Tvir022648.1
Basic Information
- Insect
- Tortrix viridana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963241965.1
- Location
- OY725194.1:5489116-5522265[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-15 6.8e-12 45.6 0.0 1 42 282 324 282 327 0.92 2 2 1.1e-18 1.5e-15 57.3 0.0 1 43 487 530 487 532 0.95
Sequence Information
- Coding Sequence
- atggGTCTAGAACGGGTGGCAGAGGAGTTGATGGGTCGCCGAAAATGGAAACTATACCAAGACGCGATCCTACCAAAACGGGAGGGCGAACAATCCAGCGACGACTCCATGCCCTCCACAGATCCTCCTCCGGCCCTCAAGATCAAGACCATAGAGCAGATCAACGAGGACAAGCCAGAGGAGCGGCGGGAGACAATCCTGGAGAGTCTGATCAAGAGGCCAGCGACAGTACCCAAGGTGGAAATGGTGGAGGAGCCCACAGATTGGAAGCCGTCGGAGAAGTGTTATTTCTGTGTGGATGGTGAGACCGCTGAGAGGACGGGGGCAGCGAGTCCTGCGTCAGAGTCGGACAGCAGCTCAGTGTCAGGGCCCGCGCTGTGTAAGAGCCccgccaccgcgccgccgcTATTGCAGCATCTGTTGCAGCTACAGTTGCAGGCGCAGTCACCGCAGGCTATTGCTCAGCTGCAACAGATGATAGCGACGCTGGCGGCACTGGGCACGGGGCTGGTGCCGCCAGCGCTGTCGCAGGCCTGGCTGATGCAGCGGCTCAGTCACGCGCGCCTGCCCGACAGCACGCTTGAAACATTCCAGAGTCCGCGTGATTCTGCTTATGGTTCTGGCAAACCTCATGGTCCTCTCTCCCCCAGGCTCCAAGATGCGGAGAAGGTGGCAGCCCCGGGCGCGTCACCCACCTCCGCAGAGCAGCCCCTGGACCTCAGCGCCAAGTCCACCTCCAGCACCAGCGGCACCCCCCCGCCCGATGCCAAGGATACCGCCAGATTGAAGCGCGCTATGGTTGACGGTGCAGGCGCCGGAAACAGCAGCACACGGCGCACCTACACGGAAGACGAGCTCCAGTCAGCACTGCGGGACATCCAGTCCGGCCGGCTGggcacgcgccgcgccgccgtcgTCTACGGCATCCCGCGCTCCACCCTGCGCAACAAAGTCAACAAGTTCGGCCTCACCGCCGAGCCCCCTGACTCCGACCCTGACTCAGATCCCGAACGACCCGATTCTCCCCCCTCCGTCATACTAAAAATACCAACATTCCCGCCCCCTGACGACAAAAGCCCATCCCCCGCGACACCTGCCACACCAGTCGCCCCCGTAACACCGCATTTGCCGCAGGCACAGCTCCAGCCCTCCCTTCTCCTGCCTGCTACGGTCTTTGCTGATCCGCCGTCTACTCAGCACCTGTTCACTTCACTCAGTGACGTCATAGCCAAGAGCATCAGCCAGAAGTTTCAGCAGCCGCTGGAACGGCCGCACCAACAGGCGGAATTAGCGTTCATGCGCCACCAGCAGGACAGACACGTGTCCGTCATTAAAACTCCTCCGGAAAATTCTAGAAACTTCTCAGCCCCGAGCAACTCCCGCGCTTCGATGAATAACAACGGCCAGCCCGCTACAGGAAAAGGCACCAGACCGAAGAGGGGGAAGTATAGGAATTACGACAGGGACAGTCTCGTTGAAGCAGTGAAGGCGGTACAGCGGGGGGAGATGTCGGTGCACCGCGCGGGCTCGTATTACGGCGTGCCTCACTCTACCCTGGAGTACAAGGTGAAGGAGCGACACCTGATGCGGCCTCGCAAGCGCGAGCCTAAGCCTCAACAGGACATGAAGCCGCAGCCACCGAAGCCTCCGCCACCGAAGCCGATGAGCAAGCCGTTCACTAACGGGATGAACGGGCCGGAGACGCCCGGGTACCCTCCGAGTTATTTCTGGGCCGGCGCGGGGTTCCCGGCACCGCCCGCGCCCGATCTGTACGCGTCGCATATGATGCGTCGGCTGCGCGAGGAGGCGCCGCCGCCGGCTAACGGCTCCTTCCTGGAGGGTATCATTCGCTCCAGTCTGGAGCGGCCCGGGGCGGCGCTGCTGCAGCGATTGTCTGGCGAGGCGCGCGCGCCTGGCGACGCGCCAAGCCTGCTGCGGCGGCTCACGGGCGAGGACGACGggccgccggcgcggcgcgcgcgcgtggACTCGTCGGACCGGGCGCTGGCGGCCGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCccacgccgccgcccgcgccgcccgccgcgccgcccgaccGCGCCTAG
- Protein Sequence
- MGLERVAEELMGRRKWKLYQDAILPKREGEQSSDDSMPSTDPPPALKIKTIEQINEDKPEERRETILESLIKRPATVPKVEMVEEPTDWKPSEKCYFCVDGETAERTGAASPASESDSSSVSGPALCKSPATAPPLLQHLLQLQLQAQSPQAIAQLQQMIATLAALGTGLVPPALSQAWLMQRLSHARLPDSTLETFQSPRDSAYGSGKPHGPLSPRLQDAEKVAAPGASPTSAEQPLDLSAKSTSSTSGTPPPDAKDTARLKRAMVDGAGAGNSSTRRTYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLTAEPPDSDPDSDPERPDSPPSVILKIPTFPPPDDKSPSPATPATPVAPVTPHLPQAQLQPSLLLPATVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPHQQAELAFMRHQQDRHVSVIKTPPENSRNFSAPSNSRASMNNNGQPATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDMKPQPPKPPPPKPMSKPFTNGMNGPETPGYPPSYFWAGAGFPAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLSGEARAPGDAPSLLRRLTGEDDGPPARRARVDSSDRALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01072366;
- 90% Identity
- iTF_00009922;
- 80% Identity
- -