCGCCCGTCGCATCATTGCCTTACGAAGAGAACCAAAATCACAACGAAAAAAGACGCCATGTACGTAAAACGGATCCATCTAGACTTCATAAAAATTGGAACAACAGACCTTACGTAGACGTTAAACCTGGAGAGAAAGGTAGACAAAACTGTTTCATTTGCGGTAAAATAGATAACAACGTGGAGAAGTTGTATTTATTCGATAACGAGGACCAAAAGCTACATAGATGCACATCACCGAGAAATTATCCGACTCAACTGAAAATAATATGTGATCATTGTTTGGCTGAAAATTTTAAACCCAGTCGTATGAAAAGTCCCACACAATCACTTAGTTCTGACGAGTTCTTAGTCATTAAAAACAACCAGCAATTCATATTTCAGAAggttattgattttaaagttGCTCCAATTTCGGAAACCGTTGATAAAAGGGAACAAAACCTCGAGGATTCACAGGATAATGAGAAACTTGAATTTGTTAAAGTAGAAATAGGTTCCGACGGTGAAATTGTAACGAAATGTATTGATAATGATACTAGATCTTCAGACGATGTTATTATTGTGAAAGACGAGAAGAAAGAGAGTTCCAGTGATGttgaaattatagaaaatgaACCAGATATCGACGACCATATTATAGATAATTTGGAAGAAGCAGATGACGATGTTAAAGAGTTTTTAGGGAAATATCACTGCGATGATGAATCTGAGATTAAGGAATTAAAATGCAGGTTCTGTGACCGCATCTTTGAAGAAATCAATCAAGTGATAGAACATGGTGAAGAACACAAACATAACTTAGACGATGGAGAAGTATTCCCTTGCCCGTTGTGTGATTAcggttattctaattttaaatggtTAAAGGGGCATCTTAAAGCGGCCCATGATAAGACTAAAGTTACCGAAATAAAAGATGAAGGTGATATCGAAGGAGACAAAGATGTGGTAAAAACATCTCCGTCTTCGTCACCAGTCGCTAAGAGAACTAGAAGTGCAATAAAAAAGGTTGAAACGGAAAGCGAAAAAGaacggggggggggggggggggggggatcGACGTTGACTGTGAATACGGAAGTGAAGCAGGAATGTTTGGACAGCAGTGACGATGAAGCTATTTGGATCGTGCAGACTGTTGGCCACGAGCCATCCGAGCAGTTGGAGAACTTGCTGAAGGTGGCCACGGGCGAAGACAGAgatgaaaaaaatagaaagaaacataaatgtaacaaCTGCAGCCAAATATTTCCAACTGCGGAAAGCCTAATATCCCACAAATGTCGTCGCCGAGGACGCAAACGAAGAGTCCCTGCTAAAGATGATTCGATTTTACTCGTACCTTCTGAAGAGGACTTTCTGAGGAGAGCACAAGGAAGACCTAAACAAAAGCAACCAGGTGACGACAATGATTTGCTGGTTGttAGACCACGTAAAAGGAAGAACCGCGAGCCGACATCAGATCCTCAAATCGTTACATGTCACAACTGCAATGAATCTTTTACATCTAAAGTTAGACTCAAGTTTCACATGCAATTCCATGACGCAACCAATCTTTTGACCGCCGAGGGTCAATACGCGTGTCCGGAATGCGAAGGCGCACATTTCCCTACAGAAAGCGAGCTCTTCGATCACGTACATTTCCAGCATCATAAGCAAAAGCGTTGGCAATGTCCAGTAGAAGATTGTGGTAAAACTTTCTATCTTAGAGCAACATTAACAAAGCATAGTCGAACTCATACGGACACGCGACGTTACGTGTGCGTGACGTGTGGGAAACGATTTCTTGACAAGCAGACTCTTGATGAACATGGAGTTACACATCTTCAGATAAAGCCGTTCCAGTGTCACATTTGCTTCAAGCAATTGACACGTCGTTCTCGTCTGCGGATGCACCTCCGTGCGCACGAGGAGGAGCTGGCGCCGCGGCTGGTGCTGGTCTGCGCCGCGTGCGGCAGGGCCTTCCGGGACACTGAGGATGCACAGGATCACGCTAACAAATCAAAAGAGTGCATAGAACAGCTAAGTCCAGCTGTGAAAGAAGAGAACGAAGTAGCAGTACTACTGTCTCCGACCACTGGACTGGTCACACACACTGTCGCGGTTGTTGCGAAATCTCCACAAATGGAGTGCGGGCCGGAGGGGGACGCACTTCTGGCAACGCTCACAGACTTCGCTAAAATCATCATACGTGTGGTTGAGATTGAAAAGGCTTTCCGCTGCGAGTACTGTGAAGATGTTTTCTATTTAGAGGAAGCTCTGAACAGCCATCGAGTTATCCACAAAGGTGTTAAGAATCCATTCACCTGCCACATCTGTAAAGTCAGCTTCGCTACGTATTCCAGATGTACAACACACAAAACTACACACGGCTTTTACAAGCGTTCCCTCGCGGATTGCAAGAAAGCAGCAAAATGTCCAGGTTCCTCTGAAGCTGGGCCTGCTGCTACTGGTATTTTAGGTTATGGAGGATTTCCTGTCGTCAAACATTTCCTATGCGAGGATTGCGGCCGGTCGTATCTGCATTGGACGTATCTACAGGTTCATCGTCGTATGAAGCATGCTAATGAGAATTTTCTATACAAATGTAACCAGTGCGACCTCACCTTCCCTAACAGTTGGAGTGTGGCGTATCACAGAAAAAAGATGCACGGCAAAAGTGGACCCGAGGACGGCGGTGGTACCACAAAAATCGCTAGAGATGACTATAGGAAGAAGATGCACGGCAAAAGTGGACCCGAGGACGGCGGTGGTACCACAAAAATCGCTAGAGATGACTATAGGATACCCTGTCGGGATTGCAGCATGGTGTTGCCAAACAAAACAGCACTTTACGCTCATAGACAGAAGGAGCATAGTGATGTGACACTTTCTATGAGTGATGAACAAGGTGCTGACGCGCAAGTGCGTACGCACGCGCCGCTAGCGACCTCCTGCAGCAAGTGCGGACATAACTTCAATGAGCCTAGCGCTCTGCAGCGACATCTCAAAGAGGTACACGGACACGAGGGGGAGGCGCGGGGTGAGCGAGGTCGTGCCCACgcgtgtgcggtgtgtggCCGCGCATTCCGCTCCGCCTCCGTACGGAATGAACACCTGCGTGTCCACACTGGAGAGCGACCATACCCCTGTGATGTCTGCGGGGTTGCATTCCGACGTTCGACAGCAATGCGTAATCACCGGCTGATTCACTCCGGTGTACGAGCGTGGGCATGTGCGCGCTGTCCCAAGCGGTTCCGTATCCGCTCTGATCTGCGCACGCATATGCGACTCAAACATCCAACATATATGATCGTGTTTGAGGTAAGGGGAAACTCTTTCTGTCTGTATTTCCTCTGTAGCAATGGTAACTTCACTATTATAGCGAATTAG
Protein Sequence: MEPQLPPLILCMENMNGEEVSLSIGPNDDFQTFLDKAKSTLGFDVDLNSITGDQSVSLNENIYHYLLNSELNYQTDPQLGTENFQRTPEQGTHSPDGFVYVLDDGTQIRASQIHFDNEDPPLDLTAEQIPFVKYANDSADENEVDDQNIGNTKKINIVESPVKRWESRNSSPRCSFVNSLPFKLVCSNTSNFEAQFTKYLESSTTKTFTTLNPVTNRNKSPKSLISDNYKNYDENYQAQRKDDFASYTREEILNMFKDSPVASLPYEENQNHNEKRRHVRKTDPSRLHKNWNNRPYVDVKPGEKGRQNCFICGKIDNNVEKLYLFDNEDQKLHRCTSPRNYPTQLKIICDHCLAENFKPSRMKSPTQSLSSDEFLVIKNNQQFIFQKVIDFKVAPISETVDKREQNLEDSQDNEKLEFVKVEIGSDGEIVTKCIDNDTRSSDDVIIVKDEKKESSSDVEIIENEPDIDDHIIDNLEEADDDVKEFLGKYHCDDESEIKELKCRFCDRIFEEINQVIEHGEEHKHNLDDGEVFPCPLCDYGYSNFKWLKGHLKAAHDKTKVTEIKDEGDIEGDKDVVKTSPSSSPVAKRTRSAIKKVETESEKERGGGGGGGSTLTVNTEVKQECLDSSDDEAIWIVQTVGHEPSEQLENLLKVATGEDRDEKNRKKHKCNNCSQIFPTAESLISHKCRRRGRKRRVPAKDDSILLVPSEEDFLRRAQGRPKQKQPGDDNDLLVVRPRKRKNREPTSDPQIVTCHNCNESFTSKVRLKFHMQFHDATNLLTAEGQYACPECEGAHFPTESELFDHVHFQHHKQKRWQCPVEDCGKTFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICFKQLTRRSRLRMHLRAHEEELAPRLVLVCAACGRAFRDTEDAQDHANKSKECIEQLSPAVKEENEVAVLLSPTTGLVTHTVAVVAKSPQMECGPEGDALLATLTDFAKIIIRVVEIEKAFRCEYCEDVFYLEEALNSHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADCKKAAKCPGSSEAGPAATGILGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCDLTFPNSWSVAYHRKKMHGKSGPEDGGGTTKIARDDYRKKMHGKSGPEDGGGTTKIARDDYRIPCRDCSMVLPNKTALYAHRQKEHSDVTLSMSDEQGADAQVRTHAPLATSCSKCGHNFNEPSALQRHLKEVHGHEGEARGERGRAHACAVCGRAFRSASVRNEHLRVHTGERPYPCDVCGVAFRRSTAMRNHRLIHSGVRAWACARCPKRFRIRSDLRTHMRLKHPTYMIVFEVRGNSFCLYFLCSNGNFTIIAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00249890; iTF_01494497; iTF_01495207; iTF_01495950; iTF_01402882; iTF_00958155; iTF_01115870; iTF_01140377; iTF_01149797; iTF_01143304; iTF_01141871; iTF_01142591;
90% Identity: iTF_01140377;
80% Identity: -