Pgla002433.1
Basic Information
- Insect
- Papilio glaucus
- Gene Symbol
- ZNF526
- Assembly
- None
- Location
- scaffold:266190-286898[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.3 77 3.9 0.1 2 23 503 524 502 524 0.87 2 18 0.0026 0.16 12.3 0.1 1 23 534 557 534 557 0.95 3 18 0.061 3.7 8.0 1.4 2 20 692 710 691 711 0.94 4 18 0.03 1.9 8.9 3.8 2 23 776 797 775 797 0.95 5 18 2.3 1.4e+02 3.0 1.6 1 23 809 833 809 834 0.89 6 18 2.8e-05 0.0017 18.5 0.3 2 23 840 863 839 863 0.97 7 18 0.06 3.6 8.0 0.2 1 23 869 891 869 891 0.93 8 18 0.0019 0.11 12.8 3.3 1 23 897 919 897 919 0.98 9 18 2.2 1.3e+02 3.1 0.0 2 19 930 947 929 950 0.85 10 18 0.66 40 4.7 0.1 1 23 1022 1044 1022 1044 0.94 11 18 1.8 1.1e+02 3.4 7.2 1 23 1051 1073 1051 1073 0.95 12 18 0.0012 0.072 13.4 1.8 1 23 1114 1137 1114 1137 0.95 13 18 0.0029 0.17 12.2 0.8 1 23 1144 1167 1144 1167 0.98 14 18 0.053 3.3 8.2 0.1 2 23 1189 1211 1188 1211 0.95 15 18 0.00013 0.0082 16.4 1.0 2 23 1237 1259 1236 1259 0.94 16 18 0.0016 0.1 12.9 0.2 1 23 1271 1293 1271 1293 0.96 17 18 7.9e-05 0.0048 17.1 0.1 1 23 1299 1321 1299 1321 0.98 18 18 5.8e-05 0.0035 17.5 1.1 3 23 1329 1350 1327 1350 0.95
Sequence Information
- Coding Sequence
- ATGGAACAGCAACTTCCACCTCTAATACTTTGCATGGAGAACATGAATGGAGAAGAAGTATCATTTAGTATTGGACCTAATGATGATTTCCAAACCTTCCTGGATAAAGCCAAATCTATGTTAGGTTTCGATGTTGACATAAACTCGATTACTGGCGACCAATCTGTCTCATTAAATGAAAACATTTATCATTACCTCCTAAATTCTGAACTAAATTATCAAACTGATCCACAATTAGGTACAGAACATTTCGAACGTACACCAGAACAAGGTACGCACAGCCCTGATGGGTTTGTGTACGTTCTGGATGACGGAACACAAATCCGAGCCTCTCAAATACATTTCGATAACGAAGATCCTCCTTTAGATCTTACAGCGGAACAAATACCATTCGTTAAATACGCAAATGATAGCGCCGACGAAAATGAAGTCGAAGATCAAAGTATTGAGAATACTAAAAAAATTAACATAGTTGAAAGTCCTGTTAAACGTTGGGAAAGTAGAAATTCGAGTCCTAGATGCAGCTTCGTAAACAGTTTACCATTTAAACTTGTCTGTTCTAACACAACTAATTTCGAAGCCCAATTTACTAAGTATTTAGAATCAAGTACTACCAAAACCTTCACGACTTTGAATACTGTAACCAATAGAAATAAGTCTCCGAAAAGCCTTATTAATGATAATTATAAAAATTATGATGAAAATTATCAGACACAGCGTAACAAGGATGATTTCGCAAGTTATACACGTGAAGAAATTCTTAATATGTTTAAAGATTCTCCTGTCGCATCATTACCATACGAAGAAAACCAAAATCATAACGAAAAAAGACGTCATGTACGTAAAACTGATCCATCTCGGCTTCATAAAAATTGGAATAACAGACCCTACATAGACGTAAAACCTGGAGAGAAAGGAAGACAAAATTGTTTCATTTGTGGGAAAATTGATAACAACGTAGAAAAGTTGTATTTGTTTGATAACGAAGACCAAAAACTACATAGATGTACGTCCCCGAGAAATTATCCGACGCAACTGAAAATAATATGTGACCACTGTTTAGCTGAGAATTTCAAACCTAGTCGTATGAAAAGTCCTACGCAATCTCTAAGTTCAGACGAGTTCTTGGTCATAAAAAATAACCAACAATTCATATTTCAAAAGATAGTAGATTTTAAAGTGGCTCCAATTTCAGAAGCCGCAGATAAAAGAGAACTAAACCTTCTCGACGATCCTCAAGAGAACGAGAAACTTGAGTTTGTGAAGGTAGAAATAGGTTCTGATGGGGAAATCGTAACAAAATGTATAGACAATGATACTCGGTCTTCAGATGACGTTATCGTTGTAAAAGACGAGAAAAAAGATAGTTCCAGTGATGTTGAAATTATAGACAATGAGCCGGACATCGATGATCATATTATAGATAATTTGGAAGAAGCAGATGAGGACGTTAAGGAGTTTTTGGGGAAATATCACTGTGATGATAACACTGAGCTTAAGGAATTAAAATGCAGGTTCTGTGACCGCATCTTTGAAGAAATTAGCCAGGTGATGGAGCACGGTGAAGAGCACAAACATAACTTAGACGATGGTGAAGTATTCCCATGCCCGCTATGCGATTACGGTTATTCTAATTTTAAATGGTTAAAAGGACATCTTAAAGCAGCTCATGATAAGACAAAAACTGAAGTAGGCAAAGAGGAAGCTGATAACGAGGGAGACAAAAATGCGGCTACAACTTCTCCGTCTTCCTCTCCAGTTGCCAAGAGAACTAGAAGTGCCATTAAAAAGGTCGAAACAGGAAATGAAAAAGGTCTGGAAATGTTCATTGTTACAATTTCATATGGGTCTCCGGAGAAGATAGAAGGCACGAACAATATTACTACGAAACTTGAATCTAACGGGTCGACATTGACCGTGAACACTGAGGTGAAGCAGGAGTGCTTGGACAGTAGTGACGACGAGGCCATCTGGATCGTGCAGACCGTCGGCCACGAGCCCTCCGACCAGCTGGAGAACTTGCTTAAGGTGGCTACGGGTGAAGAGAAAGAAGGGAAAACGAGAAAGAAAAATAAATGTAATAATTGCAGCCAAATATTCCCTACTTCCGAGAGCTTAGTCTCCCACAAGTGTCCTCGCCGAGGAAGAAAGCGTAGGGGTCCGGCGAAAGACGACTCCGTCATACGCGTGCCGTCCGAAGAGGACTTTCTCAGGCGGGCGCAAGGGAGGCCGAGACAAAAGCAGCCGGGCGTGGACAATGATTTGCTGGTGGTTAGACCCCGTAAGAGAAAGACCCGCGAGCCGACCTCCGACCCGCAGATCGTCACTTGCCACAACTGCAACGAGTCGTTTACATCTAAAGTGAGGCTCAAGTTTCACATGCAATTCCACGACACGACCAACATGCTGACCGCCGAGGGTCAGTACGCGTGCCCGGAGTGCGAGGGCGCGCACTTCCCCACGGAGAGTGAGCTCTTCGACCACGTGCACTTCCAGCATCACAAGCAGAAGCGATGGCAGTGCCCCGTCGAGGATTGCGGGAAGACTTTCTACTTGAGAGCTACACTGACGAAGCACAGCCGCACGCACACGGACACGCGCCGCTACGTGTGCGTGACGTGCGGCAAGCGATTCCTTGATAAGCAGACTCTAGACGAGCATGGAGTTACACATCTGCAGATAAAGCCGTTCCAGTGCCACATCTGCCTGAAGCAGTTAACGCGTAGGTCGCGGCTGCGCATGCACCTGCGCGCGCACGAGGAGGAGCTCGCGCCGCGCCTCGTGCTGGTGTGCGCGGCGTGCGGTCGCGCCTTCCGAGACACCGGCGACGCTGAGGAGCACGCTACCAAATCAAAGGAGTGCGTGGAGCAGCTAAGTCCAACTGTTAAAGAAGAGAATGAAGTATCAGTTCTTCTCTCCCCAACCACCGGCCTGGTCACACAGACTGTTGCAGTTATTGCAAAATCCCCGCAAATGGAGTGCGGGCCGGAGGGCGACGCGCTGCTGGCTACGCTCACGGATTTCGCGAGGATTATTATACGCGTCGTCGAAATAGAGAAAGCGTTCCGGTGCGAGTATTGTGAAGATGTTTTCTATCTAGAGGAAGCTCTCAACGGTCACCGCGTTATACATAAGGGTGTCAAGAACCCCTTCACCTGTCACATATGCAAAGTCAGCTTCGCCACATATTCTAGATGCACCACGCACAAGACTACCCATGGCTTCTACAAGCGCTCGCTGGCTGACTGCAAGAAGGCGGCCAAGTGCCCCGGCTCGAGCGAAGCTGGACCGGCGGCCACTGGCATCCTGGGATACGGGGGCTTTCCTGTCGTTAAACACTTTTTATGCGAGGATTGCGGTCGTTCGTACCTGCACTGGACTTACCTCCAGGTGCACCGGCGCATGAAGCACGCCAACGAGAACTTCCTCTACAAGTGTAACCAGTGCGAGCTGACCTTCCCCAATAGTTGGAGCGTGGCGTATCATAGGAAGAAGATGCACGGGAAGAGCGGGCCCGAGGAAGGCGGAGGCACCACCAAGATCGCTAGAGATGATTACAGGATACCTTGCCGCGACTGCAGCATGGTGCTGCCAAATAAAACTGCACTTTATGCTCACAGACAGAAAGAGCATAGTGATGTGACGCTTTCCATGAGTGATGAACAAGGTACAGATTCGCAAGTACGTACCCACGCGCCGCTCGCTACGTCGTGCAGCAAGTGCGGGCACAACTTCAACGAGCCCAGCGCGCTGCAGCGGCATCTCAAGGAGGTGCACGGTCATGAGAGTGAGATGCGCGCGGGGCGGTCGCATGCGTGCGCGGTGTGCGGGCGCGCGTTCCGCTCGGCGTCCGTGCGCAACGAGCACCTGCGAGTACACACCGGCGAGCGCCCCTACCCCTGCGACGTGTGCGGCGTCGCCTTCAGACGGTCGACAGCGATGCGCAACCACCGTCTCATTCATTCGGGGGTGCGCGCGTGGGCGTGCAGCCGCTGCCCCAAGCGGTTCCGTATACGCTCCGACCTGCGCACGCACATGCGCCTCAAGCATCCCACCTACATGGTCGTCTTTGAAATGAAAGGCTTGAACCCGACATACGAAGAGATAATGCAGCACATCCGCGAACACAATATCACTCAGGGCCGTATCATCGAGATCACAAAAATGTCATTTGAAAAGGGTACAACCAGTATAGTGCCGACGACCGCGCGCGCGCTCTCGCTGCTCAGTCACGTGCCGCGCACGAAAATCACCTGCGAGCCGCCGACATCCGTCAATATTGATATGTTTCAACCGGCCCGCCGTGGCAGAGGCATCGCCAAGAATCCAAGAAGACCTAAAATCCTTCAAGGACCACATAGCGATGCTGAACTGGAGCCGAGTGCATACACCATGCCCATTGCATTCGATGCTAGTGGAGAGGAGTTACCAGAACTGAACGTTGAGTTATTAAGCGAAGCAGCGCTGCACGGCAACCAGGTGGTGCAGATTCAGCTCGACGATAACATATGGAATAAGACATAG
- Protein Sequence
- MEQQLPPLILCMENMNGEEVSFSIGPNDDFQTFLDKAKSMLGFDVDINSITGDQSVSLNENIYHYLLNSELNYQTDPQLGTEHFERTPEQGTHSPDGFVYVLDDGTQIRASQIHFDNEDPPLDLTAEQIPFVKYANDSADENEVEDQSIENTKKINIVESPVKRWESRNSSPRCSFVNSLPFKLVCSNTTNFEAQFTKYLESSTTKTFTTLNTVTNRNKSPKSLINDNYKNYDENYQTQRNKDDFASYTREEILNMFKDSPVASLPYEENQNHNEKRRHVRKTDPSRLHKNWNNRPYIDVKPGEKGRQNCFICGKIDNNVEKLYLFDNEDQKLHRCTSPRNYPTQLKIICDHCLAENFKPSRMKSPTQSLSSDEFLVIKNNQQFIFQKIVDFKVAPISEAADKRELNLLDDPQENEKLEFVKVEIGSDGEIVTKCIDNDTRSSDDVIVVKDEKKDSSSDVEIIDNEPDIDDHIIDNLEEADEDVKEFLGKYHCDDNTELKELKCRFCDRIFEEISQVMEHGEEHKHNLDDGEVFPCPLCDYGYSNFKWLKGHLKAAHDKTKTEVGKEEADNEGDKNAATTSPSSSPVAKRTRSAIKKVETGNEKGLEMFIVTISYGSPEKIEGTNNITTKLESNGSTLTVNTEVKQECLDSSDDEAIWIVQTVGHEPSDQLENLLKVATGEEKEGKTRKKNKCNNCSQIFPTSESLVSHKCPRRGRKRRGPAKDDSVIRVPSEEDFLRRAQGRPRQKQPGVDNDLLVVRPRKRKTREPTSDPQIVTCHNCNESFTSKVRLKFHMQFHDTTNMLTAEGQYACPECEGAHFPTESELFDHVHFQHHKQKRWQCPVEDCGKTFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHEEELAPRLVLVCAACGRAFRDTGDAEEHATKSKECVEQLSPTVKEENEVSVLLSPTTGLVTQTVAVIAKSPQMECGPEGDALLATLTDFARIIIRVVEIEKAFRCEYCEDVFYLEEALNGHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADCKKAAKCPGSSEAGPAATGILGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSVAYHRKKMHGKSGPEEGGGTTKIARDDYRIPCRDCSMVLPNKTALYAHRQKEHSDVTLSMSDEQGTDSQVRTHAPLATSCSKCGHNFNEPSALQRHLKEVHGHESEMRAGRSHACAVCGRAFRSASVRNEHLRVHTGERPYPCDVCGVAFRRSTAMRNHRLIHSGVRAWACSRCPKRFRIRSDLRTHMRLKHPTYMVVFEMKGLNPTYEEIMQHIREHNITQGRIIEITKMSFEKGTTSIVPTTARALSLLSHVPRTKITCEPPTSVNIDMFQPARRGRGIAKNPRRPKILQGPHSDAELEPSAYTMPIAFDASGEELPELNVELLSEAALHGNQVVQIQLDDNIWNKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01149010;
- 90% Identity
- iTF_01140377;
- 80% Identity
- -