Basic Information

Insect: Papilio gigon
Gene Symbol: -
Assembly: GCA_027563995.1
Location: JAODUI010000011.1:4911319-4926868[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.3 1.7e+02 3.1 0.1 2 23 501 522 500 522 0.84

2 16 0.028 2 9.2 3.8 2 23 635 656 634 656 0.95

3 16 2.2 1.6e+02 3.2 1.6 1 23 668 692 668 693 0.89

4 16 2.6e-05 0.0019 18.7 0.3 2 23 699 722 698 722 0.97

5 16 0.055 4 8.3 0.2 1 23 728 750 728 750 0.93

6 16 0.0097 0.7 10.6 3.4 1 23 756 778 756 778 0.98

7 16 1.9 1.4e+02 3.4 0.0 2 19 789 806 788 809 0.85

8 16 0.12 8.8 7.2 0.1 1 23 881 903 881 903 0.96

9 16 1.6 1.2e+02 3.6 7.2 1 23 910 932 910 932 0.95

10 16 0.0011 0.079 13.6 1.8 1 23 973 996 973 996 0.95

11 16 0.00075 0.054 14.1 0.8 1 23 1003 1026 1003 1026 0.98

12 16 0.049 3.5 8.4 0.1 2 23 1048 1070 1047 1070 0.95

13 16 0.00017 0.012 16.2 1.1 2 23 1096 1118 1095 1118 0.94

14 16 0.00076 0.055 14.1 0.4 1 23 1132 1154 1132 1154 0.96

15 16 7.3e-05 0.0052 17.3 0.1 1 23 1160 1182 1160 1182 0.98

16 16 0.00012 0.0085 16.6 0.7 3 23 1190 1211 1188 1211 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.3	1.7e+02	3.1	0.1	2	23	501	522	500	522	0.84
2	16	0.028	2	9.2	3.8	2	23	635	656	634	656	0.95
3	16	2.2	1.6e+02	3.2	1.6	1	23	668	692	668	693	0.89
4	16	2.6e-05	0.0019	18.7	0.3	2	23	699	722	698	722	0.97
5	16	0.055	4	8.3	0.2	1	23	728	750	728	750	0.93
6	16	0.0097	0.7	10.6	3.4	1	23	756	778	756	778	0.98
7	16	1.9	1.4e+02	3.4	0.0	2	19	789	806	788	809	0.85
8	16	0.12	8.8	7.2	0.1	1	23	881	903	881	903	0.96
9	16	1.6	1.2e+02	3.6	7.2	1	23	910	932	910	932	0.95
10	16	0.0011	0.079	13.6	1.8	1	23	973	996	973	996	0.95
11	16	0.00075	0.054	14.1	0.8	1	23	1003	1026	1003	1026	0.98
12	16	0.049	3.5	8.4	0.1	2	23	1048	1070	1047	1070	0.95
13	16	0.00017	0.012	16.2	1.1	2	23	1096	1118	1095	1118	0.94
14	16	0.00076	0.055	14.1	0.4	1	23	1132	1154	1132	1154	0.96
15	16	7.3e-05	0.0052	17.3	0.1	1	23	1160	1182	1160	1182	0.98
16	16	0.00012	0.0085	16.6	0.7	3	23	1190	1211	1188	1211	0.95

Sequence Information

Coding Sequence: ATGGAACCGCAGCTTCCACCGTTGATTCTTTGCATGGAGAATATGAATGGGGAAGAAGTATCACTTAGTATTGGACCCAATGATGATTTCCAAACCTTCTTGGACAAAGCCAAAACCACATTAGGCTTCGATGTAGACATCAACTCGATTACTGGCGACCAATCTGTATCATTAAACGAGAACATTTATCATTACTTGTTAAATTCTGAATTGAATTATCAAACTGATCCACAATTAGGTACTGAAAATTACCAACGTACTCCGGAACGAGGTGCACATAGTCCCGATGGGTTTGTGTACGTTTTGGACGACGGCACACAAATAAGAGCATCCCAGATACATTTTGACAATGAAGATCCACCTTTAGATCTGACAGCAGAACAAATACCATTCGTCAAGTACGCCAACGACAGCGCAGATGAAAATGATCCCGATGATAGAAGTGATGGGAATACAAAGAAAATAAACATAGTCGAAAGTCCAGTTAAACGTTGGGAAAGTAGAAATTCAAGTCCTAGATGTAGTTTTGTAAATAGTTTACCATTCAAACTCGTATGTTCCAACACGTCCAACTTCGAAGCTCAATTTACAAAATATTTAGAATCGACTACCACAAAAACATTCGCCACCCTTAATCCTGTTACCAACAGAAATAGGTCCCCTAAAAGTGTAATAAGCGATAATTATAATAATTACGATGATAATTATCAGACGCAGCGAAACAAAGATGATTTCGCAAGTTACACGCGTGAAGAAATCCTCAATATGTTCAAAGATTCGCCCGTCGCGTCATTGCCGTACGAAGATAATCAAAATCATAACGAAAAAAGACGGCATGTACGTAAAACTGATCCATCTCGACTTCATAAAAATTGGAATAATCGACCCTACGTTGACGTAAAACTAGGAGAGAAGGGAAGACAAAACTGTTTCATTTGTGGTAAAATAGATAATAACGTTGAAAAATTGTATTTATTCGATAACGAGGACCAAAAACTGCACAGATGTACATCGCCAAGAAATTATCCGACCCAACTAAAAATTATATGTGATCATTGTTTAGCTGAAAATTTTAAACCGAGTCGTATGAAGAGTCCAACGCAATCTCTCAGTTCCGACGAGTTCTTGGTTATAAAAAATAATCAACAATTCATATTTCAAAAGGTGATTGATTTTAAAGTAGCTCCGATTTCGGAAACTACCGATAAAAGGGTTCAAAACCTCGACGACGCACAAGACAATGATAAACTTGAATTCGTTAAAGTCGAAATAGGTTCTGATGGAGAAATAGTTACTAAATGTATTGACAATGATACTCGGTCGTCTGATGACGTGATTATTGTAAAAGACGAGAAGAAGGACAGTTCCAGTGACGTGGAAATAATAGAAAACGAACCTGACATTGATGATCACATAATAGATAATTTGGAAGATGCCGATGAAGATGTTAAAGAATTTTTGGGGAAGTATCATTGCGATGATGATGAAATTAAAGAATTGAAATGCAGGTTCTGCGACCGCATCTTCGAAGAAATCGACCAGGTGATTGACCATGGTGAAGAGCATAAACATAACTTAGATGATGGAGAAGTATTCCCTTGCCCGTTGTGTGATTATGTAATGACTGAGTATGGTAGTTGGTCTCCAAGTTTAGAATATCATTATAGCCAAATTTTCCCAACTGCGGAGAGTCTAATCTCCCACAAGTGTCGTCGCCGAGGACGGAAGCGTAGAGGTCCGGCGAAAGATGACGCGGTCATACTGGTTCCCTCTGAAGAGGACTTTCTTAGGAGAGCACATGGCAGACCTAAACAAAAGCAGCCAGGTGTCGACAATGATTTGCTGGTAATTAGACCTCGTAAACGAAAGAACCGTGAACCAACCTCCGACCCTCAGATCGTCACCTGTCACAACTGCAATGAGTCGTTCACATCTAAAGTTAGACTAAAGTTTCACATGCAATTCCACGATGCGACCAACCTTTTGACCGCCGAAGGTCAGTACGCTTGCCCCGAGTGCGAGGGCGCTCACTTCCCAACCGAAAGCGAGCTCTTCGACCACGTCCACTTCCAGCACCACAAGCAGAAACGCTGGCAGTGTCCTGTAGAAGATTGCGGCAAGACTTTCTATCTTAGAGCGACGCTAACAAAGCACAGCCGCACGCATACAGACACGCGTCGATATGTGTGCGTGACGTGTGGGAAACGATTCCTAGACAAGCAGACTCTTGACGAGCATGGAGTCACACATCTACAGATAAAGCCGTTCCAATGTCACATCTGCATGAAGCAGCTGACGCGGCGCTCCCGTCTGCGCATGCATCTGCGCGCGCACGAGGAGGAGCTCGCGCCGCGGCTAGTGCTCGTGTGCGCCGCGTGTGGCCGGGCCTTCCGCGACACCAATGACGCTCAGGAACATTCTATTAAATCCAAAGAATGCGTAGAGCAGTTAAGCCCGGCTGTGAAAGAAGAGAACGCAGTGTCAGTGCTGCTGTCCCCGTCCACCGGCCTCCTCACACACACTGTCGCCGTTGTTGCCAAATCCCCGCAAATGGAGTGCGGGCCGGAGGGCGAGGCGCTGCTGGCCACGCTCACGGACTTCGCCAAGATCATCACACGCGTCGTCGAGATTGAGAAGGCCTTCCGCTGCGAGTACTGTGAAGATGTTTTTTATTTAGAGGAAGCATTGAACAGTCACCGCGTCGTACACAAAGGTGTGAAGAACCCCTTCACCTGTCACATCTGTAAAGTCAGCTTCGCCACGTACTCCAGATGTACCACACATAAAACAACTCACGGTTTCTACAAGCGGTCGCTCGCGGACTGCAAGAAGGCCGCCAAGTGCCCCGGCGCGTGCGAGGCCGGGCCCGCCGCCACCGGCATCTTGGGTTACGGAGGATTTCCTGTCGTCAAACATTTCTTATGCGAGGACTGCGGACGGTCGTACCTGCACTGGACATACCTCCAGGTGCACCGGCGGATGAAGCACGCCAACGAAAATTTTCTATACAAATGTAACCAGTGCGATCTCACCTTTCCCAACAGTTGGAGCGTGGCATACCACAGGAAGAAGATGCATGGTAAGAGTGGCCCTGAGGACGGCGGCGGCACCACCAAGATCGCCAGGGACGACTACAGGATACCTTGTCGCGACTGCAGCATGGTGCTGCCAAACAAAACTGCGCTTTACGCTCATAGACAGAAGGAGCACAGCGATATGACACTTTCTATGAGCGACGAACAAGGTGCGGACGCGCAGGTGCGCACGCACGCGCCGCTGGCGACCTCTTGCAGCAAGTGCGGGCACAATTTCAACGAACCCAGCGCCTTGCAGCGTCATCTCAAAGACGTGCACGGGCACGAGGGGGAGGCGCGCGGCGATCGCGGACGCTCGCACGCGTGCGCGGTGTGCGGGCGCACCTTCCGCTCCGCCTCCGTGCGCAACGAGCACCTGCGCGTGCACACCGGCGAGCGGCCGTATCCGTGTGACGTCTGCGGGGTAGCCTTCCGAAGGTCGACAGCGATGCGCAACCACCGCCTGATCCACTCGGGGGTGCGCGCGTGGGCGTGCGCGCGCTGCCCCAAGCGCTTCCGCATACGCTCCGACCTGCGCACGCACATGCGACTCAAACATCCCACTTATATGGTCGTATTTGAGATGAAAGGTTTGAACCCCACATATGATGAAATAATGCAACACATACGCGACAACAACGTCACTCGGGGCCGCGTCGTGGAGATCACTAAAATGTCCTTCGAAAAGGGTACAACCAGTATAGTGCCGACGACAGCGCGCGCTCTGTCGTTACTAGGTCACGTGCCCCGTACTAAGATCACATGCGACCCGCCCGCGCCTGTTAATATAGtacagtcagaaccctgctcggtgttctaa
Protein Sequence: MEPQLPPLILCMENMNGEEVSLSIGPNDDFQTFLDKAKTTLGFDVDINSITGDQSVSLNENIYHYLLNSELNYQTDPQLGTENYQRTPERGAHSPDGFVYVLDDGTQIRASQIHFDNEDPPLDLTAEQIPFVKYANDSADENDPDDRSDGNTKKINIVESPVKRWESRNSSPRCSFVNSLPFKLVCSNTSNFEAQFTKYLESTTTKTFATLNPVTNRNRSPKSVISDNYNNYDDNYQTQRNKDDFASYTREEILNMFKDSPVASLPYEDNQNHNEKRRHVRKTDPSRLHKNWNNRPYVDVKLGEKGRQNCFICGKIDNNVEKLYLFDNEDQKLHRCTSPRNYPTQLKIICDHCLAENFKPSRMKSPTQSLSSDEFLVIKNNQQFIFQKVIDFKVAPISETTDKRVQNLDDAQDNDKLEFVKVEIGSDGEIVTKCIDNDTRSSDDVIIVKDEKKDSSSDVEIIENEPDIDDHIIDNLEDADEDVKEFLGKYHCDDDEIKELKCRFCDRIFEEIDQVIDHGEEHKHNLDDGEVFPCPLCDYVMTEYGSWSPSLEYHYSQIFPTAESLISHKCRRRGRKRRGPAKDDAVILVPSEEDFLRRAHGRPKQKQPGVDNDLLVIRPRKRKNREPTSDPQIVTCHNCNESFTSKVRLKFHMQFHDATNLLTAEGQYACPECEGAHFPTESELFDHVHFQHHKQKRWQCPVEDCGKTFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICMKQLTRRSRLRMHLRAHEEELAPRLVLVCAACGRAFRDTNDAQEHSIKSKECVEQLSPAVKEENAVSVLLSPSTGLLTHTVAVVAKSPQMECGPEGEALLATLTDFAKIITRVVEIEKAFRCEYCEDVFYLEEALNSHRVVHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADCKKAAKCPGACEAGPAATGILGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCDLTFPNSWSVAYHRKKMHGKSGPEDGGGTTKIARDDYRIPCRDCSMVLPNKTALYAHRQKEHSDMTLSMSDEQGADAQVRTHAPLATSCSKCGHNFNEPSALQRHLKDVHGHEGEARGDRGRSHACAVCGRTFRSASVRNEHLRVHTGERPYPCDVCGVAFRRSTAMRNHRLIHSGVRAWACARCPKRFRIRSDLRTHMRLKHPTYMVVFEMKGLNPTYDEIMQHIRDNNVTRGRVVEITKMSFEKGTTSIVPTTARALSLLGHVPRTKITCDPPAPVNIVQSEPCSVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01149010;
90% Identity: -
80% Identity: -