Basic Information

Insect: Troides oblongomaculatus
Gene Symbol: -
Assembly: GCA_029032895.1
Location: JARDWC010000438.1:1730380-1749589[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.2 3.7e+02 2.4 0.1 2 12 505 515 504 526 0.75

2 18 0.0084 0.74 10.9 0.1 1 23 536 559 536 559 0.95

3 18 0.011 0.98 10.5 2.2 1 21 689 709 689 710 0.94

4 18 0.0094 0.83 10.8 3.3 2 23 774 795 773 795 0.95

5 18 2.7 2.4e+02 3.0 1.6 1 23 807 831 807 832 0.89

6 18 3.3e-05 0.0029 18.5 0.3 2 23 838 861 837 861 0.97

7 18 0.07 6.1 8.0 0.2 1 23 867 889 867 889 0.93

8 18 0.0022 0.19 12.8 3.3 1 23 895 917 895 917 0.98

9 18 0.72 63 4.8 0.0 2 19 928 945 927 948 0.87

10 18 0.08 7.1 7.8 0.2 1 23 1020 1042 1020 1042 0.97

11 18 2.1 1.8e+02 3.4 7.2 1 23 1049 1071 1049 1071 0.95

12 18 0.0014 0.12 13.4 1.8 1 23 1112 1135 1112 1135 0.95

13 18 0.0033 0.29 12.2 0.8 1 23 1142 1165 1142 1165 0.98

14 18 0.04 3.5 8.8 0.1 2 23 1187 1209 1186 1209 0.95

15 18 0.0039 0.34 12.0 3.0 2 23 1235 1257 1234 1257 0.94

16 18 0.0019 0.17 12.9 0.2 1 23 1269 1291 1269 1291 0.96

17 18 9.2e-05 0.0081 17.1 0.1 1 23 1297 1319 1297 1319 0.98

18 18 7.7e-05 0.0067 17.3 0.6 3 23 1327 1348 1325 1348 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.2	3.7e+02	2.4	0.1	2	12	505	515	504	526	0.75
2	18	0.0084	0.74	10.9	0.1	1	23	536	559	536	559	0.95
3	18	0.011	0.98	10.5	2.2	1	21	689	709	689	710	0.94
4	18	0.0094	0.83	10.8	3.3	2	23	774	795	773	795	0.95
5	18	2.7	2.4e+02	3.0	1.6	1	23	807	831	807	832	0.89
6	18	3.3e-05	0.0029	18.5	0.3	2	23	838	861	837	861	0.97
7	18	0.07	6.1	8.0	0.2	1	23	867	889	867	889	0.93
8	18	0.0022	0.19	12.8	3.3	1	23	895	917	895	917	0.98
9	18	0.72	63	4.8	0.0	2	19	928	945	927	948	0.87
10	18	0.08	7.1	7.8	0.2	1	23	1020	1042	1020	1042	0.97
11	18	2.1	1.8e+02	3.4	7.2	1	23	1049	1071	1049	1071	0.95
12	18	0.0014	0.12	13.4	1.8	1	23	1112	1135	1112	1135	0.95
13	18	0.0033	0.29	12.2	0.8	1	23	1142	1165	1142	1165	0.98
14	18	0.04	3.5	8.8	0.1	2	23	1187	1209	1186	1209	0.95
15	18	0.0039	0.34	12.0	3.0	2	23	1235	1257	1234	1257	0.94
16	18	0.0019	0.17	12.9	0.2	1	23	1269	1291	1269	1291	0.96
17	18	9.2e-05	0.0081	17.1	0.1	1	23	1297	1319	1297	1319	0.98
18	18	7.7e-05	0.0067	17.3	0.6	3	23	1327	1348	1325	1348	0.95

Sequence Information

Coding Sequence: ATGGAACAGCAACTCCCTCCTTTAATCCTTTGTATGGAAAACCTGAGTGGAGAAGAAGTAACCCTTAGCATAGAACCCAATGATGATTTCCAAAGTTTTCTGGATAAAGCAAAGTCGACATTAGGTTTTGATGTCAATATTAACTCTATAACTGGTGACCAGTCCGTttcattaaatgaaaacatttatcATTACCTCTTAAATTCTGAATTAAATTTTCGGAATGATTCGcaattaaataatcaaaattaccCTCCGAAGTCAGACCAAGTTTCACAAAGCCCGGATGGTTTTGTTTACGTTCTTGACGACGGTACACAGATCCGTGCCTCTCAAATACATTTTGATAACGAAGATCCTCCGGTAGATTTGACGGCTGAAGAAATACCGTTTGTAAAATATGCAAATGATAGCGCAGATGAAAATGAAAATAGAGATTTAAATATTGaagacacaaaaaaaattaacataattgaaAGTCCCGTTAAACGATGGGTAAGCAGGAACTCTAGTCCAAAATCCAGCTTTGTCAATAGTTTACCCTTCAAACTTGTTTGTTCTAATACATCTAATTTCGAAGCacaatttactaaatatttgGAATCGAGCAATAACAAAACATACGCTACTCTAAACCCGGTTGTTAATAGAAACAGATCTCCTAGAagtttaattaaagataattacaaaaattatgacGACAGCTATCAAACCCAACGAAATAAAGATGATTTTGCAAGTTTTACCCGTGAGGAAATTCTTAATATGTTCAAAGACTCTCCGGTTACATCATTACCTTATGAAGAAAACCAAAGTTATAACGAAAAAAGACGCCATGTTCGCAAGACTGACCCGTCTCGGCTCCATAAAAATTGGAATAACCGGCCTTTACCTTACATAGATGTTAAACCTGGCGATAAAAGTAGACAGAATTGTTTTATATGCGGAAAAACCGATAATAACGTGGAAAAGTTATACTTGTTTGATAATGAGGATCAAAAAATACACCGTTGCACGTCACCGAGAAAATGTTCGACACAGCTTAAAATTATTTGTGATCACTGCTTAGCTGAAAATTTTAGACCTAGCCATATGAAAAGTCCTACGCAATCCCTTAGCTCAGATGAATACctggtaattaaaaataaccaacaatttatttttcaaaaggTAGTAGATTTCCAAGTAGCACAGATTGCAGATGTAACGGACAAAATAGAAACACGACATGTTAAAGAGCCACAGGAAAGTGAAAAATTGGAATTCGTGAAGGTTGAAATTGGTTCTGATGGAGAGATTGTTACGAAATGTATAGATAACGATACTCGGTCTTCGGATGATGTTGTTATTGTAAAAGATGAGAAAAAAGAAAGTTCCAGCGATGTCGAAATCATTGAAAATGAACCTGATATTGATGAAAACATTATAGATAATTTGGAAGACGCTGACGAAgaattaaaagaatttttaggGCTATATCAATGCAACGAAGCAAATAAACTTCAGGAATTAAAATGCAGGTTTTGTGATCGAGTCTTTGAAGAAGTAAACGGGGTGATAGACCATGGTGAAGAACACAAGCATATCTTAGACGACGGAGAATTATTCCCCTGTCCATTGTGCGATTATGGTTATGCTAATTTTAAATGGTTGAAAGGACATCTTAAAGCGGTGCATGATAAAGCGATACCATCTGAAGCTAAAAAGGAAACCTGTGAAGTCGATGGAGGTGGAGATGCCGCTCCCACATCCCCGACTTCATCTCCGGTAGCTAAGAGGACGAGAAGTGCTGTAAGGAAGGTCGATAACGAAAACGAAAAAGACCCAGacTCTACGGAAAAAACTACGGAAGGCGCAAATAATTTTACGACAAAACTTGAATCGAACGAATCTACGTTGACCGTGAAAACAGAAGTGAAACAAGAGTGCCTGGACAGCAGCGACGACGAGGCGATATGGATTGTACAGACCGTCGGCCACGAGGCGACCGAGCAGCTGGAGAACCTACTGAAGGTTGCTGGGgGTAACAATGAAGAAGACAAAGatgcgaactctagaaaaaaacACAAATGTGATAATTgcagTCAAATATTTCCCACATCCGACAGCCTGATCTCACACAAGTGTCGGCGGCGTGGCAGGAAACGTAGGGTGCAAAGTAAAGACGACTCGGTTATTTGTGTACCATCTGAAGAGGACTTTTTTAGGAGAGCTCAAGGACGACCTAGACAAAAACAGGAAGATGTAAACAATGATTTGCTTGTTGTAAGACCTCGGAAGAGAAGGAATCGGGAGCCGACCTCCGATCCTCAAATCGTAACCTGCCACGATTGCAACGAGTCCTTCACGTCCAAAGTTCGACTCAAATTTCATATGCAGTTCCATGATACCACAAATCTACTGACCGCCGACGGTCAGTACGCTTGCCCGGAATGCGAGGGCGCCCACTTCCCAACGGAGAGTGAACTCTTCGACCACGTGCACTTCCAGCATCACAAGCAGAAGCGCTGGCAGTGTCCAGTTGAGGACTGCGGGAAGACTTTCTATCTGAGAGCAACGCTGACGAAGCACAGCCGCACGCACACAGACACACGCCGCTACGTCTGTGTCACATGCGGGAAGCGATTCCTCGACAAGCAGACCCTGGACGAACACGGTGTCACGCATTTGCAAATAAAACCCTTCCAGTGCCACATCTGCTTGAAGCAGCTGACGCGCCGCTCGCGCCTGCGCATGCACTTGCGCGCGCATGAGGAGGAGCTCGCGCCGAGGCTGGTGCTCGTGTGCGCGGCGTGTGGGCGCGCCTTTAGAGACACCAGCGATGCTGAGGAGCATGCTAGTAAATCGAAAGAATGCATAGAGCAGCTAAGTCCAGCTGTTAAAGAAGAGAATGAAGTGTCCGTTCAGCTTTCGCCAACTAGTGGTCTGGTTACGCACACCGTGGCTGTTGTTGcgAAATCACCACAAGTGGACTGCGGACCGGAAGGTGAATCCCTGTTGGCAACCCTGACTGACTTCGCACGGATTATTATCAGAGTTGTTGAGATTGAGAAAGCCTTCCGATGCGAGTACTGTGAGGATGTTTTCTACTTAGAGGATGCGCTGAACAGCCACCGTGTCATGCACAAGGGCGTCAAGAATCCGTTCACTTGTCACATATGTAAAGTGAGCTTCGCTACTTACTCGAGATGCACAACTCATAAGACGACCCACGGCTTCTACAAGCGTTCGCTTGCCGACTGCAAGAAGTCCGCTAAGTCGCCCGGCACATCAGAGGCTGGACCGTCAGCAACCGGCATCTTAGGATATGGCGGTTTCCCTGTTGTCAAGCATTTCCTGTGCGAGGACTGCGGCAGGTCTTACTTACACTGGACGTACCTGCAGGTGCACCGGCGCATGAAGCACGCCAACGAGAACTTCCTCTACAAATGTAACCAGTGTGAACTCACTTTTCCAAACAGTTGGAGTGTCGCGTACCATAGAAAGAAGATGCATGGTAAGAGCGGACCAGAAGACGGCGGCGGCGCCACTAAAATAGCACGAGACGATTACAGAATACCATGTCGTGACTGTAGCGAAGTGTTGCCGAACAAAACAGCGCTCTATGCGCATCGCCAGAAAGAGCATAGTGACGTGACGCTTTCCATGAGCGATGAACAAGGCGCGGACTCGGCAGGACGCACGCACGCCACGCGCGCCACCTCGTGCTGCAAGTGCGGCCACAACTTCACAGAACCGAACGCCCTGCAGCGTCATCTCAAAGAGGTTCACGGGCACGAGGGCGAGGCTCGTGCGACGCGTGCGCATGCGTGCGCCGTGTGCGGGCGCGCGTTCCGCTCGGCGTCCGTGCGCAACGAGCATCTGCGCGTGCACACAGGGGAGCGACCCTACCCCTGCGACGTGTGCGGCGTCGCGTTCCGACGGTCAACCGCTATGCGCAACCACCGACTGATCCACTCGGGAGTGCGCGCGTGGGCGTGCCCGCGCTGTCCCAAACGCTTCCGCATCCGCTCCGACCTGCGTACGCACCTGCGCCTCAAGCACCCCACTCACATCGTCGTGTTTGAGATGAAGGGTTTGAACCCCACGTACGAGGAGATAATGCAGCACATTCGCGAGAACAACATCACCCAGGGTCGAATCATCGAGATCACTAAAATGTGTTTTGAGaagGGTACAACCAGCATAGTGCCAAACAGTGCGCGTGCGTTGTCGCTGCTTAGCGGGGTGCCGCGCACCAAGATAACCTGTGAGCCTCCGGCGCCTGTCAGTACTGaTATGTTCCAACCAGTGCGCAGAGGTAGGGGCATCGCCAAGAACCCTAGGCGGCCTAAGATACTGCAAGGTTCACACGAGGAGTCCGAGCTAGAGACGAGCACTTACCCCCTGCCTATTGACGGCAGTGGAGagGAGCTGGGGGAGCTGAACGTGCAGCTACTGATGCGCGAAGGCGCGCTGGCTCCAAGCCAAGTGGTTCAACTTCAGCTGGACGAGAGCATATGGAATAAACCCTCGCAATGA
Protein Sequence: MEQQLPPLILCMENLSGEEVTLSIEPNDDFQSFLDKAKSTLGFDVNINSITGDQSVSLNENIYHYLLNSELNFRNDSQLNNQNYPPKSDQVSQSPDGFVYVLDDGTQIRASQIHFDNEDPPVDLTAEEIPFVKYANDSADENENRDLNIEDTKKINIIESPVKRWVSRNSSPKSSFVNSLPFKLVCSNTSNFEAQFTKYLESSNNKTYATLNPVVNRNRSPRSLIKDNYKNYDDSYQTQRNKDDFASFTREEILNMFKDSPVTSLPYEENQSYNEKRRHVRKTDPSRLHKNWNNRPLPYIDVKPGDKSRQNCFICGKTDNNVEKLYLFDNEDQKIHRCTSPRKCSTQLKIICDHCLAENFRPSHMKSPTQSLSSDEYLVIKNNQQFIFQKVVDFQVAQIADVTDKIETRHVKEPQESEKLEFVKVEIGSDGEIVTKCIDNDTRSSDDVVIVKDEKKESSSDVEIIENEPDIDENIIDNLEDADEELKEFLGLYQCNEANKLQELKCRFCDRVFEEVNGVIDHGEEHKHILDDGELFPCPLCDYGYANFKWLKGHLKAVHDKAIPSEAKKETCEVDGGGDAAPTSPTSSPVAKRTRSAVRKVDNENEKDPDSTEKTTEGANNFTTKLESNESTLTVKTEVKQECLDSSDDEAIWIVQTVGHEATEQLENLLKVAGGNNEEDKDANSRKKHKCDNCSQIFPTSDSLISHKCRRRGRKRRVQSKDDSVICVPSEEDFFRRAQGRPRQKQEDVNNDLLVVRPRKRRNREPTSDPQIVTCHDCNESFTSKVRLKFHMQFHDTTNLLTADGQYACPECEGAHFPTESELFDHVHFQHHKQKRWQCPVEDCGKTFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHEEELAPRLVLVCAACGRAFRDTSDAEEHASKSKECIEQLSPAVKEENEVSVQLSPTSGLVTHTVAVVAKSPQVDCGPEGESLLATLTDFARIIIRVVEIEKAFRCEYCEDVFYLEDALNSHRVMHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADCKKSAKSPGTSEAGPSATGILGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSVAYHRKKMHGKSGPEDGGGATKIARDDYRIPCRDCSEVLPNKTALYAHRQKEHSDVTLSMSDEQGADSAGRTHATRATSCCKCGHNFTEPNALQRHLKEVHGHEGEARATRAHACAVCGRAFRSASVRNEHLRVHTGERPYPCDVCGVAFRRSTAMRNHRLIHSGVRAWACPRCPKRFRIRSDLRTHLRLKHPTHIVVFEMKGLNPTYEEIMQHIRENNITQGRIIEITKMCFEKGTTSIVPNSARALSLLSGVPRTKITCEPPAPVSTDMFQPVRRGRGIAKNPRRPKILQGSHEESELETSTYPLPIDGSGEELGELNVQLLMREGALAPSQVVQLQLDESIWNKPSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01149010;
90% Identity: iTF_00249890;
80% Identity: -