Pcor021179.1
Basic Information
- Insect
- Pandemis corylana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949127965.1
- Location
- OX421872.1:3036309-3054392[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-15 8.9e-12 45.2 0.0 1 38 151 189 151 195 0.94 2 2 1.1e-18 1.1e-15 57.7 0.0 1 43 357 400 357 402 0.95
Sequence Information
- Coding Sequence
- atgccttcggaggcagctgttcagagcCCCGCGTCGGAGTCTGACAGCAGTTCGGTGTCGGGCGCCAAGAGCCccgccgcggcgccgccgctgctgcagcacCTTCTGCAGCTGCAACTGCAGGCGCAGTCGCCACAGGCCATAGCACAGCTGCAGCAGATGATAGCTACACTGGCGGCCCTTAACACGGGCCTGGTCCCGCCGGCGCTCTCCCAAGCTTGGCTCATGCAGAGGCTCACGCATGCGCGTCTACCTGATAGGCTTCAAGATGCAGAGAAGGTATCAGCTCCGAGCGCGTCTCCGACGTCCGCGGAACAGCCTCTAGATCTCAGCGCGAAGTCTACCTCCAGCACCAGCGGTACCCCACCCCCTGACAGCAAGGATAACAGATTGAAACGCCCTCTGACGGACGGCGCCAGCGCAGGCAACAGCGGGGCGCGGCGCACCTACACAGAGGACGAGCTCCAATCCGCCCTCCGCGACATCCAGTCCGGCCGACTCGGCACCCGCCGCGCCGCGGTCGTCTACGGCATTCCCCGCTCTACCCTCCGCAATAAAGTCAACAAGTTCGGCCTCGCCGCTGACCCCCCCGACTCTGACCCTGACTCCGACCCCGAACGACCCGACTCCCCACCCTCCGTTATCCTCAAAATACCAACCTTCCCACCCCCAGACGACAAATCTCCATCGCCCGCTACTCCTGTCGCGCCTGTCACTCCAATCTTACCGCCGCAACCGCAGCTCTCGCAATCTTCACAACTGTTGTTACCGGCGTCAGTCTTCGCTGATCCGCCTTCCACGCAGCATCTCTTCACGTCGCTCAGCGATGTTATAGCGAAGAGCATAAGCCAGAAGTTCCAACAGCCGCTCGACCGACCGCATCAACAGGCTGAACTGGCCTTCATGCGGCATCAGCAAGACAGACATGTGTCCGTCATCAAAACACCGCCGGATAATTCTAGAAACTTCTCGGCTCCGAGCAACTCGCGCGCTCCTCCGATGAACAACAACGGGCAGCCCGCGACCGGAAAAGGCACCAGACCAAAGAGAGGGAAGTACAGGAACTACGACAGAGATAGTTTAGTGGAGGCGGTGAAAGCGGTGCAGCGGGGCGAGATGTCGGTCCATCGCGCCGGTTCGTACTACGGCGTGCCGCACTCTACATTGGAGTATAAAGTCAAAGAGCGGCATCTGATGCGGCCTCGTAAACGCGAGCCAAAGCCTCCACAGGACGTGAAGCCGCAGCCACCTAAGCCGCCGCCACCGAAGCCGATGGGGAAACCTTTCAGTAACGGCATGAACGGGCCGGAAACTCCGGGGTATCCTCCGAGCTACTTCTGGGCGGGGGGTGGTTTCCCGGCGCCGCCCGCTCCGGATTTGTACGCGTCGCACATGATGCGGCGTCTGCGCGAGGAGGCACCGCCGCCGGCCAACGGGTCGTTCCTCGAGGGGATCATCCGGTCGAGCCTGGAGCGGCCGGGTGCGGCGCTACTGCAGCGGCTGACAGAGCCGCGCGCGGTGGCAGGCGAAGCGCTACTGCGGCGGCTGGCGGTCGATGACGAGCcgccagcgcggcgcgcgcgcgtggaCAGCTCAGACCGCGCGCTGGCGGCCGACATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGCCCGCGCAACGGCACGCCCACGCCGCcacccgcgccgcccgccgcgccgcccgaccGCGCCTAG
- Protein Sequence
- MPSEAAVQSPASESDSSSVSGAKSPAAAPPLLQHLLQLQLQAQSPQAIAQLQQMIATLAALNTGLVPPALSQAWLMQRLTHARLPDRLQDAEKVSAPSASPTSAEQPLDLSAKSTSSTSGTPPPDSKDNRLKRPLTDGASAGNSGARRTYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLAADPPDSDPDSDPERPDSPPSVILKIPTFPPPDDKSPSPATPVAPVTPILPPQPQLSQSSQLLLPASVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHQQAELAFMRHQQDRHVSVIKTPPDNSRNFSAPSNSRAPPMNNNGQPATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVKPQPPKPPPPKPMGKPFSNGMNGPETPGYPPSYFWAGGGFPAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTEPRAVAGEALLRRLAVDDEPPARRARVDSSDRALAADMREAVQRLRADKLRPRNGTPTPPPAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01072366;
- 90% Identity
- iTF_01135684; iTF_00462314; iTF_00156176; iTF_00325305;
- 80% Identity
- -