Enis003861.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- mbr-1_1
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000015.1:1226069-1276382[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-15 8.1e-12 45.1 0.0 1 39 258 297 258 303 0.92 2 2 6e-19 1.3e-15 57.3 0.0 1 43 462 505 462 507 0.95
Sequence Information
- Coding Sequence
- ATGGGTCTAGAACGGGTGGCAGAGGAGTTGATGGGTCGAAGAAAATGGAAACTCTATCAAGACGCGATCTTACCCAAGCGCGACGGAGAGCCTTCCAGCGACGAGTCCATGCCTTCCACGGACCCCCCTCCAGCGTTAAAAATCAAAACCATAGAGCAGATAAACGAGGACAAGCAAGAAGACGGGAAAAGGCCAGAGACGATATTGGAAAGACTGATCAAGACACCTGCCACTGTCCCAAAGGTGGAGATGGTGGAAGAGCCGTCAGACTGGAAGCCTTCGGACAAATGTTACTTCTGCGTGGAGGGTGAGGGCGGCGGGGAGGCGCGGCCGGGCGGTGCGGCGAGTCCCGCCTCAGAGTCGGACAGTAGTTCTGTCTCCGGTGCGAAGAGTCCAGCCGCCGCGCCGCCGCAGCTGCTGCAGCACCTACTTCAAATGCAGCTGCAGGCGCAGAGTCCGCAGGCCATTGCGCAGCTGCAGCAGATGATCGCGACGCTGGCGGCGCTGGGCACGGGGCTGGTCCCACCAGCACTGTCGCAGGCGTGGCTGATGCAGCGGCTAACCCATCGGATGCCCGACAGGCTCCAAGACGTGGAGAAGGCATCAGCGCCAAGCGCCTCCCCGACCTCAGCAGAGCAGCCTCTGGATCTCAGCGCCAAGTCTACATCCAGCACGAGTGGAACACCTCCGCCTGACGCCAAGGACAACGCCAGATTGAAACGCGCTATAATCGAAGGTGCGGCCGGCAACAGCAGCGCGCGGCGGACTTACACCGAGGACGAGCTCCAGTCAGCCCTCCGAGACATCCAGTCCGGCCGCCTGGGCACGCGCCGCGCCGCCGTCGTATACGGCATACCCCGCTCCACCCTCCGCAACAAAGTCAACAAGTTCGGCCTCGCGGCGGAACCCGCCGACTCCGATCCTGACTCCGACCCCGAACGACCAGACTCGCCGCCCTCCGTCATCCTTAAAATACCAACATTCCCACCTCCGGATGACAAGAGCCCGTCGCCAGCGACTGCCGCTCCAGTCGCTCCCGTCACCCCAATCTTACCTCCTCAACCACCGCTCAACACGCCATCCCCGCTTCTGCTCCCCGCGTCAGTCTTCGCTGACCCGCCATCGTCCCAACACCTCTTCACGTCGCTGAGCGACGTCATAGCCAAAAGTATAAGTCAGAAATTCCAGCAGCCGCTGGAACGGCCGCACCAGGATCTCTCCTTCATGCGCCATCAGGACAGGCACGTATCCGTCATTAAAACTCCACCGGACAACGCTAGAAATTACTCAGTCCCGAGCAACTCACGAGCGCCTACGAATAACAACGGACAACCCGCTACCGGCAAAGGGACTAGACCTAAGAGAGGAAAATACAGAAACTACGATAGGGACAGTCTCGTCGAAGCAGTTAAAGCGGTTCAGAGAGGAGAGATGTCGGTTCATCGCGCCGGTTCGTACTACGGCGTCCCGCATTCGACGCTCGAGTATAAAGTCAAAGAGCGGCATCTGATGAGGCCGCGCAAACGCGAGCCGAAGCCTCCTCAGGACGTGAAGCCCCAACCGCCAAAGCCGCCGCCCCCTAAGCCGATGAGCAAGCCGTTCACCAACGGCCTCAACGGGCCCGAGACGTCCGGCTACCCACCGAGCTACTTCTGGCCGGGGGCCGGTTTTCCCGCCCCGCCCGCGCCGGACCTCTACGCGTCGCATATGATGCGTCGACTGCGGGAGGAGGCGCCACCGCCGGCGAACGGGTCCTTCCTCGAGGGGATCATCAGGTCCAGCTTGGAGCGGCCGGGCGCGGCGCTGCTGCAGCGGCTGACGGGGGAGCCGCGGCCGCCGGCGCCGAGCGCGGACGCGCCGAGCCTGCTGCGGCGGCTGGCGGGCGGCGACGAGGACGGCCCGCCGGCGCGGCGCGCGCGCATCGACTCCTCCGACCGGCAGCTCGCCGCCGAGATGCGCGAGGCGGTGCAGCGGCTGCGAGCGGACAAGATGCGGCCCCGCAACGGCACCCCGACGCCGCCCGCGTGCGGGGCGCTGTCCCCCCCGCCGCCCCCCGCGCCGCCCGCCGCGCCGCCCGACCGCGCCTAG
- Protein Sequence
- MGLERVAEELMGRRKWKLYQDAILPKRDGEPSSDESMPSTDPPPALKIKTIEQINEDKQEDGKRPETILERLIKTPATVPKVEMVEEPSDWKPSDKCYFCVEGEGGGEARPGGAASPASESDSSSVSGAKSPAAAPPQLLQHLLQMQLQAQSPQAIAQLQQMIATLAALGTGLVPPALSQAWLMQRLTHRMPDRLQDVEKASAPSASPTSAEQPLDLSAKSTSSTSGTPPPDAKDNARLKRAIIEGAAGNSSARRTYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLAAEPADSDPDSDPERPDSPPSVILKIPTFPPPDDKSPSPATAAPVAPVTPILPPQPPLNTPSPLLLPASVFADPPSSQHLFTSLSDVIAKSISQKFQQPLERPHQDLSFMRHQDRHVSVIKTPPDNARNYSVPSNSRAPTNNNGQPATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVKPQPPKPPPPKPMSKPFTNGLNGPETSGYPPSYFWPGAGFPAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTGEPRPPAPSADAPSLLRRLAGGDEDGPPARRARIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPACGALSPPPPPAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01072366;
- 90% Identity
- iTF_00656012;
- 80% Identity
- -