Nudd044094.1
Basic Information
- Insect
- Notocelia uddmanniana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905163555.1
- Location
- LR991072.1:14410953-14467714[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-14 1.7e-11 45.3 0.0 1 40 265 305 265 310 0.92 2 2 4.3e-18 2.9e-15 57.3 0.0 1 43 470 513 470 515 0.95
Sequence Information
- Coding Sequence
- ATGGTGAGTGAAATGGTTTTTACAGGTCTAGAACGGGTGGCAGAGGAGTTGATGGGTCGAAGAAAATGGAAACTCTACCAAGACGCGATCCTACCCAAGCGCGACGGCGAGCCTTCCAGCGACGAATCCATGCCTTCCACGGACCCCCCTCCAGCGTTAAAGATCAAAACCATAGAGCAGATAAACGAGGACAAGCAAGAAGACGGCAAAAGGCCAGAAACAATTTTGGAAAGACTGATCAAGACACCTGCAACTGTTCCAAAgGTGGAGATGGTGGAAGAACCGTCAGACTGGAAGCCTTCGGACAAATGTTACTTCTGCGTGGAGGGTGAGGGGGGCGGGGAGGCGCGGCCGGCCGGCGCGACGAGTCCAGCCTCGGAATCAGACAGTAGCTCTGTCTCGGGTGCGAAGAGTCCTGCTGCCGCGCCGCCGCAACTGCTGCAGCATCTACTGCAGATGCAGCTACAGGCACAGAGTCCGCAGGCCATTGCACAGCTGCAGCAAATGATCGCGACGTTGGCAGCGCTGGGTACGGGGCTGGTCCCGCCGGCGCTGTCTCAGGCGTGGCTGATGCAGCGGCTTACCCATCGGCTGCCCGACAGGCTACAAGACGTTGAGAAGGCGTCAGCCCCAAGCGCATCACCGACTTCCGCGGAACAGCCTCTAGATCTGAGCGCCAAGTCTACATCCAGCACTAGTGGAACACCTCCGCCGGACGCCAAGGACAACGCCAGATTGAAACGTGCGATAATCGAAGGCACGGCTGGCAACAGCAGCACGCGGCGGACTTACACCGAGGATGAACTCCAGTCAGCCCTCCGGGACATCCAGTCCGGACGTCTGGGCACCCGCCGAGCCGCCGTCGTGTACGGCATACCCCGCTCCACCCTCCGGAATAAAGTCAACAAGTTCGGCCTCGCGACGGAACAACCCGACTCCGACCCCGATTCCGACCCAGAACGACCCGACTCGCCGCCCTCCGTCATACTTAAAATACCAACATTCCCACCCCCAGACGATAAAAGCCCATCGCCTGCAACCCCTGCCACTCCAGTCGCTCCTGTTACCCCTCTCTTACCTCCACAACCGCCGCTCAACACGCCCTCCCCACTCCTCCTCCCCGCGTCAGTTTTCGCTGACCCCCCATCTTCCCAGCATCTCTTCACGTCGCTGAGCGACGTCATAGCCAAGAGTATAAGTCAGAAGTTCCAACAGCCACTGGAACGGCCTCACCAGGACCTAAACTTTATGCGCCATCAGGATAGACACGTATCCGTCATTAAAACACAACCAGAAAACTCTAGGAACTTCTCAGCACCGAGCAACTCTCGAGTCCCTACGAACAACAATGGACAACCCGCCACCGGCAAAGGGACTAGACCTAAGAGAGGCAAATACAGAAACTACGATAGAGACAGTCTTGTTGAGGCGGTAAAAGCGGTTCAGAGAGGAGAGATGTCAGTTCATCGTGCTGGTTCATACTACGGCGTCCCGCATTCGACGCTTGAGTATAAGGTGAAAGAGCGGCATTTGATGAGGCCGCGCAAGCGCGAGCCGAAGCCACCTCAGGACGTGAAGCCGCAGCCGCCAAAACCACCCCAACCGAAGCCCATGACCAAGCCGTTTACTAATGGCCTCAACGGGCCCGAGACACCCGGTTATCCGCCAAGCTACTTCTGGCCGGGGGCTGGTTTCCCCGCCCCACCCGCGCCGGATCTCTACGCATCGCATATGATGCGTCGGCTGCGGGAAGAAGCGCCGCCGCCGGCGAACGGGTCTTTCCTCGAAGGAATTATTCGGTCGAGTTTGGAGAGGCCGGGAGCGGCGCTGCTGCAGCGGTTGACGGGAGAGCCGCGGCCACCAGCGCCTAACGCGGACGCGCCAAGTCTGCTGCGGCGGTTGGCGGGCGCGGAAGAGGAAGGACCTCCAGCAAGACGAGCTCGCATCGACTCCTCCGACCGACAACTCGCCGCCGAGATGCGGGAAGCGGTCCAGCGGCTCCGAGCGGATAAAATGCGGCCCCGCAACGGTACCCCGACGCCGCCCGCGTGCGGGGCGCTGTCTCCCCCGCCTCCCCCTGCGCCGCCCGCCGCACCGCCCGACCGCGCCTAG
- Protein Sequence
- MVSEMVFTGLERVAEELMGRRKWKLYQDAILPKRDGEPSSDESMPSTDPPPALKIKTIEQINEDKQEDGKRPETILERLIKTPATVPKVEMVEEPSDWKPSDKCYFCVEGEGGGEARPAGATSPASESDSSSVSGAKSPAAAPPQLLQHLLQMQLQAQSPQAIAQLQQMIATLAALGTGLVPPALSQAWLMQRLTHRLPDRLQDVEKASAPSASPTSAEQPLDLSAKSTSSTSGTPPPDAKDNARLKRAIIEGTAGNSSTRRTYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLATEQPDSDPDSDPERPDSPPSVILKIPTFPPPDDKSPSPATPATPVAPVTPLLPPQPPLNTPSPLLLPASVFADPPSSQHLFTSLSDVIAKSISQKFQQPLERPHQDLNFMRHQDRHVSVIKTQPENSRNFSAPSNSRVPTNNNGQPATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVKPQPPKPPQPKPMTKPFTNGLNGPETPGYPPSYFWPGAGFPAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTGEPRPPAPNADAPSLLRRLAGAEEEGPPARRARIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPACGALSPPPPPAPPAAPPDRA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00009922; iTF_01464086; iTF_01245858; iTF_01135684; iTF_00657064; iTF_01463178; iTF_00289549; iTF_01134711; iTF_00772799; iTF_00659382; iTF_00658279; iTF_00660231; iTF_00656012; iTF_00148407; iTF_00149300; iTF_00680443;
- 90% Identity
- iTF_00660231;
- 80% Identity
- -