Talt006184.1
Basic Information
- Insect
- Tortricodes alternella
- Gene Symbol
- Mblk-1
- Assembly
- GCA_947859335.1
- Location
- OX401988.1:3137968-3163775[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-15 2.1e-12 46.8 0.0 1 39 179 218 179 223 0.93 2 2 1.1e-18 9.5e-16 57.6 0.0 1 43 389 432 389 434 0.95
Sequence Information
- Coding Sequence
- ATGCTCACTCAATTTAAGCAAGTAACAAACTATAGTCTATTCATTTCTTACGCTAATCAAAATGTCTTCAATAAGTTAAATGGTTCAAATGACGTGTTGTTACAGAGTCCCGCCTCCGAGTCGGACAGCAGTTCGGTGTCCGGCGCTCAAAGTCCTGCGGCTGCACCGCCGCTGTTGCAGCACCTGCTACAGTTACAGTTGCAGGCGCAGTCGCCGCAGGCCATTGCACAGCTGCAGCAGATGATCGCAACCCTGGCAGCACTGGGTACGGGGCTAGTGCCGCCGGCGTTGTCGCAGGCGTGGCTCATGCAGCGGCTCGGCCATGCACGGCTACCAGATAGGCTACAAGATGTGGAAAAGGTGTCAGCCCCAAGTGCGTCACCGACCTCAGCTGAGCAGCCTCTGGATCTCAGCGCCAAGTCCACCTCCAGCACCAGTGGCACGCCGCCTCCTGATGCCAAGGATAACGCCAGATTGAGACGCGCGATAGTAGAAGGCTCGGGCGCCAGTAATAGCGGCACCCGTCGCACCTACACCGAGGACGAGCTGCAATTAGCCCTTCGCGATATCCAGTCGGGGCGGCTGGGCACGCGCCGGGCTGCAGTCGTGTACGGCATTCCACGCTCCACCCTACGCAACAAAGTCAACAAGTTCGGGCTCACTGCGGATCCACCCGACTCCGAGCCCGACTCCGACCCCGAGCGCCCCGACTCCCCGCCCTCCGTCATACTGAAAATACCCACGTTCCCGCCCCCCGACGACAAGAGCCAGTCACCCGCAACGCAAGCAACCCCCGTCGCTCCCGTCACCCCATTATTAAGCAAGAAAGCGCCGGTCACGCAGTCGTCCTCACTCTTTCTGCCCGCGTCAGTCTTCGCCGATCCACCTTCGACCCAGCACCTGTTCACGTCGCTGTCGCTAAGCGACGTCATAGCCAAGAGCATCAGCCAGAAGTTCCAGCAGCCGCTGGACCGGCCGCACCAGCAGGCCGAGCTGGCTTTCATGCGCCACCAGCAGGACAGACACGTCTCCGTCATCAAAACTCCACCAGATAACTCTAGGAACTTTTCGGCCCCGAGCAACTCCCGCGCTCCGACGAACAACAACGGCCAGCCCGCAACAGGTAAGGGCACCAGACCGAAGAGGGGGAAGTATAGGAACTACGACCGGGATAGTCTCGTGGAAGCGGTGAAGGCGGTGCAGCGGGGGGAGATGTCGGTGCACCGCGCGGGCTCTTACTACGGTGTGCCGCACTCCACGCTGGAGTACAAGGTCAAGGAACGGCATTTAATGCGGCCGCGTAAACGCGAGCCGAAGCCTCAGCAGGACGTGAAACCGCAGCCACCGAAGCCTCCGCTGCCGAAGCCGATGAGCAAGCCGTTCACGAACGGCCTAAACGGCCCAGAGACTCCCGGGTACCCTCCGAGCTATTTCTGGGCGGGGGCAGGTTTCCCAGCGCCGCCCACGCCGGACCTGTACGCGTCGCACATGATGCGTCGGCTCCGCGAGGAGGCGCCGCCGCCGGCCAACGGGTCGTTCCTCGAAGGGATCATCAGGTCGAGCCTGGAGCGGCCGGGGGCGGCGCTGCTGCAGCGGCTGACGAGCGAGCCGCGCGCCGCGGCGCCCGCCAGCGAGGCGCCGAGCCTGCTGCGGCGGCTGGCGGGCGAGGAGGAGGGCCCGCCGGCGCGGCGCGCGCGCATCGACAGCTCGGACCGCGCGCTGGCCGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGCCCGCGCAACGGCACGCCCACGCCGCCGCCGCCGCCGCCCGCCGCGCCGCCCGACCGCGCCTAG
- Protein Sequence
- MLTQFKQVTNYSLFISYANQNVFNKLNGSNDVLLQSPASESDSSSVSGAQSPAAAPPLLQHLLQLQLQAQSPQAIAQLQQMIATLAALGTGLVPPALSQAWLMQRLGHARLPDRLQDVEKVSAPSASPTSAEQPLDLSAKSTSSTSGTPPPDAKDNARLRRAIVEGSGASNSGTRRTYTEDELQLALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLTADPPDSEPDSDPERPDSPPSVILKIPTFPPPDDKSQSPATQATPVAPVTPLLSKKAPVTQSSSLFLPASVFADPPSTQHLFTSLSLSDVIAKSISQKFQQPLDRPHQQAELAFMRHQQDRHVSVIKTPPDNSRNFSAPSNSRAPTNNNGQPATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDVKPQPPKPPLPKPMSKPFTNGLNGPETPGYPPSYFWAGAGFPAPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTSEPRAAAPASEAPSLLRRLAGEEEGPPARRARIDSSDRALAAEMREAVQRLRADKLRPRNGTPTPPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01072366;
- 90% Identity
- -
- 80% Identity
- -